prot_H-elongata_contig11414.1130.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11414.1130.1
Unique Nameprot_H-elongata_contig11414.1130.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length192
Homology
BLAST of mRNA_H-elongata_contig11414.1130.1 vs. uniprot
Match: D7FRG3_ECTSI (PObg2, plastid Obg/CgtA-like GTPase 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRG3_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 1.050e-48
Identity = 107/191 (56.02%), Postives = 123/191 (64.40%), Query Frame = 0
Query:    6 PCRRTFGLVGSTRAVMSHILAGKIAVLALLISRAQGLRITPALFSHNAKHSLSLS---SPLPGYGTISTFYRRKSQGWTV-LNVVSRTVRRRCRWSDVSGLMMVNPEGTQQLRDRDLEFMFYDEAQVYVRGGSGGQGAASFRVMAKKQRGQPNGGSGGKGGDVTLVCEEGLNTLVNLRGNPSFVADRGGAG 192
            PC+R  G++ +  A      A     L LL+ +A+GL + PA F HNA    S     +  P     ++  R  S G         + VRRR R      L M NPEGTQQLRDRDLEFMFYDEAQVYVRGGSGG+GAASF+VMAKKQRGQPNGGSGGKGGDV+LVCE  LNTLVNLRG  SFVA +G AG
Sbjct:    4 PCKRRRGILSNESARAPRRSAT--VALVLLLCQARGLVVAPAFFPHNAAAGGSTQHRHTAAPLIHARASRIRPSSTGAVAAFRRGQQRVRRRSR------LEMANPEGTQQLRDRDLEFMFYDEAQVYVRGGSGGEGAASFKVMAKKQRGQPNGGSGGKGGDVSLVCESSLNTLVNLRGTMSFVAQKGTAG 186          
BLAST of mRNA_H-elongata_contig11414.1130.1 vs. uniprot
Match: A0A0G4EJ13_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EJ13_VITBC)

HSP 1 Score: 98.6 bits (244), Expect = 1.490e-20
Identity = 49/90 (54.44%), Postives = 64/90 (71.11%), Query Frame = 0
Query:  103 MMVNPEGTQQLRDRDLEFMFYDEAQVYVRGGSGGQGAASFRVMAKKQRGQPNGGSGGKGGDVTLVCEEGLNTLVNLRGNPSFVADRGGAG 192
            MMVN EG+ + +D+ L+  FYD+A VYVRGGSGG GA +F+ +  + +G PNGGSGG+GG V L+C+  +NTL  LRG  SF A  G AG
Sbjct:   39 MMVNVEGSLK-KDKRLDLQFYDQADVYVRGGSGGPGAVTFKPLRGRGQGPPNGGSGGRGGSVYLLCDNKMNTLQGLRGRASFRASHGEAG 127          
BLAST of mRNA_H-elongata_contig11414.1130.1 vs. uniprot
Match: W7TU44_9STRA (Gtp-binding protein obg (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TU44_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.350e-19
Identity = 46/86 (53.49%), Postives = 61/86 (70.93%), Query Frame = 0
Query:  104 MVNPEGTQQLRDRDLEFMFYDEAQVYVRGGSGGQGAASFRVMAKKQRGQPNGGSGGKGGDVTLVCEEGLNTLVNLRGNPSFVADRG 189
            MVN E    LR+ D EF F+D+AQ+YVR GSGG GAA+F+++  +Q+G  +GGSGGKGGDV  +C+  +NTL   RG  SF A+ G
Sbjct:  124 MVNEERLG-LRNVDPEFAFFDQAQMYVRAGSGGAGAATFKLLNGRQKGMADGGSGGKGGDVVFICDRKINTLQAFRGRASFHAENG 208          
BLAST of mRNA_H-elongata_contig11414.1130.1 vs. uniprot
Match: A0A4D9CQ36_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQ36_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.300e-18
Identity = 47/86 (54.65%), Postives = 61/86 (70.93%), Query Frame = 0
Query:  104 MVNPEGTQQLRDRDLEFMFYDEAQVYVRGGSGGQGAASFRVMAKKQRGQPNGGSGGKGGDVTLVCEEGLNTLVNLRGNPSFVADRG 189
            MVN E    LR+ D EF F+D+AQ+YVR GSGG GAA+F+++  +Q+G  +GGSGGKGGDV  VC+  +NTL   RG  SF A+ G
Sbjct:    1 MVNEERLG-LRNVDPEFAFFDQAQMYVRAGSGGAGAATFKLLNGRQKGMADGGSGGKGGDVVFVCDRKINTLQAFRGRASFHAENG 85          
BLAST of mRNA_H-elongata_contig11414.1130.1 vs. uniprot
Match: A0A836CHG5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHG5_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 2.640e-17
Identity = 51/93 (54.84%), Postives = 61/93 (65.59%), Query Frame = 0
Query:  102 LMMVNPEGTQQ-LRDRD----LEFMFYDEAQVYVRGGSGGQGAASFRVMAKKQRGQPNGGSGGKGGDVTLVCEEGLNTLVNLRGNPSFVADRG 189
            L M NPE T+  LRD+D    LEF F+DEAQ+YVRGG+GGQGA++F++ AK QR           G+V L C  GLNTL  LRG  SFVAD G
Sbjct:  203 LRMANPEATRGVLRDKDGDVNLEFQFFDEAQLYVRGGAGGQGASAFKLAAKGQRXXXXXXXXXXXGNVVLECVGGLNTLGELRGVASFVADNG 295          
BLAST of mRNA_H-elongata_contig11414.1130.1 vs. uniprot
Match: A0A7C6NT58_9FIRM (GTPase Obg n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6NT58_9FIRM)

