prot_H-elongata_contig112596.1026.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig112596.1026.1
Unique Nameprot_H-elongata_contig112596.1026.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length44
Homology
BLAST of mRNA_H-elongata_contig112596.1026.1 vs. uniprot
Match: D8LGF1_ECTSI (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGF1_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 3.570e-18
Identity = 41/44 (93.18%), Postives = 43/44 (97.73%), Query Frame = 0
Query:    1 MAMRANSLTTENKRRTLQRNDIAMAVSKTDTYDFLIDIVPRDEV 44
            MAMRANSLT ENKRRTLQRNDIAMAVSKTDTYDFLIDIVPR+E+
Sbjct:   97 MAMRANSLTAENKRRTLQRNDIAMAVSKTDTYDFLIDIVPREEL 140          
BLAST of mRNA_H-elongata_contig112596.1026.1 vs. uniprot
Match: A0A6H5KYW5_9PHAE (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYW5_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 2.990e-17
Identity = 41/44 (93.18%), Postives = 43/44 (97.73%), Query Frame = 0
Query:    1 MAMRANSLTTENKRRTLQRNDIAMAVSKTDTYDFLIDIVPRDEV 44
            MAMRANSLT ENKRRTLQRNDIAMAVSKTDTYDFLIDIVPR+E+
Sbjct:   97 MAMRANSLTAENKRRTLQRNDIAMAVSKTDTYDFLIDIVPREEL 140          
BLAST of mRNA_H-elongata_contig112596.1026.1 vs. uniprot
Match: A0A397EC51_9STRA (Histone domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EC51_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 8.130e-13
Identity = 31/44 (70.45%), Postives = 40/44 (90.91%), Query Frame = 0
Query:    1 MAMRANSLTTENKRRTLQRNDIAMAVSKTDTYDFLIDIVPRDEV 44
            +++RA   T ENKRRTLQRNDIAMA++KTDT+DFLIDIVPR+++
Sbjct:   21 LSLRAWIHTEENKRRTLQRNDIAMAITKTDTFDFLIDIVPREDI 64          
BLAST of mRNA_H-elongata_contig112596.1026.1 vs. uniprot
Match: A0A397CEM9_9STRA (Histone domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CEM9_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 9.450e-13
Identity = 31/44 (70.45%), Postives = 40/44 (90.91%), Query Frame = 0
Query:    1 MAMRANSLTTENKRRTLQRNDIAMAVSKTDTYDFLIDIVPRDEV 44
            +++RA   T ENKRRTLQRNDIAMA++KTDT+DFLIDIVPR+++
Sbjct:   21 LSLRAWIHTEENKRRTLQRNDIAMAITKTDTFDFLIDIVPREDI 64          
BLAST of mRNA_H-elongata_contig112596.1026.1 vs. uniprot
Match: A0A3R7HMG3_9STRA (CBFD_NFYB_HMF domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HMG3_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 2.800e-12
Identity = 31/44 (70.45%), Postives = 39/44 (88.64%), Query Frame = 0
Query:    1 MAMRANSLTTENKRRTLQRNDIAMAVSKTDTYDFLIDIVPRDEV 44
            +++RA   T ENKRRTLQRNDIAMA++KTD +DFLIDIVPRD++
Sbjct:   29 LSLRAWIHTEENKRRTLQRNDIAMAITKTDVFDFLIDIVPRDDI 72          
BLAST of mRNA_H-elongata_contig112596.1026.1 vs. uniprot
Match: A0A397DGS3_9STRA (Histone domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DGS3_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 3.470e-12
Identity = 31/44 (70.45%), Postives = 40/44 (90.91%), Query Frame = 0
Query:    1 MAMRANSLTTENKRRTLQRNDIAMAVSKTDTYDFLIDIVPRDEV 44
            +++RA   T ENKRRTLQRNDIAMA++KTDT+DFLIDIVPR+++
Sbjct:   21 LSLRAWIHTEENKRRTLQRNDIAMAITKTDTFDFLIDIVPREDI 64          
BLAST of mRNA_H-elongata_contig112596.1026.1 vs. uniprot
Match: A0A0L0FZ65_9EUKA (CBFD_NFYB_HMF domain-containing protein n=2 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FZ65_9EUKA)

HSP 1 Score: 65.5 bits (158), Expect = 5.660e-12
Identity = 32/44 (72.73%), Postives = 38/44 (86.36%), Query Frame = 0
Query:    1 MAMRANSLTTENKRRTLQRNDIAMAVSKTDTYDFLIDIVPRDEV 44
            + MR+   T ENKRRTLQRNDIAMAVS+ DT+DFLIDIVPRD++
Sbjct:   73 LGMRSWGHTEENKRRTLQRNDIAMAVSRNDTFDFLIDIVPRDDI 116          
