prot_H-elongata_contig112684.1036.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig112684.1036.1
Unique Nameprot_H-elongata_contig112684.1036.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length150
Homology
BLAST of mRNA_H-elongata_contig112684.1036.1 vs. uniprot
Match: D7FHG3_ECTSI (40S ribosomal protein S8 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHG3_ECTSI)

HSP 1 Score: 208 bits (529), Expect = 7.080e-66
Identity = 112/168 (66.67%), Postives = 121/168 (72.02%), Query Frame = 0
Query:    1 MGRPAAMTKLGHKCVHPVRCRGGNMKFRALRLGTGNFSRSNEVRT-------------------CKTLVKNAIVVVDAHPFKKWYESHYGVAVSVKKGKKTPSKDEEEEASKSDHVKRKHVKRQADRKLDSLLNKQFTSGRFLACISPRPGQCGRCDGYILEGNELEF 149
            MGRPAA TKLGHK VHPVRCRGGNMK+RALRL +GNFS   EV T                    KTLVKNAIVVVDAHPFK WYE+HYGV + +KKGKK     EEE  +KSDHVKRK  KRQ DR L +LL++Q  SGRFLACIS RPGQ GRCDGYILEG ELEF
Sbjct:   29 MGRPAANTKLGHKRVHPVRCRGGNMKYRALRLDSGNFSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKHWYENHYGVVIGLKKGKKAAPV-EEEAVAKSDHVKRKLAKRQTDRTLSTLLDEQVASGRFLACISSRPGQSGRCDGYILEGKELEF 195          
BLAST of mRNA_H-elongata_contig112684.1036.1 vs. uniprot
Match: A0A7S2USH6_9STRA (40S ribosomal protein S8 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USH6_9STRA)

HSP 1 Score: 187 bits (475), Expect = 2.440e-57
Identity = 100/170 (58.82%), Postives = 115/170 (67.65%), Query Frame = 0
Query:    1 MGRPAAMTKLGHKCVHPVRCRGGNMKFRALRLGTGNFS-------------------RSNEVRTCKTLVKNAIVVVDAHPFKKWYESHYGVAVSVKKGKKTPSKDE--EEEASKSDHVKRKHVKRQADRKLDSLLNKQFTSGRFLACISPRPGQCGRCDGYILEGNELEF 149
            MGRPAA TKLG K VHPVRC GGNMK+RA+RL  G +S                    +NE+   KTLVKNA+V++DAHPFK WYE+HYGV +  KKGK+ P KDE  +E+A KS HV+RK  KRQ DR L   L+ QF  GR LACIS RPGQ GR DGYILEG ELEF
Sbjct:   49 MGRPAANTKLGTKRVHPVRCMGGNMKYRAMRLEAGTYSWGTEAISRKARILDVVYNASNNELVRTKTLVKNAVVLIDAHPFKAWYEAHYGVVIGKKKGKRMPKKDEADDEDAKKSSHVQRKIAKRQKDRTLMQNLDDQFVGGRLLACISSRPGQSGRADGYILEGKELEF 218          
BLAST of mRNA_H-elongata_contig112684.1036.1 vs. uniprot
Match: A0A836CLT8_9STRA (40S ribosomal protein S8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLT8_9STRA)

HSP 1 Score: 180 bits (456), Expect = 1.030e-54
Identity = 97/172 (56.40%), Postives = 116/172 (67.44%), Query Frame = 0
Query:    1 MGRPAAMTKLGHKCVHPVRCRGGNMKFRALRLGTGNFSRSNEVRT-------------------CKTLVKNAIVVVDAHPFKKWYESHYGVAVSVKKGKKTPS----KDEEEEASKSDHVKRKHVKRQADRKLDSLLNKQFTSGRFLACISPRPGQCGRCDGYILEGNELEF 149
            +GRPAA TK+G   +  VRCRGGN+KFRALRL TGN+S   EV T                    KTLVK A+V +DA PF++WYE+HYG+A+ VKKGK+  +       +EEA KSDHV+RK   RQ  R LD+LL++QF SGR LACIS RPGQ GRCDGYILEG ELEF
Sbjct:   29 LGRPAANTKMGATRIRTVRCRGGNLKFRALRLETGNYSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKGAVVSIDATPFRQWYEAHYGIAIGVKKGKRAAAGKAAATTDEEAKKSDHVQRKLAARQKTRALDTLLDEQFASGRILACISSRPGQSGRCDGYILEGKELEF 200          
BLAST of mRNA_H-elongata_contig112684.1036.1 vs. uniprot
Match: A0A7S1Z304_TRICV (40S ribosomal protein S8 n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z304_TRICV)

