prot_H-elongata_contig113757.1098.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig113757.1098.1
Unique Name	prot_H-elongata_contig113757.1098.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	143

Homology

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BLAST of mRNA_H-elongata_contig113757.1098.1 vs. uniprot
Match: D8LFP4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP4_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 4.090e-38
Identity = 78/120 (65.00%), Postives = 89/120 (74.17%), Query Frame = 0

Query:   15 DRGERSRKTLRGLAVGALTAELSCEGVLMWWWKRWESSYPLLARAARVVFGAPASSAVLERDFSNAGRMMTSSRSSTDVKYVDMILFLRGNLDLISEDIAELPADGVNSAQSKIPGRLSN 134
            +R     +TLR  +  AL  + SCEGVL WW KR E SYPLLAR ARVVF APAS  V ERD  +AGRMMTSSRS+ D KYV+M+LFL GN+DL+ E I ELPADGVN  Q+KIPGRLSN
Sbjct:  623 ERARAELETLRSASDDALFGDTSCEGVLNWW-KRKEHSYPLLARVARVVFAAPASVMVQERDLGSAGRMMTSSRSTGDAKYVEMVLFLHGNVDLLPEIIPELPADGVNGVQTKIPGRLSN 741

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BLAST of mRNA_H-elongata_contig113757.1098.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 9.350e-37
Identity = 77/113 (68.14%), Postives = 89/113 (78.76%), Query Frame = 0

Query:   22 KTLRGLAVGALTAELSCEGVLMWWWKRWESSYPLLARAARVVFGAPASSAVLERDFSNAGRMMTSSRSSTDVKYVDMILFLRGNLDLISEDIAELPADGVNSAQSKIPGRLSN 134
            +TLRG+  G LT +LSCEGVL WW K+W   YPLLARAARVVFGAPAS+AVLERDF++A  MM SSRS+ D KYV+M+LFL GNLDLI E I EL  + V   Q+KIPGRLSN
Sbjct:  528 ETLRGVEAGTLTDDLSCEGVLEWW-KKWGRLYPLLARAARVVFGAPASAAVLERDFTDAWCMMASSRSAGDAKYVEMVLFLHGNLDLIPEQIPELRDEDV---QAKIPGRLSN 636

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BLAST of mRNA_H-elongata_contig113757.1098.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 1.440e-35
Identity = 75/111 (67.57%), Postives = 87/111 (78.38%), Query Frame = 0

Query:   24 LRGLAVGALTAELSCEGVLMWWWKRWESSYPLLARAARVVFGAPASSAVLERDFSNAGRMMTSSRSSTDVKYVDMILFLRGNLDLISEDIAELPADGVNSAQSKIPGRLSN 134
            LR +  G+L   LSCE VL WW K W  +YPLLAR ARVVFGAPAS+AVLERDFSNAGRMMTSSRS+ D KYV+MI+FL GNLDLI EDI +L      +A++KIPGRL+N
Sbjct:  590 LRAVQGGSLAPGLSCEDVLKWW-KMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEA---AARTKIPGRLAN 696

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BLAST of mRNA_H-elongata_contig113757.1098.1 vs. uniprot
Match: A0A6H5L5L6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L6_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 4.180e-34
Identity = 64/79 (81.01%), Postives = 70/79 (88.61%), Query Frame = 0

Query:   35 ELSCEGVLMWWWKRWESSYPLLARAARVVFGAPASSAVLERDFSNAGRMMTSSRSSTDVKYVDMILFLRGNLDLISEDI 113
            ELSC+ VL WW KRW SSYPLLARAARVVFGAPAS+AVLE DF +AGR+MTSSRS+TD KYV+MILFL GNLDLI EDI
Sbjct:   31 ELSCDSVLKWW-KRWMSSYPLLARAARVVFGAPASAAVLEGDFGDAGRIMTSSRSTTDAKYVEMILFLHGNLDLIPEDI 108

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BLAST of mRNA_H-elongata_contig113757.1098.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 2.820e-33
Identity = 74/111 (66.67%), Postives = 85/111 (76.58%), Query Frame = 0

Query:   24 LRGLAVGALTAELSCEGVLMWWWKRWESSYPLLARAARVVFGAPASSAVLERDFSNAGRMMTSSRSSTDVKYVDMILFLRGNLDLISEDIAELPADGVNSAQSKIPGRLSN 134
            LR +  G+L A L CE VL WW K W  +YPLLAR ARVV GA AS+AVLE DFSNAGRMMTSSRS+ D KYV+MILFL GNLDLI EDI +L  + V  A++KIPGRL+N
Sbjct:  363 LRAVQGGSLAAGLRCEDVLKWW-KMWAHAYPLLARVARVVIGALASAAVLEHDFSNAGRMMTSSRSTMDSKYVEMILFLHGNLDLIPEDITKL-TEAV--ARTKIPGRLAN 469

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BLAST of mRNA_H-elongata_contig113757.1098.1 vs. uniprot
Match: A0A6H5JML0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML0_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 2.810e-32
Identity = 70/118 (59.32%), Postives = 82/118 (69.49%), Query Frame = 0

Query:   24 LRGLAVGALTAELSCEGVLMWWWKRWESSYPLLARAARVVFGAPASSAVLERDFSNAGRMMTSSRSSTDVKYVDMILFLRGNLDLISEDIAELPADGVNSAQSKIPGRLSNSSRCIRP 141
            LR +  G L A L CE VL WW K W  +YPLLAR ARVVFGAPAS+AVLE  FSNAGRM TSSRS+ D  YV+MI+FL GNL+LI EDI +L       A++K PGRL+N    + P
Sbjct:  126 LRAVQGGRLAARLRCEDVLKWW-KMWAHAYPLLARVARVVFGAPASAAVLECYFSNAGRMTTSSRSTMDSTYVEMIMFLHGNLNLIPEDITKLTEV---VARTKFPGRLANPVDGLEP 239

