prot_H-elongata_contig11419.1133.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11419.1133.1
Unique Nameprot_H-elongata_contig11419.1133.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length142
Homology
BLAST of mRNA_H-elongata_contig11419.1133.1 vs. uniprot
Match: A0A6H5JSY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSY9_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 3.300e-27
Identity = 71/151 (47.02%), Postives = 86/151 (56.95%), Query Frame = 0
Query:    1 DRAIVLPLDVRDDFILPDAVRNAEAMLGRPIDMVFHCQAG---ITSWSGS-----DFDVNHVRRHLQVMDSILWGAVGLTKAVLPSMLDRQEGHIIVLAGGSSPLLTSEGRSAE--TASRSAVQGYFDSLRAEVARDRIKIT-VVHRPGLT 140
            DR +++PLD RD FIL  A   AE ML RP+ MVFHCQ G      W        D DV     +L+       GA+ LTKAVLPSMLD QEGH++VL G  S     E  S     +S+ A +GYFD LR EV+RD +KIT V+H  G T
Sbjct:  307 DRVMIMPLDARDTFILDRAASKAEEMLDRPVGMVFHCQGGGVVAGEWDEEEEEEGDLDVEDASGNLR-------GAIALTKAVLPSMLDEQEGHLVVLGGDDSFASREETSSPAGVVSSKHAARGYFDRLRTEVSRDGVKITTVLHHSGCT 450          
BLAST of mRNA_H-elongata_contig11419.1133.1 vs. uniprot
Match: D8LHS3_ECTSI (Oxidoreductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHS3_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 1.110e-26
Identity = 69/150 (46.00%), Postives = 89/150 (59.33%), Query Frame = 0
Query:    1 DRAIVLPLDVRDDFILPDAVRNAEAMLGRPIDMVFHCQAG-ITSWSGSDFDVNHVRRHLQVMD----SILWGAVGLTKAVLPSMLDRQEGHIIVLAGGSSPLLTSEGRSAETA----SRSAVQGYFDSLRAEVARDRIKIT-VVHRPGLT 140
            DR +++PLDVRD FIL  A R AE ML RP+ MVFHCQ G + +    + D          +D      L GA+ LTKAVLPSMLD QEGH++VL G      TS   ++  A    S+ A +GYFD LR EV+RD +K+T ++H  G T
Sbjct:  371 DRVMIMPLDVRDTFILDHATRKAEDMLDRPVGMVFHCQGGGVVAGEWDEEDEXXXXXXXXDLDLEASGNLRGAISLTKAVLPSMLDEQEGHLVVLGGDD--FFTSREETSSPAGVVSSKHAARGYFDRLRREVSRDGVKVTTLLHHSGCT 518          
BLAST of mRNA_H-elongata_contig11419.1133.1 vs. uniprot
Match: UPI001A9422B9 (SDR family oxidoreductase n=1 Tax=Fibrella sp. HMF5335 TaxID=2817060 RepID=UPI001A9422B9)

HSP 1 Score: 81.6 bits (200), Expect = 5.510e-16
Identity = 57/135 (42.22%), Postives = 80/135 (59.26%), Query Frame = 0
Query:    1 DRAIVLPLDVRDDFILPDAVRNAEAMLGRPIDMVFHCQAGITSWS-GSDFDVNHVRRHLQVMDSILWGAVGLTKAVLPSMLDRQEGHIIVLAGGSSPLLTSEGRSAETASRSAVQGYFDSLRAEVARDRIKITVV 134
            D  +VLPLDV D   L + V+   A  GR +D VF   AGIT  S   D D    RR   +MD   +GAV LT+AVLP +L ++ GH +V +  +  +   + RS   AS+ A+ G+FDSLRAEVA + +++T+V
Sbjct:   53 DAVLVLPLDVTDAADLAEKVQTVLARFGR-VDYVFQ-NAGITQRSLVQDTDPVVYRR---LMDVNFFGAVALTQAVLPQLLTQKSGHFVVTSSVAGKIGVKQ-RSGYCASKHALHGFFDSLRAEVANEGLRVTIV 181          
BLAST of mRNA_H-elongata_contig11419.1133.1 vs. uniprot
Match: A0A6L9LA52_9BACT (SDR family oxidoreductase n=1 Tax=Spirosoma terrae TaxID=1968276 RepID=A0A6L9LA52_9BACT)

