prot_H-elongata_contig11350.1083.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11350.1083.1
Unique Nameprot_H-elongata_contig11350.1083.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length173
Homology
BLAST of mRNA_H-elongata_contig11350.1083.1 vs. uniprot
Match: D7FM51_ECTSI (FAM194 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM51_ECTSI)

HSP 1 Score: 223 bits (569), Expect = 6.440e-66
Identity = 103/163 (63.19%), Postives = 125/163 (76.69%), Query Frame = 0
Query:    6 GNNEENIELYSSGLRASAFKADGSGFIYYPSGNVAIYKGIIDGRCRYYIYGNDARSTPLGAVDEHAVGFFLGPCRVRLVLNKIGGLLTDESGYIVKEWRYDPGARIPPHTEVLKIRLNASVTFEFRDKSDMMIKFQQDGVCRELDAGVRPKQERSYLDHRWQV 168
            G   +N E Y SG  AS FK DGSGFIYYPSG VA+ KG++DGR RYY+YG+D RSTPLGAV+EH VGFFLGP  VRL L+K+GGL+TD  GYI +EWRYDPGA +PP T VL ++LN S+ FEF D+ +M IKF  +G+  ELDAGV PK+E +YLD+R Q 
Sbjct:    8 GTKADNAEYYPSGRLASVFKEDGSGFIYYPSGLVAVCKGVVDGRGRYYVYGDDRRSTPLGAVNEHGVGFFLGPSGVRLALSKVGGLITDRHGYIAREWRYDPGAHMPPPTSVLDVKLNKSMNFEFLDRREMRIKFLHEGISHELDAGVHPKREGTYLDNRQQA 170          
BLAST of mRNA_H-elongata_contig11350.1083.1 vs. uniprot
Match: UPI001560AE95 (uncharacterized protein LOC117415242 n=1 Tax=Acipenser ruthenus TaxID=7906 RepID=UPI001560AE95)

HSP 1 Score: 58.5 bits (140), Expect = 7.400e-7
Identity = 42/130 (32.31%), Postives = 65/130 (50.00%), Query Frame = 0
Query:   27 DGSGFIYYPSGNVAI---YKGIIDGRCRYYIYGND------ARSTPLGAVDEHAVGFFLGPCRVRLVLNKIGGLLTDESGYIVKEWRYDPGARIPPHTEVLKIRLNASVTFEFRDKSDMMIKF--QQDGV 145
            DGS FIYYPSG +A+   Y G+  G     ++ +       A  TP G    HA     G   V L+L++ GG+LTDE G + KEW +  G ++    E + I++N  +T      + + + +  QQ+ V
Sbjct:  392 DGSSFIYYPSGRIAVCQSYSGLPCGGFYTNVFSDSSDPYTLATFTPFG----HASVCHPGSHTVALLLDQDGGILTDEEGTVTKEWNWAQGVKL---NETVLIQVNDFITVRVVSPTSINLSYRWQQESV 514          
BLAST of mRNA_H-elongata_contig11350.1083.1 vs. uniprot
Match: UPI001B7E4516 (uncharacterized protein LOC121320255 isoform X1 n=2 Tax=Polyodon spathula TaxID=7913 RepID=UPI001B7E4516)

HSP 1 Score: 57.8 bits (138), Expect = 1.270e-6
Identity = 43/130 (33.08%), Postives = 65/130 (50.00%), Query Frame = 0
Query:   27 DGSGFIYYPSGNVAI---YKGIIDGRCRYYIYGND------ARSTPLGAVDEHAVGFFLGPCRVRLVLNKIGGLLTDESGYIVKEWRYDPGARIPPHTEVLKIRLN--ASVTFEFRDKSDMMIKFQQDGV 145
            DGS FIYYPSG +A+   Y G+  G     ++ +       A  TP G    HA     G   V L+L++ GG+LTDE G + KEW +  G ++    E + I++N   SV     +   +  ++QQ+ V
Sbjct:  393 DGSSFIYYPSGRIAVCQSYSGLPCGGFYTNVFSDSPDLYTLATFTPFG----HASVCHPGSNTVALLLDQDGGILTDEEGTVTKEWNWAQGVKL---NETVLIQVNDFISVRVVSPNSISLSYRWQQESV 515          
BLAST of mRNA_H-elongata_contig11350.1083.1 vs. uniprot
Match: UPI000B3DA08E (glutamate-rich protein 6B isoform X1 n=2 Tax=Numida meleagris TaxID=8996 RepID=UPI000B3DA08E)

HSP 1 Score: 55.5 bits (132), Expect = 7.840e-6
Identity = 41/143 (28.67%), Postives = 64/143 (44.76%), Query Frame = 0
Query:   27 DGSGFIYYPSGNVAIYKGIIDGRCRYYIYGNDARSTPLGAVDE---HAVGFFLGPCRVRLVLNKIGGLLTDESGYIVKEWRY-DPGARIP-PHTEVLKIRLNASVTFEFRDKSDMMIKFQQDGVCRELDAGVRPKQERSYLDH 164
            DGSG +YYPSGN+AI     +     Y+   D R   + A      H V F    C  R +L+   G+  D++G   K W + D    I  P  + + ++LNA +T +   +  + + F     C   ++G RPK +     H
Sbjct:  433 DGSGQVYYPSGNIAILIAFTEEAQFTYVILEDDRHPRIRAAFRSRGHGVTFHSNGCP-RTILSPCTGICFDQAGVRQKHWNWHDLSHHIHRPPFQPITMKLNAHLTLKIAAQDKIHLWFASRNNCIRFNSGARPKLKDPKTSH 574          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11350.1083.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FM51_ECTSI6.440e-6663.19FAM194 domain-containing protein n=1 Tax=Ectocarpu... [more]
UPI001560AE957.400e-732.31uncharacterized protein LOC117415242 n=1 Tax=Acipe... [more]
UPI001B7E45161.270e-633.08uncharacterized protein LOC121320255 isoform X1 n=... [more]
UPI000B3DA08E7.840e-628.67glutamate-rich protein 6B isoform X1 n=2 Tax=Numid... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029281FAM194, C-terminalPFAMPF14977FAM194coord: 8..158
e-value: 6.5E-29
score: 100.7
NoneNo IPR availablePANTHERPTHR23093FAMILY NOT NAMEDcoord: 24..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11350contigH-elongata_contig11350:651..1326 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11350.1083.1mRNA_H-elongata_contig11350.1083.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11350 651..1326 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11350.1083.1 ID=prot_H-elongata_contig11350.1083.1|Name=mRNA_H-elongata_contig11350.1083.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=173bp
MAPPHGNNEENIELYSSGLRASAFKADGSGFIYYPSGNVAIYKGIIDGRC
RYYIYGNDARSTPLGAVDEHAVGFFLGPCRVRLVLNKIGGLLTDESGYIV
KEWRYDPGARIPPHTEVLKIRLNASVTFEFRDKSDMMIKFQQDGVCRELD
AGVRPKQERSYLDHRWQVLNLN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029281FAM194_C