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BLAST of mRNA_H-elongata_contig113757.1098.1 vs. uniprot
Match: A0A6H5KCJ3_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ3_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 1.420e-28
Identity = 63/87 (72.41%), Postives = 70/87 (80.46%), Query Frame = 0

Query:   49 WESSYPLLARAARVVFGAPASSAVLERDFSNAGRMMTSSRSSTD-VKYVDMILFLRGNLDLISEDIAELPADGVNSAQSKIPGRLSN 134
            W   YPLLAR ARVVFGAPAS+AVLERDFSNAGRMMTSSR + D   YV+MILFL GNLDLI EDI +L  + V  A+SKIPGRL+N
Sbjct:    2 WAHVYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRRTMDSTTYVEMILFLHGNLDLIPEDITKL-TEAV--ARSKIPGRLAN 85

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BLAST of mRNA_H-elongata_contig113757.1098.1 vs. uniprot
Match: A0A6H5KGU9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGU9_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 2.620e-23
Identity = 58/101 (57.43%), Postives = 64/101 (63.37%), Query Frame = 0

Query:   35 ELSCEGVLMWWWKRWESSYPLLARAARVVFGAPASSAVLERDFSNAGRMMTSSRSSTDVKYVDMILFLRGNLDLISEDIAELPADGVNSAQSK-IPGRLSN 134
            ELSCE VL WW KRW SSYPLLARA RVVFGAPAS+A                       YV+MILFL GNLDLI +DI  LP DG +SA +K +PGRL N
Sbjct:   31 ELSCESVLKWW-KRWMSSYPLLARATRVVFGAPASAA-----------------------YVEMILFLHGNLDLIPDDIPALPTDGPDSATNKHMPGRLKN 107

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BLAST of mRNA_H-elongata_contig113757.1098.1 vs. uniprot
Match: A0A6H5KW12_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW12_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 4.000e-23
Identity = 57/84 (67.86%), Postives = 65/84 (77.38%), Query Frame = 0

Query:   52 SYPLLARAARVVFGAPASSAVLERDFSNAGRMMTSSRSSTDVKY-VDMILFLRGNLDLISEDIAELPADGVNSAQSKIPGRLSN 134
            +Y LL   ARVVFGAPAS+A LERDFSNAGRMMTSSRS+ D KY V+MILFL GNLDLI EDI  L  + V  A++  PGRL+N
Sbjct:    5 AYLLLTGVARVVFGAPASAAALERDFSNAGRMMTSSRSAMDSKYYVEMILFLHGNLDLIPEDITTL-TEAV--ARTMFPGRLAN 85

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BLAST of mRNA_H-elongata_contig113757.1098.1 vs. uniprot
Match: A0A6H5KEK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK6_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 3.980e-22
Identity = 59/113 (52.21%), Postives = 71/113 (62.83%), Query Frame = 0

Query:   22 KTLRGLAVGALTAELSCEGVLMWWWKRWESSYPLLARAARVVFGAPASSAVLERDFSNAGRMMTSSRSSTDVKYVDMILFLRGNLDLISEDIAELPADGVNSAQSKIPGRLSN 134
            +TLRG+  G+LT +L CEGVL WW ++WE SYPLLARAARV FGAPA           AG          D KYV+M+LFL G LDL  E I EL  + +++   KIPGRLSN
Sbjct:  327 ETLRGVEAGSLTDDLGCEGVLKWW-EKWEGSYPLLARAARVDFGAPA-----------AG----------DAKYVEMVLFLHGKLDLFPEQIPELRDEDIHA---KIPGRLSN 414

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig113757.1098.1 vs. uniprot

BLAST of mRNA_H-elongata_contig113757.1098.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LFP4_ECTSI	4.090e-38	65.00	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
D8LBK4_ECTSI	9.350e-37	68.14	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JZ82_9PHAE	1.440e-35	67.57	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5L5L6_9PHAE	4.180e-34	81.01	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JNY1_9PHAE	2.820e-33	66.67	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JML0_9PHAE	2.810e-32	59.32	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KCJ3_9PHAE	1.420e-28	72.41	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KGU9_9PHAE	2.620e-23	57.43	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KW12_9PHAE	4.000e-23	67.86	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KEK6_9PHAE	3.980e-22	52.21	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 44..106 e-value: 9.8E-14 score: 50.9
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 74..142
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 52..73
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..25
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 26..46
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 47..51
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 45..108

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig113757	contig	H-elongata_contig113757:660..1088 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig113757.1098.1	mRNA_H-elongata_contig113757.1098.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig113757 498..1811 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig113757.1098.1 ID=prot_H-elongata_contig113757.1098.1|Name=mRNA_H-elongata_contig113757.1098.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=143bp
MSIIHMIHRALNEDDRGERSRKTLRGLAVGALTAELSCEGVLMWWWKRWE
SSYPLLARAARVVFGAPASSAVLERDFSNAGRMMTSSRSSTDVKYVDMIL
FLRGNLDLISEDIAELPADGVNSAQSKIPGRLSNSSRCIRPR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008906	HATC_C_dom
IPR012337	RNaseH-like_sf