HSP 1 Score: 80.9 bits (198), Expect = 1.090e-15
Identity = 58/141 (41.13%), Postives = 81/141 (57.45%), Query Frame = 0
Query:    4 IVLPLDVRDDFILPDAVRNAEAMLGRPIDMVFHCQAGITSWS---GSDFDVNHVRRHLQVMDSILWGAVGLTKAVLPSMLDRQEGHIIVLAGGSSPLLTSEGRSAETASRSAVQGYFDSLRAEVARDRIKITVVHRPGLTK 141
            +VLPLD+ D   LP  V   +   GR ID +F   AGIT  S    +DF V     + ++MD   +G V LTKAVLP ML ++ GH +V +  +  L T + RS   AS+ A+ G+FDSLRAE+  + + +T+V  PG  K
Sbjct:   58 LVLPLDITDTDSLPAHVATVQQHFGR-IDYIFQ-NAGITQRSTVLDTDFSV-----YKRLMDINFFGVVALTKAVLPIMLRQRSGHFVVTSSVAGKLGTKQ-RSGYCASKHALHGFFDSLRAEIYEEGLGVTIVC-PGYIK 189          
BLAST of mRNA_H-elongata_contig11419.1133.1 vs. uniprot
Match: A0A2T3HPX3_9SPHI (Short chain dehydrogenase n=2 Tax=Pedobacter yulinensis TaxID=2126353 RepID=A0A2T3HPX3_9SPHI)

HSP 1 Score: 80.1 bits (196), Expect = 1.970e-15
Identity = 55/137 (40.15%), Postives = 82/137 (59.85%), Query Frame = 0
Query:    5 VLPLDVRDDFILPDAVRNAEAMLGRPIDMVFHCQAGITSWSGSDFDVNHVRRHLQVMDSILWGAVGLTKAVLPSMLDRQEGHIIVLAGGSSPLLTSEGRSAETASRSAVQGYFDSLRAEVARDRIKITVVHRPGLTK 141
            VLP+D+     L D   NA  + GR ID++ +  AGI S  G   + +    H ++M++  WG V L+KAVLP+M+  + GH++ ++  +  L T + RSA  AS+ A+ GYFDSLRAE+  D I +T+V  PG  K
Sbjct:   55 VLPVDLEQADTLVDKAANALRIYGR-IDLLIN-SAGI-SQRGRALETSSETEH-RIMNTNFWGTVALSKAVLPAMVAARSGHLVCISSIAGKLGT-KNRSAYAASKHALHGYFDSLRAELHADNINVTLVC-PGYIK 185          
BLAST of mRNA_H-elongata_contig11419.1133.1 vs. uniprot
Match: A0A1W6E9E5_9BACT (Short-chain dehydrogenase n=2 Tax=Fibrella TaxID=861914 RepID=A0A1W6E9E5_9BACT)

HSP 1 Score: 80.1 bits (196), Expect = 2.120e-15
Identity = 57/134 (42.54%), Postives = 77/134 (57.46%), Query Frame = 0
Query:    1 DRAIVLPLDVRDDFILPDAVRNAEAMLGRPIDMVFHCQAGITSWSGSDFDVNHVRRHLQVMDSILWGAVGLTKAVLPSMLDRQEGHIIVLAGGSSPLLTSEGRSAETASRSAVQGYFDSLRAEVARDRIKITVV 134
            DR ++LPLDV D+  +P  V       GR ID VF   AGIT  S  +     V R L  M+   +G V LT+AVLP ML ++ GH +V +  S  +   + RS   AS+ A+ G+FDSLRAEVA D + +T+V
Sbjct:   54 DRIMILPLDVTDETSIPALVAAVLVRFGR-IDYVFQ-NAGITQRSFVNDTNFAVYRRL--MEVNFFGVVALTQAVLPVMLGQKSGHFVVTSSVSGKIGVKQ-RSGYCASKHALHGFFDSLRAEVASDGLHVTLV 182          
BLAST of mRNA_H-elongata_contig11419.1133.1 vs. uniprot
Match: A0A6M1TGK5_9BACT (SDR family oxidoreductase n=1 Tax=Aliifodinibius halophilus TaxID=1736908 RepID=A0A6M1TGK5_9BACT)