HSP 1 Score: 176 bits (447), Expect = 1.760e-53
Identity = 95/168 (56.55%), Postives = 114/168 (67.86%), Query Frame = 0
Query:    1 MGRPAAMTKLGHKCVHPVRCRGGNMKFRALRLGTGNFSRSNEVRT-------------------CKTLVKNAIVVVDAHPFKKWYESHYGVAVSVKKGKKTPSKDEEEEASKSDHVKRKHVKRQADRKLDSLLNKQFTSGRFLACISPRPGQCGRCDGYILEGNELEF 149
            +GRPAAMTK+G K VH VRCRGGN+KFRALRL +GNFS   EV T                    KTLVK AIV++DAHPFK+WYE+HYGV + VKKG+K  +  +EE   KS+ V+RK   RQ +R L+  L+ QF SGR LA I+ RPGQCGRCDG +LEG EL F
Sbjct:   29 LGRPAAMTKIGEKRVHEVRCRGGNLKFRALRLDSGNFSWGTEVCTRKVRILDVTYNASNNELVRTKTLVKGAIVLIDAHPFKEWYEAHYGVKIGVKKGQKAHA--DEEAPKKSERVQRKLAARQKNRTLEQPLDHQFASGRLLAKITSRPGQCGRCDGVVLEGAELHF 194          
BLAST of mRNA_H-elongata_contig112684.1036.1 vs. uniprot
Match: A0A7M5V503_9CNID (40S ribosomal protein S8 n=2 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5V503_9CNID)

HSP 1 Score: 176 bits (447), Expect = 2.120e-53
Identity = 92/169 (54.44%), Postives = 115/169 (68.05%), Query Frame = 0
Query:    1 MGRPAAMTKLGHKCVHPVRCRGGNMKFRALRLGTGNFS-------------------RSNEVRTCKTLVKNAIVVVDAHPFKKWYESHYGVAVSVKKGKKTPSKDEEE-EASKSDHVKRKHVKRQADRKLDSLLNKQFTSGRFLACISPRPGQCGRCDGYILEGNELEF 149
            +GRPAA TK+G K +HPVRCRGGN+KFRA+RL  GN+S                    +NE+   KTLVKNAI+++DA PFK+W+E+HYGVAV  KKG K P  +E+    ++S H K K   R+ D K+D  L +QFTSGR +ACIS RPGQ GRCDGYILEG EL+F
Sbjct:   29 LGRPAANTKIGVKRIHPVRCRGGNLKFRAMRLDAGNYSWGSESITRKTRVLDVVYNASNNELVRTKTLVKNAIILIDATPFKQWFEAHYGVAVGRKKGHKIPEGEEDPLNKTRSKHAKAKIAARKPDSKIDHHLEEQFTSGRVMACISSRPGQSGRCDGYILEGKELDF 197          
BLAST of mRNA_H-elongata_contig112684.1036.1 vs. uniprot
Match: A0A485KRP7_9STRA (40S ribosomal protein S8 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KRP7_9STRA)

HSP 1 Score: 172 bits (435), Expect = 5.380e-52
Identity = 95/168 (56.55%), Postives = 111/168 (66.07%), Query Frame = 0
Query:    1 MGRPAAMTKLGHKCVHPVRCRGGNMKFRALRLGTGNFS-------------------RSNEVRTCKTLVKNAIVVVDAHPFKKWYESHYGVAVSVKKGKKTPSKDEEEEASKSDHVKRKHVKRQADRKLDSLLNKQFTSGRFLACISPRPGQCGRCDGYILEGNELEF 149
            MGR  A TKLG K V+PVR RGGNMKFRALRL TGNFS                    +NE+    TLVKNAI+ +DA PF++WYE+HYGV + VKK  +    D+EEE  +S HV+RK   RQ  R+LD  L++QF  GR LACIS RPGQ GRCDGYILEG ELEF
Sbjct:    1 MGRQPANTKLGAKRVNPVRVRGGNMKFRALRLDTGNFSWGTEAIAHKTRVLIVLYNASNNELVRTNTLVKNAIIQIDATPFRQWYEAHYGVKIGVKKSAEA---DKEEEVKQSSHVQRKLAARQRTRELDPRLDEQFQQGRLLACISSRPGQSGRCDGYILEGKELEF 165          
BLAST of mRNA_H-elongata_contig112684.1036.1 vs. uniprot
Match: B7FP80_PHATC (40S ribosomal protein S8 n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FP80_PHATC)

