prot_H-elongata_contig11367.1091.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11367.1091.1
Unique Nameprot_H-elongata_contig11367.1091.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length161
Homology
BLAST of mRNA_H-elongata_contig11367.1091.1 vs. uniprot
Match: D8LPV2_ECTSI (Nucleotidyltransferase family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV2_ECTSI)

HSP 1 Score: 232 bits (592), Expect = 2.680e-72
Identity = 113/161 (70.19%), Postives = 131/161 (81.37%), Query Frame = 0
Query:    1 RSATPPWYRSESIARGFPLRTLHNEILDLCDLLMPTPEEKARTAIAITYVKRVVRETLGGNAKVHIFGSQLTGLVLPNSDVDTVVAGAPFNSIQNLGRAMFRRSRQEEVHDVVVIAKARVPIVKFVHAKTGVHVDVCFDQSSGLKSGAAARVLMRQMPQVR 161
            R+  PPWYR  S+ +GFPLRTLHNEILDLCDLLMPTPEEKA+TAIAITY+KRVV ETLG  A+V IFGSQLTGLVLP+SD+D+VV G P  S+ +LG AM+RR  + EV +V VI  ARVP+VKFVH  +GV VDVCFDQ SG+KSG AAR +MRQM  VR
Sbjct:  244 RNLRPPWYRESSVEQGFPLRTLHNEILDLCDLLMPTPEEKAKTAIAITYIKRVVEETLGSEARVEIFGSQLTGLVLPSSDIDSVVLGGPRGSLGSLGAAMYRRQNKGEVREVTVIKSARVPLVKFVHVGSGVQVDVCFDQESGMKSGRAARAMMRQMQPVR 404          
BLAST of mRNA_H-elongata_contig11367.1091.1 vs. uniprot
Match: A0A6H5K966_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K966_9PHAE)

HSP 1 Score: 233 bits (593), Expect = 3.690e-71
Identity = 113/161 (70.19%), Postives = 133/161 (82.61%), Query Frame = 0
Query:    1 RSATPPWYRSESIARGFPLRTLHNEILDLCDLLMPTPEEKARTAIAITYVKRVVRETLGGNAKVHIFGSQLTGLVLPNSDVDTVVAGAPFNSIQNLGRAMFRRSRQEEVHDVVVIAKARVPIVKFVHAKTGVHVDVCFDQSSGLKSGAAARVLMRQMPQVR 161
            R+  PPWYR  S+ +GFPLRTLHNEILDLCDLLMPTPEEKA+TAIAITY+KRVV+E LG  AKV IFGSQLTGLVLP+SD+D+VV G P ++I +LG AM+RR  + EV +V VI KARVP+VKFVH  +GV VDVCFDQ SG++SG AAR +MRQM  VR
Sbjct:  165 RNIRPPWYRESSVEQGFPLRTLHNEILDLCDLLMPTPEEKAKTAIAITYIKRVVKENLGSEAKVEIFGSQLTGLVLPSSDIDSVVLGGPRSAIGSLGAAMYRRQNKGEVREVTVIKKARVPLVKFVHVGSGVQVDVCFDQESGMQSGRAARAMMRQMQPVR 325          
BLAST of mRNA_H-elongata_contig11367.1091.1 vs. uniprot
Match: A0A835YW64_9STRA (PAP-associated domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW64_9STRA)

HSP 1 Score: 132 bits (332), Expect = 9.250e-34
Identity = 67/156 (42.95%), Postives = 95/156 (60.90%), Query Frame = 0
Query:    5 PPWYRSESIARGFPLRTLHNEILDLCDLLMPTPEEKARTAIAITYVKRVVRETLGGNAKVHIFGSQLTGLVLPNSDVDTVVAGAPFNSIQNLGRAMFRRSRQEEVHDVVVIAKARVPIVKFVHAKTG----VHVDVCFDQSSGLKSGAAARVLMRQ 156
            PPW+R E       L TLHNEILD CDL+ PT  E      A+ +V +V  + LG    VH+FGS LT L++P+SD+D V+  AP N+I  L R + RRS   E+  + VI KA+VPI+KFV+   G    ++ D+CF+Q+SG+ +G     L+ +
Sbjct:   37 PPWFRHEHWCPENVLVTLHNEILDFCDLVKPTKAEHEDAERALNFVTQVAEQVLGNGVAVHVFGSHLTKLLVPSSDLDLVIMNAPSNAIHLLSRDLRRRSNTGEIESLEVIGKAKVPIIKFVYVPPGGTAKLNCDICFNQTSGINTGRQTVALLSE 192          
BLAST of mRNA_H-elongata_contig11367.1091.1 vs. uniprot
Match: A0A6J0PK18_ELAGV (inactive non-canonical poly(A) RNA polymerase protein Trf4-2 isoform X1 n=4 Tax=Arecaceae TaxID=4710 RepID=A0A6J0PK18_ELAGV)

