prot_H-elongata_contig112784.1045.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig112784.1045.1
Unique Name	prot_H-elongata_contig112784.1045.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	80

Homology

[Close]

BLAST of mRNA_H-elongata_contig112784.1045.1 vs. uniprot
Match: A0A6H5J4R7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4R7_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 2.990e-39
Identity = 71/79 (89.87%), Postives = 76/79 (96.20%), Query Frame = 0

Query:    1 RANVVITSYNVLRMDADVLRDQGWLFLVLDEAHVLRNPATRTAKAARALRSDHRLGLTGTPIQNSVLELWSLFQFLMPG 79
            RANVVITSYNVLR DADVL  QGWL+LVLDEAH+LRNPATRTAKAARALRS+HR+GLTGTPIQNSVLELWSLF+FLMPG
Sbjct:  968 RANVVITSYNVLRTDADVLGKQGWLYLVLDEAHLLRNPATRTAKAARALRSNHRVGLTGTPIQNSVLELWSLFEFLMPG 1046

[Close]

BLAST of mRNA_H-elongata_contig112784.1045.1 vs. uniprot
Match: D8LBB5_ECTSI (Essential abundant protein involved in regulation of transcription n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBB5_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 1.040e-38
Identity = 70/79 (88.61%), Postives = 76/79 (96.20%), Query Frame = 0

Query:    1 RANVVITSYNVLRMDADVLRDQGWLFLVLDEAHVLRNPATRTAKAARALRSDHRLGLTGTPIQNSVLELWSLFQFLMPG 79
            RANVVITSYNVLR DA+VL  QGWL+LVLDEAH+LRNPATRTAKAARALRS+HR+GLTGTPIQNSVLELWSLF+FLMPG
Sbjct: 1837 RANVVITSYNVLRTDAEVLGKQGWLYLVLDEAHLLRNPATRTAKAARALRSNHRVGLTGTPIQNSVLELWSLFEFLMPG 1915

[Close]

BLAST of mRNA_H-elongata_contig112784.1045.1 vs. uniprot
Match: A0A7S0BDZ4_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BDZ4_9RHOD)

HSP 1 Score: 99.4 bits (246), Expect = 1.210e-24
Identity = 45/78 (57.69%), Postives = 58/78 (74.36%), Query Frame = 0

Query:    2 ANVVITSYNVLRMDADVLRDQGWLFLVLDEAHVLRNPATRTAKAARALRSDHRLGLTGTPIQNSVLELWSLFQFLMPG 79
            A++V+TSY VL  D +  R   W + VLDE HV++NP TR AKA R + + HRL L+GTPIQN+VLELW++F FLMPG
Sbjct:   30 ADLVVTSYEVLASDLEHFRSIRWNYQVLDEGHVIKNPKTRAAKAVRCISASHRLLLSGTPIQNTVLELWAIFDFLMPG 107

[Close]

BLAST of mRNA_H-elongata_contig112784.1045.1 vs. uniprot
Match: A0A1B7N6B0_9AGAM (Uncharacterized protein n=2 Tax=Rhizopogon TaxID=5375 RepID=A0A1B7N6B0_9AGAM)

HSP 1 Score: 104 bits (260), Expect = 2.130e-24
Identity = 47/79 (59.49%), Postives = 60/79 (75.95%), Query Frame = 0

Query:    1 RANVVITSYNVLRMDADVLRDQGWLFLVLDEAHVLRNPATRTAKAARALRSDHRLGLTGTPIQNSVLELWSLFQFLMPG 79
            + +VVITSY V+R D   L D  WL+ +LDE HV++N  T+  KA +A+R+ HRL L+GTPIQN+VLELWSLF FLMPG
Sbjct: 1448 KKDVVITSYEVVRNDISTLEDFSWLYCILDEGHVIKNAKTKLTKAVKAIRAQHRLILSGTPIQNNVLELWSLFDFLMPG 1526

[Close]

BLAST of mRNA_H-elongata_contig112784.1045.1 vs. uniprot
Match: S3C1C1_OPHP1 (Tata-binding protein-associated factor mot1 n=1 Tax=Ophiostoma piceae (strain UAMH 11346) TaxID=1262450 RepID=S3C1C1_OPHP1)

