prot_H-elongata_contig114023.1119.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig114023.1119.1
Unique Nameprot_H-elongata_contig114023.1119.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length143
Homology
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BLAST of mRNA_H-elongata_contig114023.1119.1 vs. uniprot
Match: D7FJY9_ECTSI (Palmitoyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJY9_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 6.310e-21
Identity = 90/159 (56.60%), Postives = 99/159 (62.26%), Query Frame = 0 
Query:    1 RLITYLAFLWINLTLGWSIL--------PGSIFYRGWFLLLLGIMTTLSLVSLTTTDPGSVRSSESNQPYAGSNAASEGGNQSAQVR--------ARASYSSCGEARESCQQYFTQFCSLCNYAKPERAHHXXXXXXXXXXXXXXXXXXXXXVGAGNYK 143
            RL  YLAFLW N  LGW+ L        P S F+R W+LLLL  +TTLSLV+LTT DPG+VR S +    AGS+ +  G                A  S    G      QQYFTQ CSLCNY KP RAHHXXXXXXXXXXXXXXXXXXXXXVGAGNYK
Sbjct:    4 RLAGYLAFLWANAALGWTFLRESAAGGTPLSAFFRAWWLLLLSALTTLSLVTLTTKDPGNVRKSTA---QAGSSPSGMGXXXXXXXXXXXXQLCPASGSLEGAGGGLAQQQQYFTQVCSLCNYLKPARAHHXXXXXXXXXXXXXXXXXXXXXVGAGNYK 159
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig114023.1119.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJY9_ECTSI6.310e-2156.60Palmitoyltransferase n=2 Tax=Ectocarpus TaxID=2879... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001594Palmitoyltransferase, DHHC domainPFAMPF01529DHHCcoord: 96..143
e-value: 1.4E-20
score: 73.8
NoneNo IPR availablePANTHERPTHR22883:SF147PALMITOYLTRANSFERASEcoord: 18..143
NoneNo IPR availablePANTHERPTHR22883ZINC FINGER DHHC DOMAIN CONTAINING PROTEINcoord: 18..143
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 26..45
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 46..143
NoneNo IPR availablePROSITEPS50216DHHCcoord: 100..143
score: 24.795
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig114023contigH-elongata_contig114023:256..1592 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig114023.1119.1mRNA_H-elongata_contig114023.1119.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig114023 256..1592 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig114023.1119.1 ID=prot_H-elongata_contig114023.1119.1|Name=mRNA_H-elongata_contig114023.1119.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=143bp
RLITYLAFLWINLTLGWSILPGSIFYRGWFLLLLGIMTTLSLVSLTTTDP
GSVRSSESNQPYAGSNAASEGGNQSAQVRARASYSSCGEARESCQQYFTQ
FCSLCNYAKPERAHHCRICNRCVLKMDHHCRWVGRCVGAGNYK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001594Palmitoyltrfase_DHHC