HSP 1 Score: 110 bits (275), Expect = 2.700e-25
Identity = 64/165 (38.79%), Postives = 99/165 (60.00%), Query Frame = 0
Query:    1 RSATPPWYRSESIARGFPLRTLHNEILDLCDLLMPTPEEKARTAIAITYVKRVVRETLGGNAKVHIFGSQLTGLVLPNSDVDTVVAGA----PFNSIQNLGRAMFRRSRQEEVHDVVVIAKARVPIVKFVHAKTGVHVDVCFDQSSGLKSGAAARVLMRQMPQVR 161
            R+    W+R+ S  +  P+  LH EILD CD + PTPEE+A  A A+  V  +++  +  ++KV +FGS  TGL LP SD+D V+  +    P   +  L RA+ +RS  +++    VIAKARVPIVKFV  ++G++ D+ FD   G K+    +  +++MP +R
Sbjct:   82 RALEQAWFRAGSRFKS-PMLQLHKEILDFCDFVSPTPEERASRAAAVQCVFEIIKH-IWPHSKVEVFGSFRTGLYLPTSDIDVVILESKVKTPQMGLYALARALSQRSIVKKMQ---VIAKARVPIVKFVEKRSGIYFDISFDVDGGPKAADFIKDALKKMPPLR 241          
BLAST of mRNA_H-elongata_contig11367.1091.1 vs. uniprot
Match: A0A7J7I6L8_CAMSI (Uncharacterized protein n=2 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7I6L8_CAMSI)

HSP 1 Score: 110 bits (275), Expect = 3.080e-25
Identity = 67/159 (42.14%), Postives = 95/159 (59.75%), Query Frame = 0
Query:    7 WYRSESIARGFPLRTLHNEILDLCDLLMPTPEEKARTAIAITYVKRVVRETLGGNAKVHIFGSQLTGLVLPNSDVDTVVAGA----PFNSIQNLGRAMFRRSRQEEVHDVVVIAKARVPIVKFVHAKTGVHVDVCFDQSSGLKSGAAARVLMRQMPQVR 161
            W+R+    +  P+  LH EILD C+ L PTPEE+A    A+  V  VVR  +  N+KV +FGS  TGL LP SD+D V+ G+    P   +Q L RA+ +R   +++    VIAKARVPIVKFV  ++GV  D+ FD  +G K+    +  + +MP +R
Sbjct:  100 WFRANCRFKS-PMLQLHKEILDFCEFLSPTPEEQASRNAAVECVFDVVRY-IWPNSKVEVFGSFKTGLYLPTSDIDVVILGSDIKTPQIGLQALARALSQRGIAKKIQ---VIAKARVPIVKFVEKRSGVAFDISFDLQNGPKAAEFIKNAVSKMPPLR 253          
BLAST of mRNA_H-elongata_contig11367.1091.1 vs. uniprot
Match: A0A7S4DIS6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DIS6_HETAK)

HSP 1 Score: 108 bits (270), Expect = 5.510e-25
Identity = 66/157 (42.04%), Postives = 92/157 (58.60%), Query Frame = 0
Query:    6 PWYRSESIARGFPLRTLHNEILDLCDLLMPTPEEKARTAIAITYVKRVVRETLGGNAKVHIFGSQLTGLVLPNSDVDTVVAGAPFN-SIQNLGRAMFRRSRQEEVHDVVVIAKARVPIVKFVHAKTGVHVDVCFDQSSGLKSGAAARVLMRQMPQVR 161
            PW+R ES+    PL +LHNEILD CDL++P+PEE+      I   K V+ E L  +A+V +FGS+LT L LP SD+D            ++L R       +  +  + VI  AR+PIVK  H ++ VHVD+ F+Q SGL +GA  +  MR+ P VR
Sbjct:   76 PWFRPESLNHS-PLVSLHNEILDFCDLIVPSPEEQELRNRTIEDCKAVILE-LFPDAEVVVFGSELTQLALPTSDIDLAALNVQEEPKKRHLHRVGAAFKGKGIIDYLEVIDSARIPIVKLRHKESQVHVDISFNQPSGLATGACVQRFMRKFPPVR 230          
BLAST of mRNA_H-elongata_contig11367.1091.1 vs. uniprot
Match: A0A5B6YGP9_DAVIN (Putative non-canonical poly(A) RNA polymerase PAPD5 (Fragment) n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B6YGP9_DAVIN)