HSP 1 Score: 104 bits (259), Expect = 2.900e-24
Identity = 45/79 (56.96%), Postives = 61/79 (77.22%), Query Frame = 0

Query:    1 RANVVITSYNVLRMDADVLRDQGWLFLVLDEAHVLRNPATRTAKAARALRSDHRLGLTGTPIQNSVLELWSLFQFLMPG 79
            + +++ITSY+V R D D+L    W ++VLDE H+++NP T+ + A + L S+HRL LTGTPIQN+VLELWSLF FLMPG
Sbjct: 1416 KTDIIITSYDVCRNDVDILEKHNWNYVVLDEGHLIKNPRTKISMAVKKLASNHRLILTGTPIQNNVLELWSLFDFLMPG 1494

[Close]

BLAST of mRNA_H-elongata_contig112784.1045.1 vs. uniprot
Match: A0A3D8RBA2_9HELO (Putative MOT1-transcriptional accessory protein n=2 Tax=Coleophoma TaxID=453209 RepID=A0A3D8RBA2_9HELO)

HSP 1 Score: 103 bits (258), Expect = 3.960e-24
Identity = 46/79 (58.23%), Postives = 62/79 (78.48%), Query Frame = 0

Query:    1 RANVVITSYNVLRMDADVLRDQGWLFLVLDEAHVLRNPATRTAKAARALRSDHRLGLTGTPIQNSVLELWSLFQFLMPG 79
            + ++VITSY++ R DADVL    W +LVLDE H+++NP  +   A ++L+S+HRL L+GTPIQN+VLELWSLF FLMPG
Sbjct: 1410 KTDIVITSYDICRNDADVLMPLNWNYLVLDEGHLIKNPRAKVTVAVKSLQSNHRLILSGTPIQNNVLELWSLFDFLMPG 1488

[Close]

BLAST of mRNA_H-elongata_contig112784.1045.1 vs. uniprot
Match: G4N3K7_MAGO7 (TATA-binding protein-associated factor MOT1 n=7 Tax=Pyricularia TaxID=48558 RepID=G4N3K7_MAGO7)

HSP 1 Score: 103 bits (258), Expect = 3.960e-24
Identity = 47/79 (59.49%), Postives = 62/79 (78.48%), Query Frame = 0

Query:    1 RANVVITSYNVLRMDADVLRDQGWLFLVLDEAHVLRNPATRTAKAARALRSDHRLGLTGTPIQNSVLELWSLFQFLMPG 79
            +A++VITSY+V R D DV+    W ++VLDE H+++NP  +T+ A + L S+HRL LTGTPIQN+VLELWSLF FLMPG
Sbjct: 1409 KADIVITSYDVCRNDIDVIDKYNWNYVVLDEGHLIKNPKAKTSIAVKRLMSNHRLILTGTPIQNNVLELWSLFDFLMPG 1487

[Close]

BLAST of mRNA_H-elongata_contig112784.1045.1 vs. uniprot
Match: A0A1W2TMP8_ROSNE (Putative tata-binding protein-associated factor mot1 protein n=7 Tax=Fungi TaxID=4751 RepID=A0A1W2TMP8_ROSNE)

HSP 1 Score: 103 bits (258), Expect = 3.960e-24
Identity = 46/77 (59.74%), Postives = 60/77 (77.92%), Query Frame = 0

Query:    3 NVVITSYNVLRMDADVLRDQGWLFLVLDEAHVLRNPATRTAKAARALRSDHRLGLTGTPIQNSVLELWSLFQFLMPG 79
            ++V+TSY V R DAD+L  Q W ++VLDE H+++NP  + + A + L S+HRL LTGTPIQN+VLELWSLF FLMPG
Sbjct: 1413 DIVVTSYEVCRNDADLLEKQSWNYIVLDEGHLIKNPKAKISLAVKKLASNHRLILTGTPIQNNVLELWSLFDFLMPG 1489

[Close]

BLAST of mRNA_H-elongata_contig112784.1045.1 vs. uniprot
Match: A0A0L0NL35_TOLOC (Putative helicase mot1 n=2 Tax=Tolypocladium TaxID=29909 RepID=A0A0L0NL35_TOLOC)

HSP 1 Score: 103 bits (258), Expect = 3.970e-24
Identity = 45/79 (56.96%), Postives = 61/79 (77.22%), Query Frame = 0

