prot_H-elongata_contig11310.1064.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11310.1064.1
Unique Nameprot_H-elongata_contig11310.1064.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length79
Homology
BLAST of mRNA_H-elongata_contig11310.1064.1 vs. uniprot
Match: D7FR96_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR96_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 7.330e-26
Identity = 47/78 (60.26%), Postives = 57/78 (73.08%), Query Frame = 0
Query:    1 MDLYRLCGTHDLDVIDIRKVLETGICLIEWPDRLGADKPRNRLDVQVDAVNEGERIVTLTGHGAWWAATVDDFRDDRQ 78
            MDLYRL G  DL V+ I  V ET +CL+EWPDRLGA +P NRLDV + AVNE ERI+   GHGAWW   V+DF++ R+
Sbjct:  160 MDLYRLQGGTDLRVLGIPGVFETCVCLVEWPDRLGATQPVNRLDVHLTAVNEEERILKFIGHGAWWTGVVEDFQEARR 237          
BLAST of mRNA_H-elongata_contig11310.1064.1 vs. uniprot
Match: W7T2V7_9STRA (Uncharacterized domain UPF0079, ATPase bacteria n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2V7_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 2.390e-14
Identity = 37/73 (50.68%), Postives = 46/73 (63.01%), Query Frame = 0
Query:    1 MDLYRLCG-THDLDVIDIRKVLETGICLIEWPDRLGADKPRNRLDVQVDAVNEGERIVTLTGHGAWWAATVDD 72
            MDLYRL   THDL ++ I  VL  G+CLIEWPDRLG   P  R+++ + A NEG R +T+   G  WA  V D
Sbjct:  254 MDLYRLSTETHDLKILGIPAVLVEGLCLIEWPDRLGIHTPSTRVEIWLLAQNEGTRTITVKAVGGGWAQEVVD 326          
BLAST of mRNA_H-elongata_contig11310.1064.1 vs. uniprot
Match: A0A522WLG5_9PROT (tRNA threonylcarbamoyladenosine biosynthesis protein TsaE n=1 Tax=Magnetospirillum sp. TaxID=31872 RepID=A0A522WLG5_9PROT)

HSP 1 Score: 72.0 bits (175), Expect = 3.730e-14
Identity = 35/65 (53.85%), Postives = 43/65 (66.15%), Query Frame = 0
Query:    2 DLYRLCGTHDLDVIDIRKVLETGICLIEWPDRLGADKPRNRLDVQVDAVN-EGERIVTLTGHGAW 65
            DLYRL    D   +DI +    GICLIEWPDRLG   P+ RLDV+++  + EGER V LT HG+W
Sbjct:   78 DLYRLEKPDDALELDIEEAFADGICLIEWPDRLGPHLPKRRLDVRLETGDVEGERRVILTAHGSW 142          
BLAST of mRNA_H-elongata_contig11310.1064.1 vs. uniprot
Match: UPI001EDDFEA7 (tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE n=1 Tax=Shewanella sp. ER-Te-42B-Light TaxID=2872342 RepID=UPI001EDDFEA7)

HSP 1 Score: 71.6 bits (174), Expect = 5.390e-14
Identity = 31/64 (48.44%), Postives = 44/64 (68.75%), Query Frame = 0
Query:    2 DLYRLCGTHDLDVIDIRKVLETGICLIEWPDRLGADKPRNRLDVQVDAVNEGERIVTLTGHGAW 65
            DLYRL  T +LD + + + L+ G  LIEWPDRLGA +P +RLD++++   +G R V L  HG+W
Sbjct:   81 DLYRLEDTGELDELGLDEALDQGAALIEWPDRLGAWRPADRLDIRLEETGDGGRGVRLAAHGSW 144          
BLAST of mRNA_H-elongata_contig11310.1064.1 vs. uniprot
Match: A0A178MZ72_9PROT (tRNA threonylcarbamoyladenosine biosynthesis protein TsaE n=1 Tax=Magnetospirillum marisnigri TaxID=1285242 RepID=A0A178MZ72_9PROT)

HSP 1 Score: 71.6 bits (174), Expect = 6.010e-14
Identity = 35/65 (53.85%), Postives = 41/65 (63.08%), Query Frame = 0
Query:    2 DLYRLCGTHDLDVIDIRKVLETGICLIEWPDRLGADKPRNRLDVQVDA-VNEGERIVTLTGHGAW 65
            DLYRL    D   +DI +    GICLIEWPDRLG   PR RLD+ ++A   E  R  TLTGHG+W
Sbjct:   84 DLYRLEAPDDALELDIEEAFAEGICLIEWPDRLGPHLPRRRLDLALEAGETETSRRATLTGHGSW 148          
BLAST of mRNA_H-elongata_contig11310.1064.1 vs. uniprot
Match: A0A0H5RBB8_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RBB8_9EUKA)

HSP 1 Score: 69.7 bits (169), Expect = 4.930e-13
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 0
Query:    1 MDLYRLCGTHDLDVIDIRKVLETGICLIEWPDRLGADKPRNRLDVQV----DAVNEGERIVTLTGHGAWWAATVDDFRD 75
            MDLYRL     +  +D+ +   TGICL+EWP+RLG +KP +RLD+ +    +  N   R + L G G  W+  + +  D
Sbjct:   86 MDLYRLASRDSIGFLDLERSFRTGICLVEWPERLGDNKPAHRLDINISDSFETKNAEVRFLQLQGFGERWSEVLHEMSD 164          
BLAST of mRNA_H-elongata_contig11310.1064.1 vs. uniprot
Match: A0A1H3IJJ6_9RHOB (tRNA threonylcarbamoyladenosine biosynthesis protein TsaE n=1 Tax=Jannaschia faecimaris TaxID=1244108 RepID=A0A1H3IJJ6_9RHOB)

