prot_H-elongata_contig113353.1079.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig113353.1079.1
Unique Nameprot_H-elongata_contig113353.1079.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length83
Homology
BLAST of mRNA_H-elongata_contig113353.1079.1 vs. uniprot
Match: D8LQH0_ECTSI (Chloride channel protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQH0_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 1.860e-33
Identity = 62/83 (74.70%), Postives = 69/83 (83.13%), Query Frame = 0
Query:    1 ELTWEVLEGSYPQYPSISDLKVPEEKLDYLVDIAAYVQIGPPVINEHASAHRAYIMFRTLGLRHLVVVNHYNEVVGIITRENL 83
            EL+W VLE SYP YP + D+K+  E    L+DIA YVQIGP  INEHASAHRAYIMFRTLGLRHLVVVNHYNEV+G+ITRENL
Sbjct:  382 ELSWSVLERSYPHYPMLQDIKIGGEHWHCLMDIAPYVQIGPHCINEHASAHRAYIMFRTLGLRHLVVVNHYNEVMGMITRENL 464          
BLAST of mRNA_H-elongata_contig113353.1079.1 vs. uniprot
Match: A0A836CM41_9STRA (Chloride channel protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM41_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.990e-28
Identity = 56/82 (68.29%), Postives = 65/82 (79.27%), Query Frame = 0
Query:    2 LTWEVLEGSYPQYPSISDLKVPEEKLDYLVDIAAYVQIGPPVINEHASAHRAYIMFRTLGLRHLVVVNHYNEVVGIITRENL 83
            L W  LEG YP+YP +  L + EE    L+D+AAYVQ+GP  +NEHASAHRAY MFRTLGLRHL VVNH+NEVVGII+RENL
Sbjct:  538 LAWGDLEGRYPKYPRMEHLDLSEEDGRCLIDLAAYVQVGPHSMNEHASAHRAYEMFRTLGLRHLTVVNHFNEVVGIISRENL 619          
BLAST of mRNA_H-elongata_contig113353.1079.1 vs. uniprot
Match: A0A7S2B9U1_9STRA (Chloride channel protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B9U1_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 2.890e-20
Identity = 43/82 (52.44%), Postives = 59/82 (71.95%), Query Frame = 0
Query:    2 LTWEVLEGSYPQYPSISDLKVPEEKLDYLVDIAAYVQIGPPVINEHASAHRAYIMFRTLGLRHLVVVNHYNEVVGIITRENL 83
            +T+E+LE  YP YPSI D+ +  E+LDY +D+  Y+   P  I   AS HRAY+MFRT+GLRHL VV++   VVG++TR+NL
Sbjct:  301 ITYEILESVYPNYPSIHDINISGEELDYWLDLRPYLNSTPYNIQSRASVHRAYVMFRTMGLRHLPVVDNKMCVVGVLTRKNL 382          
BLAST of mRNA_H-elongata_contig113353.1079.1 vs. uniprot
Match: A0A161MJ05_TRIIF (H(+) cl(-) exchange transporter 7 (Fragment) n=1 Tax=Triatoma infestans TaxID=30076 RepID=A0A161MJ05_TRIIF)

HSP 1 Score: 86.7 bits (213), Expect = 9.880e-20
Identity = 37/83 (44.58%), Postives = 57/83 (68.67%), Query Frame = 0
Query:    1 ELTWEVLEGSYPQYPSISDLKVPEEKLDYLVDIAAYVQIGPPVINEHASAHRAYIMFRTLGLRHLVVVNHYNEVVGIITRENL 83
            E+T +     YP+YP I D+ +PEE+++Y +D+  Y+   P  + + AS  R + +FR LGLRHL+VVN  NEVVG++TR++L
Sbjct:   52 EITVKTFRDKYPRYPEIKDIYIPEEEMEYTIDLTPYMNPSPYTVQQVASLPRIFRLFRALGLRHLIVVNEINEVVGMVTRKDL 134          
BLAST of mRNA_H-elongata_contig113353.1079.1 vs. uniprot