Query:    1 RANVVITSYNVLRMDADVLRDQGWLFLVLDEAHVLRNPATRTAKAARALRSDHRLGLTGTPIQNSVLELWSLFQFLMPG 79
            + ++VITSY+V R D D+L +  W ++VLDE H+++NP  +  +A + L S+HRL LTGTPIQN+VLELWSLF FLMPG
Sbjct: 1412 KTDIVITSYDVCRNDTDILEEHNWNYMVLDEGHLIKNPKAKITQAVKRLVSNHRLILTGTPIQNNVLELWSLFDFLMPG 1490

[Close]

BLAST of mRNA_H-elongata_contig112784.1045.1 vs. uniprot
Match: A0A0C3NT19_PISTI (Helicase ATP-binding domain-containing protein n=1 Tax=Pisolithus tinctorius Marx 270 TaxID=870435 RepID=A0A0C3NT19_PISTI)

HSP 1 Score: 103 bits (257), Expect = 5.400e-24
Identity = 48/77 (62.34%), Postives = 59/77 (76.62%), Query Frame = 0

Query:    3 NVVITSYNVLRMDADVLRDQGWLFLVLDEAHVLRNPATRTAKAARALRSDHRLGLTGTPIQNSVLELWSLFQFLMPG 79
            +VVITSY V+R D   L D  WL+ VLDE HV+RN  T+  KA +A+++ HRL L+GTPIQN+VLELWSLF FLMPG
Sbjct: 1454 DVVITSYEVVRNDISSLEDINWLYCVLDEGHVIRNAKTKLTKAVKAIQAQHRLILSGTPIQNNVLELWSLFDFLMPG 1530

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig112784.1045.1 vs. uniprot

BLAST of mRNA_H-elongata_contig112784.1045.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5J4R7_9PHAE	2.990e-39	89.87	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LBB5_ECTSI	1.040e-38	88.61	Essential abundant protein involved in regulation ...	[more]
A0A7S0BDZ4_9RHOD	1.210e-24	57.69	Hypothetical protein (Fragment) n=1 Tax=Rhodosorus...	[more]
A0A1B7N6B0_9AGAM	2.130e-24	59.49	Uncharacterized protein n=2 Tax=Rhizopogon TaxID=5...	[more]
S3C1C1_OPHP1	2.900e-24	56.96	Tata-binding protein-associated factor mot1 n=1 Ta...	[more]
A0A3D8RBA2_9HELO	3.960e-24	58.23	Putative MOT1-transcriptional accessory protein n=...	[more]
G4N3K7_MAGO7	3.960e-24	59.49	TATA-binding protein-associated factor MOT1 n=7 Ta...	[more]
A0A1W2TMP8_ROSNE	3.960e-24	59.74	Putative tata-binding protein-associated factor mo...	[more]
A0A0L0NL35_TOLOC	3.970e-24	56.96	Putative helicase mot1 n=2 Tax=Tolypocladium TaxID...	[more]
A0A0C3NT19_PISTI	5.400e-24	62.34	Helicase ATP-binding domain-containing protein n=1...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038718	SNF2-like, N-terminal domain superfamily	GENE3D	3.40.50.10810		coord: 1..79 e-value: 1.6E-31 score: 111.1
IPR000330	SNF2-related, N-terminal domain	PFAM	PF00176	SNF2_N	coord: 2..78 e-value: 2.3E-24 score: 85.8
None	No IPR available	PANTHER	PTHR36498	FAMILY NOT NAMED	coord: 1..79
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 1..79 score: 14.263
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..79

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig112784	contig	H-elongata_contig112784:68..801 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig112784.1045.1	mRNA_H-elongata_contig112784.1045.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig112784 68..801 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig112784.1045.1 ID=prot_H-elongata_contig112784.1045.1|Name=mRNA_H-elongata_contig112784.1045.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=80bp
RANVVITSYNVLRMDADVLRDQGWLFLVLDEAHVLRNPATRTAKAARALR
SDHRLGLTGTPIQNSVLELWSLFQFLMPG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR038718	SNF2-like_sf
IPR000330	SNF2_N
IPR014001	Helicase_ATP-bd
IPR027417	P-loop_NTPase