prot_H-elongata_contig1126.1027.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1126.1027.1
Unique Nameprot_H-elongata_contig1126.1027.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length90
Homology
BLAST of mRNA_H-elongata_contig1126.1027.1 vs. uniprot
Match: UPI00098A835B (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=UPI00098A835B)

HSP 1 Score: 55.5 bits (132), Expect = 6.570e-7
Identity = 28/85 (32.94%), Postives = 44/85 (51.76%), Query Frame = 0
Query:    3 IRFGNVTLYDDTAVKNNYIFPLGFMVVIDAEYNARIVAQMPLADSTTDTLIWVLNKYIASRERLPPRVFVTDADAAMTGAARKVM 87
            + FG+V ++D T   N Y  P    V ++  +   +     + D T DT +WVL  ++ +  +  PR  +TD DAAM  A RKV+
Sbjct:  339 LDFGDVIVFDSTYKMNRYGMPFIPFVGLNNHHCTTVFGCAVVLDQTEDTYVWVLQTFLRAHCQKKPRSVITDGDAAMIRAVRKVL 423          
BLAST of mRNA_H-elongata_contig1126.1027.1 vs. uniprot
Match: A0A6A3CVF4_HIBSY (Protein FAR1-RELATED SEQUENCE n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3CVF4_HIBSY)

HSP 1 Score: 55.1 bits (131), Expect = 8.810e-7
Identity = 31/87 (35.63%), Postives = 45/87 (51.72%), Query Frame = 0
Query:    3 IRFGNVTLYDDTAVKNNYIFPLGFMVVIDAEYNARIVAQMPLADSTTDTLIWVLNKYIASRERLPPRVFVTDADAAMTGAARKVMPN 89
            I FG+V  +D T   N Y  P+  +V ++  +N  + A   +AD T+ T  WVL K++       P   VTD D AM  A + V+PN
Sbjct:  152 ICFGDVIAFDTTYKDNLYGRPIMPIVGVNRHHNTIMFATAIIADETSQTFEWVLQKFLEVMMNKSPISVVTDGDRAMQRAIKSVIPN 238          
BLAST of mRNA_H-elongata_contig1126.1027.1 vs. uniprot
Match: UPI000E704368 (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E704368)

HSP 1 Score: 54.3 bits (129), Expect = 1.520e-6
Identity = 29/86 (33.72%), Postives = 39/86 (45.35%), Query Frame = 0
Query:    4 RFGNVTLYDDTAVKNNYIFPLGFMVVIDAEYNARIVAQMPLADSTTDTLIWVLNKYIASRERLPPRVFVTDADAAMTGAARKVMPN 89
            +FG V  +D T   N Y  P      ++  Y         L D T  T IW+ + +I +     P   +TD DAAMT A +KV PN
Sbjct:    5 QFGEVVFFDTTYRTNKYGMPFAPFTGVNHHYQTIQFGCALLQDETEPTFIWLFHIWIEAMRGQHPSAIITDQDAAMTTAIKKVFPN 90          
BLAST of mRNA_H-elongata_contig1126.1027.1 vs. uniprot
Match: A0A8I7BB90_HORVV (Protein FAR1-RELATED SEQUENCE n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=A0A8I7BB90_HORVV)

HSP 1 Score: 53.5 bits (127), Expect = 2.930e-6
Identity = 27/87 (31.03%), Postives = 46/87 (52.87%), Query Frame = 0
Query:    3 IRFGNVTLYDDTAVKNNYIFPLGFMVVIDAEYNARIVAQMPLADSTTDTLIWVLNKYIASRERLPPRVFVTDADAAMTGAARKVMPN 89
            + +G+VT++D T   N Y  P    V ++      + A    +D T  T +W+L  ++ +  +  P+  +TD DAAM  A RKV+P+
Sbjct:  268 LDYGDVTVFDSTYNMNRYGMPFIPFVGLNNHRCTMVFACAIFSDETEGTYVWLLETFLKANCQKKPQSVITDGDAAMIRALRKVLPD 354          
BLAST of mRNA_H-elongata_contig1126.1027.1 vs. uniprot
Match: UPI001ABC108A (protein FAR1-RELATED SEQUENCE 5-like n=4 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=UPI001ABC108A)