HSP 1 Score: 172 bits (435), Expect = 1.280e-51
Identity = 94/169 (55.62%), Postives = 113/169 (66.86%), Query Frame = 0
Query:    1 MGRPAAMTKLGHKCVHPVRCRGGNMKFRALRLGTGNFSRSNEVRT-------------------CKTLVKNAIVVVDAHPFKKWYESHYGVAVSVKK-GKKTPSKDEEEEASKSDHVKRKHVKRQADRKLDSLLNKQFTSGRFLACISPRPGQCGRCDGYILEGNELEF 149
            +GRPAAMTK+G   +HPVRCRGGNMKFRALRL +GNFS   EV T                    KTLVK AIV++DAHPFK WY+SHYGV + +KK G +  ++   +   KS  V++K   RQA+R LDS+L+ QF SGR LA I+ RPGQ GRCDGYILEG EL F
Sbjct:   29 LGRPAAMTKIGEPRIHPVRCRGGNMKFRALRLDSGNFSWGTEVCTRKVRVLDVTYNASNNELVRTKTLVKGAIVLIDAHPFKNWYDSHYGVTIGLKKTGGEDRTQPSVDLTEKSTQVQKKLKSRQANRSLDSVLDHQFASGRLLAKITSRPGQTGRCDGYILEGAELAF 197          
BLAST of mRNA_H-elongata_contig112684.1036.1 vs. uniprot
Match: A0A6G0XHQ6_9STRA (40S ribosomal protein S8 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHQ6_9STRA)

HSP 1 Score: 171 bits (434), Expect = 1.810e-51
Identity = 98/169 (57.99%), Postives = 113/169 (66.86%), Query Frame = 0
Query:    1 MGRPAAMTKLGHKCVHPVRCRGGNMKFRALRLGTGNFS-------------------RSNEVRTCKTLVKNAIVVVDAHPFKKWYESHYGVAVSVKKGKKTPSKDEEEEASK-SDHVKRKHVKRQADRKLDSLLNKQFTSGRFLACISPRPGQCGRCDGYILEGNELEF 149
            MGR  A TKLG K V+PVR RGGNMKFRALRL TGNFS                    +NE+    TLVKNAIV +DA PF++WYE+HYGV + VKK ++    D +EEA+K S HV+RK   RQ  R LD+ L +QFTSGR  ACIS RPGQ GRCDGYILEG ELEF
Sbjct:   29 MGRQPANTKLGAKRVNPVRVRGGNMKFRALRLDTGNFSWGTEAVSHKTRVLIVTYNASNNELVRTNTLVKNAIVQIDATPFRQWYEAHYGVKIGVKKNQE----DAKEEAAKGSSHVQRKFAARQRTRDLDTRLEEQFTSGRLYACISSRPGQSGRCDGYILEGKELEF 193          
BLAST of mRNA_H-elongata_contig112684.1036.1 vs. uniprot
Match: B8CB96_THAPS (40S ribosomal protein S8 n=2 Tax=Ochrophyta TaxID=2696291 RepID=B8CB96_THAPS)

HSP 1 Score: 171 bits (432), Expect = 3.120e-51
Identity = 93/168 (55.36%), Postives = 108/168 (64.29%), Query Frame = 0
Query:    1 MGRPAAMTKLGHKCVHPVRCRGGNMKFRALRLGTGNFSRSNEVRT-------------------CKTLVKNAIVVVDAHPFKKWYESHYGVAVSVKKGKKTPSKDEEEEASKSDHVKRKHVKRQADRKLDSLLNKQFTSGRFLACISPRPGQCGRCDGYILEGNELEF 149
            +GRPAAMTK+G K +H VRCRGGN+KFRALRL +GNFS   EV T                    KTLVK AIV+VDAHPFK WYESHYGV + +KKG+      EEEE  +S HV+RK   RQ  R L+  ++ Q  SGR  A I+ RPGQ GRCDG ILEG EL F
Sbjct:   29 LGRPAAMTKIGEKRIHTVRCRGGNLKFRALRLDSGNFSWGTEVCTRKVRVLDVVYNASNNELVRTKTLVKGAIVLVDAHPFKSWYESHYGVKIGIKKGQAAA---EEEEVKQSSHVQRKLAARQKGRSLEDAIDHQIASGRLYAKITSRPGQSGRCDGQILEGAELSF 193          
BLAST of mRNA_H-elongata_contig112684.1036.1 vs. uniprot
Match: A0A812SFI7_SYMMI (40S ribosomal protein S8 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SFI7_SYMMI)