Match: A0A7S2XUS9_9STRA (Chloride channel protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUS9_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 3.860e-18
Identity = 39/82 (47.56%), Postives = 56/82 (68.29%), Query Frame = 0
Query:    2 LTWEVLEGSYPQYPSISDLKVPEEKLDYLVDIAAYVQIGPPVINEHASAHRAYIMFRTLGLRHLVVVNHYNEVVGIITRENL 83
            L W VLEG YP+YP+  DL V   + +  +D+  Y    P +I E  S  R Y +FRTLGLRH++V+N++N+VVG+ITR++L
Sbjct:  512 LQWGVLEGMYPRYPNPEDLIVTSAERECWIDLRPYTNAAPYIIQESTSVERTYRLFRTLGLRHIIVINNHNQVVGMITRKDL 593          
BLAST of mRNA_H-elongata_contig113353.1079.1 vs. uniprot
Match: A0A7S0UJS8_9STRA (Chloride channel protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UJS8_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 7.260e-18
Identity = 41/80 (51.25%), Postives = 54/80 (67.50%), Query Frame = 0
Query:    4 WEVLEGSYPQYPSISDLKVPEEKLDYLVDIAAYVQIGPPVINEHASAHRAYIMFRTLGLRHLVVVNHYNEVVGIITRENL 83
            W+ +E +YP+YPSI D ++ E   +  +D+  Y    P  INE AS  R Y +FRTLGLR L VVNH N+VVGIITR++L
Sbjct:  636 WDTIERAYPRYPSIDDFEIGEADRNCWLDLRPYANTAPYTINETASIQRTYRLFRTLGLRFLCVVNHNNQVVGIITRKDL 715          
BLAST of mRNA_H-elongata_contig113353.1079.1 vs. uniprot
Match: A0A1Z5JAK4_FISSO (Chloride channel protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JAK4_FISSO)

HSP 1 Score: 85.9 bits (211), Expect = 9.970e-18
Identity = 41/80 (51.25%), Postives = 55/80 (68.75%), Query Frame = 0
Query:    4 WEVLEGSYPQYPSISDLKVPEEKLDYLVDIAAYVQIGPPVINEHASAHRAYIMFRTLGLRHLVVVNHYNEVVGIITRENL 83
            W+ +E +YP+YP ISD+ + E+  +  +D+  Y    P  INE AS  R Y +FRTLGLR L VVNH N+VVGIITR++L
Sbjct:  759 WDTIEKAYPRYPRISDVHLREQDRNCWLDLRPYANTAPYTINETASIQRTYRLFRTLGLRFLCVVNHNNQVVGIITRKDL 838          
BLAST of mRNA_H-elongata_contig113353.1079.1 vs. uniprot
Match: A0A7R9ZRT7_9STRA (Chloride channel protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZRT7_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.820e-17
Identity = 39/80 (48.75%), Postives = 54/80 (67.50%), Query Frame = 0
Query:    4 WEVLEGSYPQYPSISDLKVPEEKLDYLVDIAAYVQIGPPVINEHASAHRAYIMFRTLGLRHLVVVNHYNEVVGIITRENL 83
            W+ +E +YP+YP+I D+ + E   +  +D+  Y    P  +NE AS  R Y +FRTLGLR L VVNH N+VVGIITR++L
Sbjct:  215 WDTIERAYPRYPTIDDVDMRESDQNCWLDLRPYANTAPYTVNETASIQRTYRLFRTLGLRFLCVVNHNNQVVGIITRKDL 294          
BLAST of mRNA_H-elongata_contig113353.1079.1 vs. uniprot
Match: A0A1E7FXI3_9STRA (Chloride channel protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FXI3_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 1.850e-17
Identity = 40/80 (50.00%), Postives = 54/80 (67.50%), Query Frame = 0
Query:    4 WEVLEGSYPQYPSISDLKVPEEKLDYLVDIAAYVQIGPPVINEHASAHRAYIMFRTLGLRHLVVVNHYNEVVGIITRENL 83
            W+ +E +YP+YP+I D+ + E   +  +D+  Y    P  INE AS  R Y +FRTLGLR L VVNH N+VVGIITR++L