HSP 1 Score: 53.5 bits (127), Expect = 3.000e-6
Identity = 28/85 (32.94%), Postives = 43/85 (50.59%), Query Frame = 0
Query:    3 IRFGNVTLYDDTAVKNNYIFPLGFMVVIDAEYNARIVAQMPLADSTTDTLIWVLNKYIASRERLPPRVFVTDADAAMTGAARKVM 87
            + FG+VT++D T   N Y  P    V +       +     ++D T DT +WVL  ++ +  +  PR  +TD DA M  A RKV+
Sbjct:   53 LDFGDVTVFDITYKMNRYGMPFIPFVGLTNHRCTTVFGCAVVSDETEDTYVWVLQTFLRAHYQKKPRSVITDRDATMIRAIRKVL 137          
BLAST of mRNA_H-elongata_contig1126.1027.1 vs. uniprot
Match: UPI000D0D3B70 (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=UPI000D0D3B70)

HSP 1 Score: 53.1 bits (126), Expect = 4.110e-6
Identity = 26/86 (30.23%), Postives = 43/86 (50.00%), Query Frame = 0
Query:    5 FGNVTLYDDTAVKNNYIFPLGFMVVIDAEYNARIVAQMPLADSTTDTLIWVLNKYIASRERLPPRVFVTDADAAMTGAARKVMPNT 90
            FG++ ++D T   N Y  P    + +D   +  +     ++D T  +  W+L  ++ +     PR  +TD DAAM  A +KVMP T
Sbjct:  145 FGDLVVFDSTYRVNRYNLPFVPFIGVDHHRSTIVFGVGIVSDETVSSYEWLLQSFLEAMSHKNPRSVITDGDAAMRKAIKKVMPRT 230          
BLAST of mRNA_H-elongata_contig1126.1027.1 vs. uniprot
Match: UPI000E6F9D9F (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6F9D9F)

HSP 1 Score: 52.8 bits (125), Expect = 5.720e-6
Identity = 27/86 (31.40%), Postives = 40/86 (46.51%), Query Frame = 0
Query:    4 RFGNVTLYDDTAVKNNYIFPLGFMVVIDAEYNARIVAQMPLADSTTDTLIWVLNKYIASRERLPPRVFVTDADAAMTGAARKVMPN 89
            +FG+V  +D T   N Y  P      ++  Y         L D T  T  W+ +K++ +     P   +T+ DAAM GA +KV PN
Sbjct:  108 QFGDVVFFDTTYRTNKYEMPFAPFTGVNHHYQNIQFGCALLQDETEVTFSWLFSKWLEAMGEKHPSAIITNQDAAMVGAIKKVFPN 193          
BLAST of mRNA_H-elongata_contig1126.1027.1 vs. uniprot
Match: UPI00052FF5CB (protein FAR1-RELATED SEQUENCE 5 n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=UPI00052FF5CB)

HSP 1 Score: 52.0 bits (123), Expect = 1.030e-5
Identity = 26/86 (30.23%), Postives = 42/86 (48.84%), Query Frame = 0
Query:    5 FGNVTLYDDTAVKNNYIFPLGFMVVIDAEYNARIVAQMPLADSTTDTLIWVLNKYIASRERLPPRVFVTDADAAMTGAARKVMPNT 90
            FG++ ++D T   N Y  P    + +D   +  +     ++D T  +  W+L  ++       PR  +TD DAAM  A +KVMP T
Sbjct:  239 FGDLVVFDSTYRVNRYNLPFVPFIGVDHHRSTIVFGVGIVSDETVSSYEWLLQSFLEVMSHKNPRSVITDGDAAMRKAIKKVMPRT 324          
BLAST of mRNA_H-elongata_contig1126.1027.1 vs. uniprot
Match: A0A0Q3IKU7_BRADI (Protein FAR1-RELATED SEQUENCE (Fragment) n=5 Tax=Brachypodium distachyon TaxID=15368 RepID=A0A0Q3IKU7_BRADI)

