prot_H-elongata_contig112811.1048.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig112811.1048.1
Unique Nameprot_H-elongata_contig112811.1048.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length150
Homology
BLAST of mRNA_H-elongata_contig112811.1048.1 vs. uniprot
Match: D8LL95_ECTSI (Coatomer subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL95_ECTSI)

HSP 1 Score: 259 bits (661), Expect = 2.110e-77
Identity = 135/149 (90.60%), Postives = 141/149 (94.63%), Query Frame = 0
Query:    1 MELLAYFTCCNLQPAHLLLALRMAMAAAFKGKNFITAASFAQRLLELPDLSSERHADLRNKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALRPIYRGTPLVKCPYCGSAYQPAAKGSVCVTCGLSQIGVKTLGLVTSSSASAGGKR 149
            MELLAYFTCCNLQPAHLLLALRMAMA+AFKGKNFITAASFAQRLLELPDLSSERHADLR KAQKVLQKSQQMARNEHTLDYDERNPFEVDCQ+L+PIYRGTP  KCPYCGSAY  +AKG VCVTCGLSQIGV+TLGLVT+SSA  GGKR
Sbjct: 1112 MELLAYFTCCNLQPAHLLLALRMAMASAFKGKNFITAASFAQRLLELPDLSSERHADLRIKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQSLKPIYRGTPSCKCPYCGSAYPLSAKGMVCVTCGLSQIGVETLGLVTTSSA--GGKR 1258          
BLAST of mRNA_H-elongata_contig112811.1048.1 vs. uniprot
Match: A0A6H5KXQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXQ0_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 5.390e-77
Identity = 135/152 (88.82%), Postives = 142/152 (93.42%), Query Frame = 0
Query:    1 MELLAYFTCCNLQPAHLLLALRMAMAAAFKGKNFITAASFAQRLLELPDLSSERHADLRNK---AQKVLQKSQQMARNEHTLDYDERNPFEVDCQALRPIYRGTPLVKCPYCGSAYQPAAKGSVCVTCGLSQIGVKTLGLVTSSSASAGGKR 149
            MELLAYFTCCNLQPAHLLLALRMAMA+AFKGKNFITAASFAQRLLELPDLSSERHADLR K   AQKVLQKSQQMARNEHTLDYDERNPFEVDCQ+L+PIYRGTP  KCPYCGSAY  +AKG+VCVTCGLSQIGV+TLGLVT+SSA  GGKR
Sbjct:  743 MELLAYFTCCNLQPAHLLLALRMAMASAFKGKNFITAASFAQRLLELPDLSSERHADLRLKVGLAQKVLQKSQQMARNEHTLDYDERNPFEVDCQSLKPIYRGTPSCKCPYCGSAYPLSAKGTVCVTCGLSQIGVETLGLVTTSSA--GGKR 892          
BLAST of mRNA_H-elongata_contig112811.1048.1 vs. uniprot
Match: A0A835Z8J6_9STRA (Coatomer subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8J6_9STRA)

HSP 1 Score: 219 bits (558), Expect = 2.270e-63
Identity = 109/145 (75.17%), Postives = 129/145 (88.97%), Query Frame = 0
Query:    1 MELLAYFTCCNLQPAHLLLALRMAMAAAFKGKNFITAASFAQRLLELPDLSSERHADLRNKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALRPIYRGTPLVKCPYCGSAYQPAAKGSVCVTCGLSQIGVKTLGLVTSSSASA 145
            MEL AYFT CNLQPAHLLLALRMAM  AFK KNFITAASFAQRLLELPDL+SER+A+LR+KAQK+LQKSQQMARNE  LDYDERNPF +DC  L+PIYRG P+VKCPYC S+Y PA+  +VC TCG+SQ+GV+TLGLVT++++++
Sbjct: 1084 MELSAYFTHCNLQPAHLLLALRMAMGTAFKNKNFITAASFAQRLLELPDLASERNAELRDKAQKILQKSQQMARNEVDLDYDERNPFVIDCATLKPIYRGAPVVKCPYCSSSYSPASDKTVCQTCGISQVGVETLGLVTTTASTS 1228          
BLAST of mRNA_H-elongata_contig112811.1048.1 vs. uniprot
Match: A0A7S2FV00_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FV00_9STRA)

HSP 1 Score: 195 bits (496), Expect = 1.480e-59
Identity = 96/142 (67.61%), Postives = 117/142 (82.39%), Query Frame = 0
Query:    2 ELLAYFTCCNLQPAHLLLALRMAMAAAFKGKNFITAASFAQRLLELPDLSSERHADLRNKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALRPIYRGTPLVKCPYCGSAYQPAAKGSVCVTCGLSQIGVKTLGLVTSSSA 143
            EL AYFT CNLQPAHLLLAL+ AM + FK KN+ITAASFA RLLELP++SSE++ADL+ KAQKV+ KS++  RNEHTL YDERNPF++DCQA  P+YRG+P+VKC YCGSAYQP     +C TCG++ IGV+TLGL T  S+
Sbjct:  164 ELWAYFTHCNLQPAHLLLALKSAMISGFKIKNYITAASFAHRLLELPEVSSEKNADLKGKAQKVILKSEKEGRNEHTLQYDERNPFDIDCQAFVPVYRGSPVVKCAYCGSAYQPECTNKLCTTCGIALIGVETLGLPTGRSS 305          
BLAST of mRNA_H-elongata_contig112811.1048.1 vs. uniprot
Match: A0A7S3YID5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YID5_HETAK)