HSP 1 Score: 79.7 bits (195), Expect = 4.430e-14
Identity = 38/69 (55.07%), Postives = 47/69 (68.12%), Query Frame = 0
Query:  121 MFYDEAQVYVRGGSGGQGAASFRVMAKKQRGQPNGGSGGKGGDVTLVCEEGLNTLVNLRGNPSFVADRG 189
            MFYD A+++V+GG GG G  SFR      RG PNGG GG+GGDV  V +EGL+TLV+ R    F A+RG
Sbjct:    1 MFYDTAKIFVKGGDGGNGCISFRREKYVPRGGPNGGDGGRGGDVVFVADEGLHTLVDFRYRAHFKAERG 69          
BLAST of mRNA_H-elongata_contig11414.1130.1 vs. uniprot
Match: A0A661KH56_9DELT (GTPase ObgE (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661KH56_9DELT)

HSP 1 Score: 73.6 bits (179), Expect = 5.590e-14
Identity = 37/71 (52.11%), Postives = 48/71 (67.61%), Query Frame = 0
Query:  122 FYDEAQVYVRGGSGGQGAASFRVMAKKQRGQPNGGSGGKGGDVTLVCEEGLNTLVNLRGNPSFVADRGGAG 192
            F DE +++V+GG GG+G  SFR      RG P+GG  GKGGDV LV +EGL+TL++LR   S+ A  GG G
Sbjct:    3 FVDEVKIWVKGGDGGKGCVSFRREKFIPRGGPDGGDXGKGGDVILVAKEGLSTLLDLRYQQSYRAQNGGHG 73          
BLAST of mRNA_H-elongata_contig11414.1130.1 vs. uniprot
Match: A0A2E7I5Y3_9PROT (GTPase Obg n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E7I5Y3_9PROT)

HSP 1 Score: 79.0 bits (193), Expect = 5.590e-14
Identity = 38/68 (55.88%), Postives = 46/68 (67.65%), Query Frame = 0
Query:  122 FYDEAQVYVRGGSGGQGAASFRVMAKKQRGQPNGGSGGKGGDVTLVCEEGLNTLVNLRGNPSFVADRG 189
            F D+A+VY+R G GG G  SFR  A   RG P+GG GG+GGDV  VC EGLNTL++ R    F A+RG
Sbjct:    3 FLDQAKVYLRSGDGGNGCISFRREANVPRGGPDGGDGGRGGDVVAVCVEGLNTLIDYRYRQHFKAERG 70          
BLAST of mRNA_H-elongata_contig11414.1130.1 vs. uniprot
Match: A0A7V5V3N4_9GAMM (GTPase ObgE (Fragment) n=2 Tax=root TaxID=1 RepID=A0A7V5V3N4_9GAMM)