HSP 1 Score: 109 bits (273), Expect = 5.750e-25
Identity = 65/159 (40.88%), Postives = 93/159 (58.49%), Query Frame = 0
Query:    7 WYRSESIARGFPLRTLHNEILDLCDLLMPTPEEKARTAIAITYVKRVVRETLGGNAKVHIFGSQLTGLVLPNSDVDTVVAGA----PFNSIQNLGRAMFRRSRQEEVHDVVVIAKARVPIVKFVHAKTGVHVDVCFDQSSGLKSGAAARVLMRQMPQVR 161
            W+R+    +  P+  LH EILD CD L PTPEE+A    A+  V  V+R  +  N KV +FGS  TGL LP SD+D V+ G+    P   +Q L RA+ +R   +++    VIAKARVPI+KFV  ++GV  D+ FD  +G K+    +  + + P +R
Sbjct:  106 WFRANCRFKS-PMLQLHKEILDFCDFLSPTPEEQASRNTAVESVFNVIRY-IWPNCKVEVFGSFKTGLYLPTSDIDVVIMGSDIKTPQIGLQALSRALSQRGIAKKIQ---VIAKARVPIIKFVEKRSGVAFDISFDVENGPKAAEFIKDAISEWPPLR 259          
BLAST of mRNA_H-elongata_contig11367.1091.1 vs. uniprot
Match: W9RD67_9ROSA (PAP-associated domain-containing protein 5 n=2 Tax=Morus notabilis TaxID=981085 RepID=W9RD67_9ROSA)

HSP 1 Score: 109 bits (272), Expect = 7.070e-25
Identity = 66/159 (41.51%), Postives = 95/159 (59.75%), Query Frame = 0
Query:    7 WYRSESIARGFPLRTLHNEILDLCDLLMPTPEEKARTAIAITYVKRVVRETLGGNAKVHIFGSQLTGLVLPNSDVDTVVAGA----PFNSIQNLGRAMFRRSRQEEVHDVVVIAKARVPIVKFVHAKTGVHVDVCFDQSSGLKSGAAARVLMRQMPQVR 161
            W+R  S  +  P+  LH EI+D C+ L PTPEE+     AI  V  V++  +  N KV +FGS  TGL LP+SD+D V+ GA    P   +Q L RA+ +RS  +++    VIAKARVPI+KFV  K+GV  D+ FD  +G  +    + ++ +MP +R
Sbjct:   98 WFRGNSKFKS-PMLQLHKEIVDFCEFLSPTPEEQDARNAAIERVFDVIKY-IWPNCKVEVFGSFKTGLYLPSSDIDVVILGAGIPNPQQGLQALSRALSQRSLVKKMQ---VIAKARVPIIKFVEKKSGVAFDISFDVQNGPVAAEFIKDVVSKMPPLR 251          
BLAST of mRNA_H-elongata_contig11367.1091.1 vs. uniprot
Match: UPI001CFB5C06 (terminal nucleotidyltransferase 4B n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CFB5C06)

HSP 1 Score: 108 bits (271), Expect = 1.050e-24
Identity = 65/159 (40.88%), Postives = 92/159 (57.86%), Query Frame = 0
Query:    7 WYRSESIARGFPLRTLHNEILDLCDLLMPTPEEKARTAIAITYVKRVVRETLGGNAKVHIFGSQLTGLVLPNSDVDTVVAGA----PFNSIQNLGRAMFRRSRQEEVHDVVVIAKARVPIVKFVHAKTGVHVDVCFDQSSGLKSGAAARVLMRQMPQVR 161
            W++  S  +  P+  LH EI+D CD L PTPEE+A    A+  V  V++  +  N K  +FGS  TGL LP SD+D V+ G+    P   +Q L RA+   S+Q     + VIAKARVPI+KFV  K+GV  D+ FD  +G K+    +  + + PQ+R
Sbjct:  102 WFKGNSRFKS-PMLQLHKEIVDFCDFLSPTPEEQALRNAAVESVFDVIKY-IWPNCKPEVFGSFRTGLYLPTSDIDVVILGSGIKNPPTGLQALSRAL---SQQGIAKKIQVIAKARVPIIKFVEKKSGVSFDISFDAQNGPKAAEFIKDALSKWPQLR 255          
BLAST of mRNA_H-elongata_contig11367.1091.1 vs. uniprot
Match: A0A6I9TES8_SESIN (non-canonical poly(A) RNA polymerase PAPD5 n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9TES8_SESIN)