HSP 1 Score: 170 bits (431), Expect = 5.650e-51
Identity = 94/168 (55.95%), Postives = 111/168 (66.07%), Query Frame = 0
Query:    1 MGRPAAMTKLGHKCVHPVRCRGGNMKFRALRLGTGNFSRSNEVRT-------------------CKTLVKNAIVVVDAHPFKKWYESHYGVAVSVKKGKKTPSKDEEEEASKSDHVKRKHVKRQADRKLDSLLNKQFTSGRFLACISPRPGQCGRCDGYILEGNELEF 149
            +GRP A TKLG   +H VRCRGGN+KFRA+RL TGNFS  +EV T                    KTLVKN+I+ VDA PF+ WYE HYGV V VKK KKT ++ E+ E  KS  ++RK  +RQ  R LD  L+  F+SGR LACIS RPGQ GRCDGYILEG EL+F
Sbjct:   29 LGRPPANTKLGASRIHTVRCRGGNLKFRAMRLDTGNFSWGSEVCTRKTRVLDVVYNASNNELVRTKTLVKNSIIQVDATPFRAWYEQHYGVKVGVKKAKKTAAEGEDTE-KKSHSLQRKLAERQKTRTLDPALDDGFSSGRLLACISSRPGQSGRCDGYILEGKELDF 195          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig112684.1036.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHG3_ECTSI7.080e-6666.6740S ribosomal protein S8 n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S2USH6_9STRA2.440e-5758.8240S ribosomal protein S8 n=1 Tax=Fibrocapsa japoni... [more]
A0A836CLT8_9STRA1.030e-5456.4040S ribosomal protein S8 n=1 Tax=Tribonema minus T... [more]
A0A7S1Z304_TRICV1.760e-5356.5540S ribosomal protein S8 n=1 Tax=Trieres chinensis... [more]
A0A7M5V503_9CNID2.120e-5354.4440S ribosomal protein S8 n=2 Tax=Clytia hemisphaer... [more]
A0A485KRP7_9STRA5.380e-5256.5540S ribosomal protein S8 n=1 Tax=Aphanomyces stell... [more]
B7FP80_PHATC1.280e-5155.6240S ribosomal protein S8 n=2 Tax=Phaeodactylum tri... [more]
A0A6G0XHQ6_9STRA1.810e-5157.9940S ribosomal protein S8 n=1 Tax=Aphanomyces eutei... [more]
B8CB96_THAPS3.120e-5155.3640S ribosomal protein S8 n=2 Tax=Ochrophyta TaxID=... [more]
A0A812SFI7_SYMMI5.650e-5155.9540S ribosomal protein S8 n=1 Tax=Symbiodinium micr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.10.450coord: 4..48
e-value: 1.6E-11
score: 46.4
IPR042563Ribosomal protein S8e subdomain, eukaryotesGENE3D1.10.168.20coord: 60..121
e-value: 1.4E-17
score: 66.0
IPR022309Ribosomal protein S8e/ribosomal biogenesis NSA2PFAMPF01201Ribosomal_S8ecoord: 1..47
e-value: 6.5E-9
score: 36.1
coord: 40..142
e-value: 4.4E-13
score: 49.6
IPR001047Ribosomal protein S8ePANTHERPTHR1039440S RIBOSOMAL PROTEIN S8coord: 1..45
coord: 41..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig112684contigH-elongata_contig112684:1563..2012 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig112684.1036.1mRNA_H-elongata_contig112684.1036.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig112684 1563..2012 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig112684.1036.1 ID=prot_H-elongata_contig112684.1036.1|Name=mRNA_H-elongata_contig112684.1036.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=150bp
MGRPAAMTKLGHKCVHPVRCRGGNMKFRALRLGTGNFSRSNEVRTCKTLV
KNAIVVVDAHPFKKWYESHYGVAVSVKKGKKTPSKDEEEEASKSDHVKRK
HVKRQADRKLDSLLNKQFTSGRFLACISPRPGQCGRCDGYILEGNELEF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042563Ribosomal_protein_S8e_euk
IPR022309Ribosomal_S8e/biogenesis_NSA2
IPR001047Ribosomal_S8e