HSP 1 Score: 191 bits (485), Expect = 9.480e-59
Identity = 100/143 (69.93%), Postives = 116/143 (81.12%), Query Frame = 0
Query:    1 MELLAYFTCCNLQPAHLLLALRMAMAAAFKGKNFITAASFAQRLLELPDLSSERHADLRNKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALRPIYRGTPLVKCPYCGSAYQPAAKGSVCVTCGLSQIGVKTLGLVTSSSA 143
            MEL AYFT  NLQP HLLLALR+AMA+AFK KNFITAASFA+RLLELPD+SSE++ADL+ KAQKVLQKS+QM  NEH LDYDERNPF VD   L PIYRG+P V CP+C S YQP     +C TC +SQIGV+T+GLV+  +A
Sbjct:   95 MELGAYFTHQNLQPGHLLLALRLAMASAFKHKNFITAASFARRLLELPDISSEKNADLKLKAQKVLQKSEQMGSNEHALDYDERNPFAVDAADLVPIYRGSPEVTCPFCASHYQPRHANGLCATCNISQIGVETIGLVSQVAA 237          
BLAST of mRNA_H-elongata_contig112811.1048.1 vs. uniprot
Match: A0A7S3GXR2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GXR2_9STRA)

HSP 1 Score: 195 bits (495), Expect = 2.520e-57
Identity = 93/142 (65.49%), Postives = 119/142 (83.80%), Query Frame = 0
Query:    1 MELLAYFTCCNLQPAHLLLALRMAMAAAFKGKNFITAASFAQRLLELPDLSSERHADLRNKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALRPIYRGTPLVKCPYCGSAYQPAAKGSVCVTCGLSQIGVKTLGLVTSSS 142
            +EL AYFT CNLQP+HL+LAL+ AMA+AFK KNFI AASFA+RLLELPD++SE++AD R+KAQKVLQKS+Q  RNE+T+DYDERNPF +DC  L+P+Y+GTPLVKC YC + Y    KG +C+ CG+S +G+ T+GLVT S+
Sbjct:  355 LELAAYFTHCNLQPSHLMLALKTAMASAFKNKNFINAASFARRLLELPDMNSEKNADSRSKAQKVLQKSEQQGRNEYTIDYDERNPFSLDCSTLKPLYKGTPLVKCSYCAACYAVDYKGKLCLICGISTVGLDTVGLVTQSA 496          
BLAST of mRNA_H-elongata_contig112811.1048.1 vs. uniprot
Match: W7TRK7_9STRA (Coatomer subunit alpha n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRK7_9STRA)

HSP 1 Score: 196 bits (499), Expect = 2.130e-55
Identity = 96/142 (67.61%), Postives = 122/142 (85.92%), Query Frame = 0
Query:    2 ELLAYFTCCNLQPAHLLLALRMAMAAAFKGKNFITAASFAQRLLELPDLSSERHADLRNKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALRPIYRGTPLVKCPYCGSAYQPAAKGSVCVTCGLSQIGVKTLGLVTSSSA 143
            EL AYFT CNLQPAHLLLALRMAM +AFK +N+ITAASFA RLLE+P+++SE++A+LR KAQKVLQKS+QMARNEH ++YD+R  F +DC+ L PI RG P +KC YCGS+Y P +KG +CVTCG+SQ+G++TLGLVTS+ +
Sbjct: 1128 ELSAYFTHCNLQPAHLLLALRMAMVSAFKFQNYITAASFAHRLLEMPEMASEKNAELRLKAQKVLQKSEQMARNEHAIEYDDRQAFVIDCRTLLPIPRGAPCLKCSYCGSSYTPESKGVLCVTCGISQVGLETLGLVTSAGS 1269          
BLAST of mRNA_H-elongata_contig112811.1048.1 vs. uniprot
Match: A0A7S3GXJ7_9STRA (Coatomer subunit alpha n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GXJ7_9STRA)