Sbjct:  692 WDTIERAYPRYPNIDDIDIGEADRNCWLDLRPYANTAPYTINETASIQRTYRLFRTLGLRFLCVVNHNNQVVGIITRKDL 771          
BLAST of mRNA_H-elongata_contig113353.1079.1 vs. uniprot
Match: A0A3P3YDK2_PLABS (Chloride channel protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YDK2_PLABS)

HSP 1 Score: 85.1 bits (209), Expect = 1.850e-17
Identity = 39/82 (47.56%), Postives = 57/82 (69.51%), Query Frame = 0
Query:    2 LTWEVLEGSYPQYPSISDLKVPEEKLDYLVDIAAYVQIGPPVINEHASAHRAYIMFRTLGLRHLVVVNHYNEVVGIITRENL 83
            LT+  LEG YP++P +S + + +  LD  VD+  Y+   P VI EH+ A  A+ +FRT+GLRHL VVN+ N++ G+ITR+NL
Sbjct:  662 LTYMDLEGCYPRFPDVSSVSLDDSDLDLWVDLTPYMNPSPYVIQEHSPATHAFDLFRTMGLRHLCVVNNKNQITGMITRKNL 743          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig113353.1079.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQH0_ECTSI1.860e-3374.70Chloride channel protein n=1 Tax=Ectocarpus silicu... [more]
A0A836CM41_9STRA1.990e-2868.29Chloride channel protein n=1 Tax=Tribonema minus T... [more]
A0A7S2B9U1_9STRA2.890e-2052.44Chloride channel protein n=1 Tax=Dictyocha speculu... [more]
A0A161MJ05_TRIIF9.880e-2044.58H(+) cl(-) exchange transporter 7 (Fragment) n=1 T... [more]
A0A7S2XUS9_9STRA3.860e-1847.56Chloride channel protein n=1 Tax=Fibrocapsa japoni... [more]
A0A7S0UJS8_9STRA7.260e-1851.25Chloride channel protein n=1 Tax=Pseudo-nitzschia ... [more]
A0A1Z5JAK4_FISSO9.970e-1851.25Chloride channel protein n=2 Tax=Fistulifera solar... [more]
A0A7R9ZRT7_9STRA1.820e-1748.75Chloride channel protein n=1 Tax=Craspedostauros a... [more]
A0A1E7FXI3_9STRA1.850e-1750.00Chloride channel protein n=1 Tax=Fragilariopsis cy... [more]
A0A3P3YDK2_PLABS1.850e-1747.56Chloride channel protein n=2 Tax=Plasmodiophora br... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.580.10coord: 5..83
e-value: 3.4E-8
score: 35.7
NoneNo IPR availablePANTHERPTHR11689CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBERcoord: 14..83
NoneNo IPR availablePANTHERPTHR11689:SF136CHLORIDE CHANNEL PROTEIN Bcoord: 14..83
NoneNo IPR availableSUPERFAMILY54631CBS-domain paircoord: 11..83
IPR000644CBS domainPROSITEPS51371CBScoord: 36..83
score: 9.448

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig113353contigH-elongata_contig113353:181..749 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig113353.1079.1mRNA_H-elongata_contig113353.1079.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig113353 181..749 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig113353.1079.1 ID=prot_H-elongata_contig113353.1079.1|Name=mRNA_H-elongata_contig113353.1079.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp
ELTWEVLEGSYPQYPSISDLKVPEEKLDYLVDIAAYVQIGPPVINEHASA
HRAYIMFRTLGLRHLVVVNHYNEVVGIITRENL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000644CBS_dom