HSP 1 Score: 77.4 bits (189), Expect = 1.130e-13
Identity = 38/71 (53.52%), Postives = 50/71 (70.42%), Query Frame = 0
Query:  122 FYDEAQVYVRGGSGGQGAASFRVMAKKQRGQPNGGSGGKGGDVTLVCEEGLNTLVNLRGNPSFVADRGGAG 192
            F DEA++ VR G GG G+ASFR    + +G P+GG GGKGGD+ LV +EGLNTL++ R   +F A RG +G
Sbjct:    3 FVDEAKIVVRAGHGGSGSASFRREKFEPKGGPDGGDGGKGGDIILVGDEGLNTLIDFRHKKNFEAQRGVSG 73          
BLAST of mRNA_H-elongata_contig11414.1130.1 vs. uniprot
Match: A0A7C1TT17_9PROT (GTPase ObgE (Fragment) n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A7C1TT17_9PROT)

HSP 1 Score: 77.4 bits (189), Expect = 1.150e-13
Identity = 37/71 (52.11%), Postives = 46/71 (64.79%), Query Frame = 0
Query:  122 FYDEAQVYVRGGSGGQGAASFRVMAKKQRGQPNGGSGGKGGDVTLVCEEGLNTLVNLRGNPSFVADRGGAG 192
            F DEA+++V+ G GG G  SFR  A   RG PNGG+GG+GGDV   C +GLNTL++ R    F A RG  G
Sbjct:    3 FLDEAKIFVKSGDGGDGCVSFRREANVPRGGPNGGNGGRGGDVAAECVDGLNTLIDFRYQQHFKAGRGANG 73          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11414.1130.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRG3_ECTSI1.050e-4856.02PObg2, plastid Obg/CgtA-like GTPase 2 n=2 Tax=Ecto... [more]
A0A0G4EJ13_VITBC1.490e-2054.44Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
W7TU44_9STRA1.350e-1953.49Gtp-binding protein obg (Fragment) n=2 Tax=Nannoch... [more]
A0A4D9CQ36_9STRA1.300e-1854.65Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A836CHG5_9STRA2.640e-1754.84Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7C6NT58_9FIRM4.430e-1455.07GTPase Obg n=1 Tax=Firmicutes bacterium TaxID=1879... [more]
A0A661KH56_9DELT5.590e-1452.11GTPase ObgE (Fragment) n=1 Tax=Deltaproteobacteria... [more]
A0A2E7I5Y3_9PROT5.590e-1455.88GTPase Obg n=2 Tax=Alphaproteobacteria TaxID=28211... [more]
A0A7V5V3N4_9GAMM1.130e-1353.52GTPase ObgE (Fragment) n=2 Tax=root TaxID=1 RepID=... [more]
A0A7C1TT17_9PROT1.150e-1352.11GTPase ObgE (Fragment) n=1 Tax=Rhodospirillales ba... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036726GTP1/OBG domain superfamilyGENE3D2.70.210.12coord: 118..192
e-value: 3.3E-19
score: 70.8
IPR036726GTP1/OBG domain superfamilySUPERFAMILY82051Obg GTP-binding protein N-terminal domaincoord: 121..192
IPR006169GTP1/OBG domainPFAMPF01018GTP1_OBGcoord: 124..192
e-value: 1.4E-16
score: 60.5
NoneNo IPR availablePANTHERPTHR11702DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATEDcoord: 114..192
NoneNo IPR availablePANTHERPTHR11702:SF31GTPASE MTG2, MITOCHONDRIALcoord: 114..192
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..37
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11414contigH-elongata_contig11414:2043..7759 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11414.1130.1mRNA_H-elongata_contig11414.1130.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11414 2043..7782 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11414.1130.1 ID=prot_H-elongata_contig11414.1130.1|Name=mRNA_H-elongata_contig11414.1130.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=192bp
MAGSSPCRRTFGLVGSTRAVMSHILAGKIAVLALLISRAQGLRITPALFS
HNAKHSLSLSSPLPGYGTISTFYRRKSQGWTVLNVVSRTVRRRCRWSDVS
GLMMVNPEGTQQLRDRDLEFMFYDEAQVYVRGGSGGQGAASFRVMAKKQR
GQPNGGSGGKGGDVTLVCEEGLNTLVNLRGNPSFVADRGGAG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036726GTP1_OBG_dom_sf
IPR006169GTP1_OBG_dom