HSP 1 Score: 195 bits (495), Expect = 7.360e-55
Identity = 93/142 (65.49%), Postives = 119/142 (83.80%), Query Frame = 0
Query:    1 MELLAYFTCCNLQPAHLLLALRMAMAAAFKGKNFITAASFAQRLLELPDLSSERHADLRNKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALRPIYRGTPLVKCPYCGSAYQPAAKGSVCVTCGLSQIGVKTLGLVTSSS 142
            +EL AYFT CNLQP+HL+LAL+ AMA+AFK KNFI AASFA+RLLELPD++SE++AD R+KAQKVLQKS+Q  RNE+T+DYDERNPF +DC  L+P+Y+GTPLVKC YC + Y    KG +C+ CG+S +G+ T+GLVT S+
Sbjct: 1112 LELAAYFTHCNLQPSHLMLALKTAMASAFKNKNFINAASFARRLLELPDMNSEKNADSRSKAQKVLQKSEQQGRNEYTIDYDERNPFSLDCSTLKPLYKGTPLVKCSYCAACYAVDYKGKLCLICGISTVGLDTVGLVTQSA 1253          
BLAST of mRNA_H-elongata_contig112811.1048.1 vs. uniprot
Match: A0A7S2RES0_9STRA (Coatomer subunit alpha n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RES0_9STRA)

HSP 1 Score: 184 bits (467), Expect = 4.340e-51
Identity = 93/140 (66.43%), Postives = 112/140 (80.00%), Query Frame = 0
Query:    2 ELLAYFTCCNLQPAHLLLALRMAMAAAFKGKNFITAASFAQRLLELPDLSSERHADLRNKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALRPIYRGTPLVKCPYCGSAYQPAAKGSVCVTCGLSQIGVKTLGLVTSS 141
            EL AY T CNLQP+HL LAL+ AM  AFK KNFITAASFA+RLLELPD+SSE++A L+ KAQKV+ KS+QMARNEH L YDERNPF++D     PIYRG+P+V+C YC +AY P  K  VC  CGLS +GV+T+GLVT+S
Sbjct: 1113 ELWAYMTHCNLQPSHLFLALKFAMGEAFKIKNFITAASFARRLLELPDMSSEKNATLKVKAQKVVLKSEQMARNEHQLHYDERNPFDIDSDTFLPIYRGSPVVRCAYCNAAYSPDMKNKVCRACGLSLVGVETIGLVTAS 1252          
BLAST of mRNA_H-elongata_contig112811.1048.1 vs. uniprot
Match: A0A7S1E1P1_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E1P1_9STRA)

HSP 1 Score: 168 bits (426), Expect = 1.070e-50
Identity = 89/141 (63.12%), Postives = 104/141 (73.76%), Query Frame = 0
Query:    2 ELLAYFTCCNLQPAHLLLALRMAMAAAFKGKNFITAASFAQRLLELPDLSSERHADLRNKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALRPIYRGTPLVKCPYCGSAYQ-PAAKGSVCVTCGLSQIGVKTLGLVTSS 141
            EL AYF+ CNLQP HLLLALR AM  AFK KN+I AA FA+RLLELPD++SER+ADLR KA KVLQKS+QMARNEH L YDE   F +DC+    I  GT  +KCPYCGS Y+    K  VC TC  + +GV+T+GLVT S
Sbjct:   32 ELAAYFSHCNLQPVHLLLALRSAMGVAFKHKNYIAAAGFARRLLELPDMNSERNADLRVKATKVLQKSEQMARNEHELAYDESTSFTIDCEKFTAIKAGTVSIKCPYCGSNYEGDGMKNKVCRTCSFATVGVQTIGLVTGS 172          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig112811.1048.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL95_ECTSI2.110e-7790.60Coatomer subunit alpha n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KXQ0_9PHAE5.390e-7788.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z8J6_9STRA2.270e-6375.17Coatomer subunit alpha n=1 Tax=Tribonema minus Tax... [more]
A0A7S2FV00_9STRA1.480e-5967.61Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S3YID5_HETAK9.480e-5969.93Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3GXR2_9STRA2.520e-5765.49Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
W7TRK7_9STRA2.130e-5567.61Coatomer subunit alpha n=2 Tax=Monodopsidaceae Tax... [more]
A0A7S3GXJ7_9STRA7.360e-5565.49Coatomer subunit alpha n=1 Tax=Spumella elongata T... [more]
A0A7S2RES0_9STRA4.340e-5166.43Coatomer subunit alpha n=1 Tax=Rhizochromulina mar... [more]
A0A7S1E1P1_9STRA1.070e-5063.12Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010714Coatomer, alpha subunit, C-terminalPFAMPF06957COPI_Ccoord: 2..142
e-value: 7.8E-51
score: 173.1
NoneNo IPR availablePANTHERPTHR19876COATOMERcoord: 3..136
NoneNo IPR availablePANTHERPTHR19876:SF1COATOMER SUBUNIT ALPHAcoord: 3..136
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..149
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig112811contigH-elongata_contig112811:1207..2067 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig112811.1048.1mRNA_H-elongata_contig112811.1048.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig112811 1207..2073 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig112811.1048.1 ID=prot_H-elongata_contig112811.1048.1|Name=mRNA_H-elongata_contig112811.1048.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=150bp
MELLAYFTCCNLQPAHLLLALRMAMAAAFKGKNFITAASFAQRLLELPDL
SSERHADLRNKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQALRPIYRG
TPLVKCPYCGSAYQPAAKGSVCVTCGLSQIGVKTLGLVTSSSASAGGKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010714Coatomer_asu_C