HSP 1 Score: 52.0 bits (123), Expect = 1.070e-5
Identity = 26/86 (30.23%), Postives = 42/86 (48.84%), Query Frame = 0
Query:    5 FGNVTLYDDTAVKNNYIFPLGFMVVIDAEYNARIVAQMPLADSTTDTLIWVLNKYIASRERLPPRVFVTDADAAMTGAARKVMPNT 90
            FG++ ++D T   N Y  P    + +D   +  +     ++D T  +  W+L  ++       PR  +TD DAAM  A +KVMP T
Sbjct:  232 FGDLVVFDSTYRVNRYNLPFVPFIGVDHHRSTIVFGVGIVSDETVSSYEWLLQSFLEVMSHKNPRSVITDGDAAMRKAIKKVMPRT 317          
BLAST of mRNA_H-elongata_contig1126.1027.1 vs. uniprot
Match: UPI00098ADE8C (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=UPI00098ADE8C)

HSP 1 Score: 51.6 bits (122), Expect = 1.430e-5
Identity = 26/85 (30.59%), Postives = 46/85 (54.12%), Query Frame = 0
Query:    3 IRFGNVTLYDDTAVKNNYIFPLGFMVVIDAEYNARIVAQMPLADSTTDTLIWVLNKYIASRERLPPRVFVTDADAAMTGAARKVM 87
            + +G+V ++D+T   N Y  P    V ++      + A   ++D T  T +W+LN ++ +  +  P+  +TD DAAM  A RKV+
Sbjct:  282 LDYGDVVVFDNTYKMNRYGMPFIPFVGLNNHRCTTVFACAIVSDETEATYVWLLNTFLKANCQKRPKSVITDGDAAMIRAIRKVL 366          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1126.1027.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
UPI00098A835B6.570e-732.94protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Aegil... [more]
A0A6A3CVF4_HIBSY8.810e-735.63Protein FAR1-RELATED SEQUENCE n=1 Tax=Hibiscus syr... [more]
UPI000E7043681.520e-633.72protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Papav... [more]
A0A8I7BB90_HORVV2.930e-631.03Protein FAR1-RELATED SEQUENCE n=1 Tax=Hordeum vulg... [more]
UPI001ABC108A3.000e-632.94protein FAR1-RELATED SEQUENCE 5-like n=4 Tax=Aegil... [more]
UPI000D0D3B704.110e-630.23protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Brach... [more]
UPI000E6F9D9F5.720e-631.40protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Papav... [more]
UPI00052FF5CB1.030e-530.23protein FAR1-RELATED SEQUENCE 5 n=1 Tax=Brachypodi... [more]
A0A0Q3IKU7_BRADI1.070e-530.23Protein FAR1-RELATED SEQUENCE (Fragment) n=5 Tax=B... [more]
UPI00098ADE8C1.430e-530.59protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Aegil... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018289MULE transposase domainPFAMPF10551MULEcoord: 8..90
e-value: 9.2E-8
score: 32.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1126contigH-elongata_contig1126:4136..4405 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1126.1027.1mRNA_H-elongata_contig1126.1027.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1126 4136..4405 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1126.1027.1 ID=prot_H-elongata_contig1126.1027.1|Name=mRNA_H-elongata_contig1126.1027.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=90bp
LGIRFGNVTLYDDTAVKNNYIFPLGFMVVIDAEYNARIVAQMPLADSTTD
TLIWVLNKYIASRERLPPRVFVTDADAAMTGAARKVMPNT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018289MULE_transposase_dom