HSP 1 Score: 79.7 bits (195), Expect = 2.910e-15
Identity = 57/138 (41.30%), Postives = 83/138 (60.14%), Query Frame = 0
Query:    5 VLPLDVRDDFILPDAVRNAEAMLGRPIDMVFHCQAGITSWSG-SDFDVNHVRRHLQVMDSILWGAVGLTKAVLPSMLDRQEGHIIVLAGGSSPLLTSEGRSAETASRSAVQGYFDSLRAEVARDRIKITVVHRPGLTK 141
            +LP+D+ +   LP+  R A    G+ ID +F+   GI+  S  ++ D+   R+   VM+   +G+V LTK VLPSM+DRQ GHIIV +       T   RS+  AS+ A+ GYFDSLR EV +D I++++V  PG  K
Sbjct:   58 ILPIDLAEAEALPEKARQALDTFGQ-IDYLFN-NGGISQRSKVTETDMEVTRK---VMEINFFGSVALTKTVLPSMIDRQTGHIIVTSSVMGKFGTRL-RSSYAASKHALHGYFDSLRQEVHKDNIRVSLVC-PGYIK 188          
BLAST of mRNA_H-elongata_contig11419.1133.1 vs. uniprot
Match: UPI001A94446E (SDR family oxidoreductase n=1 Tax=Fibrella sp. HMF5405 TaxID=2817061 RepID=UPI001A94446E)

HSP 1 Score: 79.3 bits (194), Expect = 4.120e-15
Identity = 54/134 (40.30%), Postives = 79/134 (58.96%), Query Frame = 0
Query:    1 DRAIVLPLDVRDDFILPDAVRNAEAMLGRPIDMVFHCQAGITSWSGSDFDVNHVRRHLQVMDSILWGAVGLTKAVLPSMLDRQEGHIIVLAGGSSPLLTSEGRSAETASRSAVQGYFDSLRAEVARDRIKITVV 134
            D+ ++LPLDV D+  +P+ V +     G+ ID VF   AGI+  S        V R L  M+   +GAV LT+A LP ML +++GH +V +  S  +   + RS   AS+ A+ G+FDSLRAEVA D + +T+V
Sbjct:   54 DQLLILPLDVTDEASIPERVNDVLIRFGK-IDYVF-LNAGISQRSFVQETNFAVYRRL--MEVNFFGAVALTQAALPVMLAQKKGHFVVTSSVSGKIGVRQ-RSGYCASKHALHGFFDSLRAEVANDGLNVTIV 182          
BLAST of mRNA_H-elongata_contig11419.1133.1 vs. uniprot
Match: A0A2K8Z8U8_9BACT (Short chain dehydrogenase n=1 Tax=Spirosoma pollinicola TaxID=2057025 RepID=A0A2K8Z8U8_9BACT)

HSP 1 Score: 79.0 bits (193), Expect = 5.900e-15
Identity = 55/134 (41.04%), Postives = 78/134 (58.21%), Query Frame = 0
Query:    4 IVLPLDVRDDFILPDAVRNAEAMLGRPIDMVFHCQAGITSWSG---SDFDVNHVRRHLQVMDSILWGAVGLTKAVLPSMLDRQEGHIIVLAGGSSPLLTSEGRSAETASRSAVQGYFDSLRAEVARDRIKITVV 134
            +VLP+D+ +   LPD V       GR ID VF   AGIT  S    +DF V     + ++MD   +G V LTKA+LP ML +Q+G+ IV +  +  L T + RS   AS+ A+ G+FDSLRAE     +++T+V
Sbjct:   60 LVLPMDMSNIESLPDCVEAVRQRFGR-IDYVFQ-NAGITQRSAVVDTDFSV-----YKRIMDVNFFGVVALTKAILPIMLAQQKGYFIVTSSVAGKLATKQ-RSGYCASKHALHGFFDSLRAETHAAGLRVTLV 185          
BLAST of mRNA_H-elongata_contig11419.1133.1 vs. uniprot
Match: A0A258WSC5_9SPHI (Short chain dehydrogenase n=2 Tax=Sphingobacteriia TaxID=117747 RepID=A0A258WSC5_9SPHI)