HSP 1 Score: 67.4 bits (163), Expect = 3.000e-12
Identity = 31/73 (42.47%), Postives = 45/73 (61.64%), Query Frame = 0
Query:    2 DLYRLCGTHDLDVIDIRKVLETGICLIEWPDRLGADKPRNRLDVQVDAVNEGERIVTLTGHGAWWAATVDDFR 74
            DLYRL G   +  + + +  ET +CLIEWPDRLG D+P+  +D+ +DA  +  R +T+TG      AT+D  R
Sbjct:   87 DLYRLSGPDAVTELGLDEAFETALCLIEWPDRLGLDRPQAAIDIMLDATPDDRRRLTITGP----RATMDRLR 155          
BLAST of mRNA_H-elongata_contig11310.1064.1 vs. uniprot
Match: A0A7Y4TCF0_9PROT (tRNA threonylcarbamoyladenosine biosynthesis protein TsaE n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7Y4TCF0_9PROT)

HSP 1 Score: 65.5 bits (158), Expect = 1.800e-11
Identity = 28/67 (41.79%), Postives = 44/67 (65.67%), Query Frame = 0
Query:    1 MDLYRLCGTHDLDVIDIRKVLETGICLIEWPDRLGADKPRNRLDVQVDAVNEGERIVTLTGHGAWWA 67
            +DLYR+    +L  + + +VLE G+ +IEWPDR+G   P +RLD+  +AV+   R++ L G G+W A
Sbjct:   90 VDLYRVKALSELRELGLDEVLERGVLVIEWPDRMGLQLPDDRLDIMFEAVDGETRLMKLVGRGSWVA 156          
BLAST of mRNA_H-elongata_contig11310.1064.1 vs. uniprot
Match: A0A5M6ZIS6_9PROT (tRNA threonylcarbamoyladenosine biosynthesis protein TsaE n=1 Tax=Alkalicaulis satelles TaxID=2609175 RepID=A0A5M6ZIS6_9PROT)

HSP 1 Score: 64.7 bits (156), Expect = 2.670e-11
Identity = 29/64 (45.31%), Postives = 41/64 (64.06%), Query Frame = 0
Query:    2 DLYRLCGTHDLDVIDIRKVLETGICLIEWPDRLGADKPRNRLDVQVDAVNEGERIVTLTGHGAW 65
            DLYRL     LD + + + L+ G  LIEWPDRLGA +P +RL+++++    G R V L  HG+W
Sbjct:   81 DLYRLEDPSALDELGLDEALDHGAALIEWPDRLGAWRPADRLEIRLEETPSGGRDVHLAAHGSW 144          
BLAST of mRNA_H-elongata_contig11310.1064.1 vs. uniprot
Match: A0A0G4IYT3_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IYT3_PLABS)

HSP 1 Score: 65.1 bits (157), Expect = 2.680e-11
Identity = 31/75 (41.33%), Postives = 45/75 (60.00%), Query Frame = 0
Query:    1 MDLYRLCGTHDLDVIDIRKVLETGICLIEWPDRL--GADKPRNRLDVQVDAVNEGERIVTLTGHGAWWAATVDDF 73
            +DLYRL G  DLD++ + ++ +T ICLIEWPDRL  G + P++RL V++       R  +L   G  WA  + D 
Sbjct:   83 IDLYRLTGKDDLDMLCLERLYQTSICLIEWPDRLHVGNNLPKSRLQVEIADDGADSRTFSLEAVGDRWAPVLADI 157          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11310.1064.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR96_ECTSI7.330e-2660.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7T2V7_9STRA2.390e-1450.68Uncharacterized domain UPF0079, ATPase bacteria n=... [more]
A0A522WLG5_9PROT3.730e-1453.85tRNA threonylcarbamoyladenosine biosynthesis prote... [more]
UPI001EDDFEA75.390e-1448.44tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera... [more]
A0A178MZ72_9PROT6.010e-1453.85tRNA threonylcarbamoyladenosine biosynthesis prote... [more]
A0A0H5RBB8_9EUKA4.930e-1337.97Uncharacterized protein n=1 Tax=Spongospora subter... [more]
A0A1H3IJJ6_9RHOB3.000e-1242.47tRNA threonylcarbamoyladenosine biosynthesis prote... [more]
A0A7Y4TCF0_9PROT1.800e-1141.79tRNA threonylcarbamoyladenosine biosynthesis prote... [more]
A0A5M6ZIS6_9PROT2.670e-1145.31tRNA threonylcarbamoyladenosine biosynthesis prote... [more]
A0A0G4IYT3_PLABS2.680e-1141.33Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..73
e-value: 1.9E-9
score: 39.1
NoneNo IPR availablePANTHERPTHR33540:SF2TRNA THREONYLCARBAMOYLADENOSINE BIOSYNTHESIS PROTEIN TSAEcoord: 1..74
NoneNo IPR availablePANTHERPTHR33540FAMILY NOT NAMEDcoord: 1..74
IPR003442tRNA threonylcarbamoyl adenosine modification protein TsaEPFAMPF02367TsaEcoord: 1..51
e-value: 6.7E-8
score: 32.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11310contigH-elongata_contig11310:7175..8655 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11310.1064.1mRNA_H-elongata_contig11310.1064.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11310 5690..8666 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11310.1064.1 ID=prot_H-elongata_contig11310.1064.1|Name=mRNA_H-elongata_contig11310.1064.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=79bp
MDLYRLCGTHDLDVIDIRKVLETGICLIEWPDRLGADKPRNRLDVQVDAV
NEGERIVTLTGHGAWWAATVDDFRDDRQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003442T6A_TsaE