prot_H-elongata_contig11371.1094.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11371.1094.1
Unique Nameprot_H-elongata_contig11371.1094.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length131
Homology
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BLAST of mRNA_H-elongata_contig11371.1094.1 vs. uniprot
Match: D7FVX0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVX0_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 3.600e-37
Identity = 82/133 (61.65%), Postives = 92/133 (69.17%), Query Frame = 0 
Query:    1 MDIGYRDR-ELTASDGVRRSEEATAAAMS-WEMAEQPAGGQGIEGVWEEKEMGGVERERWGEGEVGEYYG-ADEAVEMSALVVTLRQYPDAWGAFVDLHDGMGFRFCGTWDLKPPRTAVKTVVMDHILRIVMD 130
            +DIGYRD  E    +  R S+EA AA    W       G    EG   EKE+      RWGEGEVGE+ G ADEA EM+AL VTLRQYPDAW AFVDLHDG+GFR CGTWD +PPR+AVKTVVMDHILRI+MD
Sbjct:  579 LDIGYRDSTEWEEMEDERLSDEAAAAXXXXWSEXXXXXG----EGSLREKEL------RWGEGEVGEWDGEADEAAEMAALAVTLRQYPDAWEAFVDLHDGVGFRLCGTWDREPPRSAVKTVVMDHILRIIMD 701
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BLAST of mRNA_H-elongata_contig11371.1094.1 vs. uniprot
Match: A0A6H5JJW2_9PHAE (DUF1995 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJW2_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 2.030e-32
Identity = 75/136 (55.15%), Postives = 87/136 (63.97%), Query Frame = 0 
Query:    1 MDIGYRDR-ELTASDGVRRSEEATAAAMSWEMAEQPAGGQGIEGVWEEKEMG----GVERERWGEGEVGEYYG-ADEAVEMSALVVTLRQYPDAWGAFVDLHDGMGFRFCGTWDLKPPRTAVKTVVMDHILRIVMD 130
            +DIGYRDR E    +  R S+EA AAA++                W E+E G              EVGE+ G ADEA EM+AL VTLRQYPDAW AFVDLHDG+GFR CGTWD +PP +AVKTVVMDHILRI+MD
Sbjct:  535 LDIGYRDRSEWDEMEDERLSDEAAAAALA---------------AWSEEEEGEXXXXXXXXXXXXXEVGEWDGEADEAAEMAALAVTLRQYPDAWEAFVDLHDGVGFRLCGTWDREPPPSAVKTVVMDHILRIIMD 655
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11371.1094.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FVX0_ECTSI3.600e-3761.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJW2_9PHAE2.030e-3255.15DUF1995 domain-containing protein n=1 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11371contigH-elongata_contig11371:2550..3141 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11371.1094.1mRNA_H-elongata_contig11371.1094.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11371 2550..3153 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11371.1094.1 ID=prot_H-elongata_contig11371.1094.1|Name=mRNA_H-elongata_contig11371.1094.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=131bp
MDIGYRDRELTASDGVRRSEEATAAAMSWEMAEQPAGGQGIEGVWEEKEM
GGVERERWGEGEVGEYYGADEAVEMSALVVTLRQYPDAWGAFVDLHDGMG
FRFCGTWDLKPPRTAVKTVVMDHILRIVMD*
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