HSP 1 Score: 78.6 bits (192), Expect = 7.790e-15
Identity = 52/138 (37.68%), Postives = 84/138 (60.87%), Query Frame = 0
Query:    5 VLPLDVRDDFILPDAVRNAEAMLGRPIDMVFHCQAGITSWS-GSDFDVNHVRRHLQVMDSILWGAVGLTKAVLPSMLDRQEGHIIVLAGGSSPLLTSEGRSAETASRSAVQGYFDSLRAEVARDRIKITVVHRPGLTK 141
            VLPLD+ +   L D    A  + GR +D++ H   G++  S   D D++  ++   +M+   WGA+ LTKA++PSM+  Q GHI++++       T + RSA +AS+ A+ GYFDSLR+E+   +IKI+++  PG  K
Sbjct:   58 VLPLDLENTLELEDKAMAALKIFGR-VDIIIH-SGGVSQRSLAMDTDLDVAKK---IMNINFWGAIALTKALIPSMISNQSGHIVIISSLVGKFGT-KFRSAYSASKHALHGYFDSLRSEID-PKIKISIIC-PGFIK 187          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11419.1133.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JSY9_9PHAE3.300e-2747.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHS3_ECTSI1.110e-2646.00Oxidoreductase n=1 Tax=Ectocarpus siliculosus TaxI... [more]
UPI001A9422B95.510e-1642.22SDR family oxidoreductase n=1 Tax=Fibrella sp. HMF... [more]
A0A6L9LA52_9BACT1.090e-1541.13SDR family oxidoreductase n=1 Tax=Spirosoma terrae... [more]
A0A2T3HPX3_9SPHI1.970e-1540.15Short chain dehydrogenase n=2 Tax=Pedobacter yulin... [more]
A0A1W6E9E5_9BACT2.120e-1542.54Short-chain dehydrogenase n=2 Tax=Fibrella TaxID=8... [more]
A0A6M1TGK5_9BACT2.910e-1541.30SDR family oxidoreductase n=1 Tax=Aliifodinibius h... [more]
UPI001A94446E4.120e-1540.30SDR family oxidoreductase n=1 Tax=Fibrella sp. HMF... [more]
A0A2K8Z8U8_9BACT5.900e-1541.04Short chain dehydrogenase n=1 Tax=Spirosoma pollin... [more]
A0A258WSC5_9SPHI7.790e-1537.68Short chain dehydrogenase n=2 Tax=Sphingobacteriia... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 1..141
e-value: 1.0E-17
score: 66.1
NoneNo IPR availablePANTHERPTHR44196FAMILY NOT NAMEDcoord: 2..137
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 2..139
e-value: 1.5E-14
score: 53.9
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 2..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11419contigH-elongata_contig11419:1256..2577 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11419.1133.1mRNA_H-elongata_contig11419.1133.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11419 1256..2577 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11419.1133.1 ID=prot_H-elongata_contig11419.1133.1|Name=mRNA_H-elongata_contig11419.1133.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=142bp
DRAIVLPLDVRDDFILPDAVRNAEAMLGRPIDMVFHCQAGITSWSGSDFD
VNHVRRHLQVMDSILWGAVGLTKAVLPSMLDRQEGHIIVLAGGSSPLLTS
EGRSAETASRSAVQGYFDSLRAEVARDRIKITVVHRPGLTK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR036291NAD(P)-bd_dom_sf