HSP 1 Score: 108 bits (270), Expect = 1.270e-24
Identity = 65/159 (40.88%), Postives = 95/159 (59.75%), Query Frame = 0
Query:    7 WYRSESIARGFPLRTLHNEILDLCDLLMPTPEEKARTAIAITYVKRVVRETLGGNAKVHIFGSQLTGLVLPNSDVDTVVAGAPFNS----IQNLGRAMFRRSRQEEVHDVVVIAKARVPIVKFVHAKTGVHVDVCFDQSSGLKSGAAARVLMRQMPQVR 161
            W+R+    +  P+  LH EILD CD L PTPEE+     AI  V  V++  +  NA+V +FGS  TGL LP+SD+D V+ G+   S    +Q L RA+ +R   +++    VIAKARVPI+KFV  K+GV  D+ FD ++G K+    +  + + P +R
Sbjct:   95 WFRANCRFKS-PMLQLHKEILDFCDFLSPTPEEQESRNAAIESVFNVIKY-IWPNAEVEVFGSFKTGLYLPSSDIDVVILGSNVRSPQIGLQALSRALSQRGIAKKIQ---VIAKARVPIIKFVEKKSGVAFDISFDVNNGPKAAEFIKDAVSKWPPLR 248          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11367.1091.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPV2_ECTSI2.680e-7270.19Nucleotidyltransferase family protein n=1 Tax=Ecto... [more]
A0A6H5K966_9PHAE3.690e-7170.19Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835YW64_9STRA9.250e-3442.95PAP-associated domain-containing protein n=1 Tax=T... [more]
A0A6J0PK18_ELAGV2.700e-2538.79inactive non-canonical poly(A) RNA polymerase prot... [more]
A0A7J7I6L8_CAMSI3.080e-2542.14Uncharacterized protein n=2 Tax=Camellia sinensis ... [more]
A0A7S4DIS6_HETAK5.510e-2542.04Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A5B6YGP9_DAVIN5.750e-2540.88Putative non-canonical poly(A) RNA polymerase PAPD... [more]
W9RD67_9ROSA7.070e-2541.51PAP-associated domain-containing protein 5 n=2 Tax... [more]
UPI001CFB5C061.050e-2440.88terminal nucleotidyltransferase 4B n=1 Tax=Mangife... [more]
A0A6I9TES8_SESIN1.270e-2440.88non-canonical poly(A) RNA polymerase PAPD5 n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002934Polymerase, nucleotidyl transferase domainPFAMPF01909NTP_transf_2coord: 52..138
e-value: 4.3E-10
score: 39.8
NoneNo IPR availableGENE3D3.30.460.10coord: 35..143
e-value: 1.6E-24
score: 88.0
NoneNo IPR availablePANTHERPTHR23092POLY(A) RNA POLYMERASEcoord: 3..161
NoneNo IPR availablePANTHERPTHR23092:SF15INACTIVE NON-CANONICAL POLY(A) RNA POLYMERASE PROTEIN TRF4-2-RELATEDcoord: 3..161
NoneNo IPR availableSUPERFAMILY81301Nucleotidyltransferasecoord: 21..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11367contigH-elongata_contig11367:213..2693 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11367.1091.1mRNA_H-elongata_contig11367.1091.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11367 213..2693 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11367.1091.1 ID=prot_H-elongata_contig11367.1091.1|Name=mRNA_H-elongata_contig11367.1091.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=161bp
RSATPPWYRSESIARGFPLRTLHNEILDLCDLLMPTPEEKARTAIAITYV
KRVVRETLGGNAKVHIFGSQLTGLVLPNSDVDTVVAGAPFNSIQNLGRAM
FRRSRQEEVHDVVVIAKARVPIVKFVHAKTGVHVDVCFDQSSGLKSGAAA
RVLMRQMPQVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002934Polymerase_NTP_transf_dom