BLAST of mRNA_H-elongata_contig112596.1026.1 vs. uniprot
Match: A0A3F2RPL4_9STRA (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RPL4_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 6.960e-12
Identity = 31/44 (70.45%), Postives = 39/44 (88.64%), Query Frame = 0
Query:    1 MAMRANSLTTENKRRTLQRNDIAMAVSKTDTYDFLIDIVPRDEV 44
            +++RA   T ENKRRTLQRNDIAMA++KTD +DFLIDIVPRD++
Sbjct:   97 LSLRAWIHTEENKRRTLQRNDIAMAITKTDVFDFLIDIVPRDDI 140          
BLAST of mRNA_H-elongata_contig112596.1026.1 vs. uniprot
Match: A0A662XQJ6_9STRA (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XQJ6_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 7.970e-12
Identity = 31/44 (70.45%), Postives = 39/44 (88.64%), Query Frame = 0
Query:    1 MAMRANSLTTENKRRTLQRNDIAMAVSKTDTYDFLIDIVPRDEV 44
            +++RA   T ENKRRTLQRNDIAMA++KTD +DFLIDIVPRD++
Sbjct:   95 LSLRAWIHTEENKRRTLQRNDIAMAITKTDVFDFLIDIVPRDDI 138          
BLAST of mRNA_H-elongata_contig112596.1026.1 vs. uniprot
Match: A0A0P1ARG4_PLAHL (Nuclear transcription factor y subunit c-1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ARG4_PLAHL)

HSP 1 Score: 64.7 bits (156), Expect = 1.260e-11
Identity = 31/44 (70.45%), Postives = 39/44 (88.64%), Query Frame = 0
Query:    1 MAMRANSLTTENKRRTLQRNDIAMAVSKTDTYDFLIDIVPRDEV 44
            +++RA   T ENKRRTLQRNDIAMA++KTD +DFLIDIVPRD++
Sbjct:   29 LSLRAWIHTEENKRRTLQRNDIAMAITKTDVFDFLIDIVPRDDI 72          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig112596.1026.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGF1_ECTSI3.570e-1893.18CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KYW5_9PHAE2.990e-1793.18CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ec... [more]
A0A397EC51_9STRA8.130e-1370.45Histone domain-containing protein n=1 Tax=Aphanomy... [more]
A0A397CEM9_9STRA9.450e-1370.45Histone domain-containing protein n=2 Tax=Aphanomy... [more]
A0A3R7HMG3_9STRA2.800e-1270.45CBFD_NFYB_HMF domain-containing protein n=2 Tax=Ph... [more]
A0A397DGS3_9STRA3.470e-1270.45Histone domain-containing protein n=1 Tax=Aphanomy... [more]
A0A0L0FZ65_9EUKA5.660e-1272.73CBFD_NFYB_HMF domain-containing protein n=2 Tax=Sp... [more]
A0A3F2RPL4_9STRA6.960e-1270.45CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ph... [more]
A0A662XQJ6_9STRA7.970e-1270.45CBFD_NFYB_HMF domain-containing protein n=1 Tax=No... [more]
A0A0P1ARG4_PLAHL1.260e-1170.45Nuclear transcription factor y subunit c-1 n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009072Histone-foldGENE3D1.10.20.10coord: 1..41
e-value: 1.7E-13
score: 52.7
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 2..41
IPR027170Transcriptional activator HAP5 subunitPANTHERPTHR10252:SF8NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMAcoord: 1..43
NoneNo IPR availablePANTHERPTHR10252HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATEDcoord: 1..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig112596contigH-elongata_contig112596:632..763 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig112596.1026.1mRNA_H-elongata_contig112596.1026.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig112596 617..763 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig112596.1026.1 ID=prot_H-elongata_contig112596.1026.1|Name=mRNA_H-elongata_contig112596.1026.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=44bp
MAMRANSLTTENKRRTLQRNDIAMAVSKTDTYDFLIDIVPRDEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009072Histone-fold
IPR027170HAP5_su