prot_H-elongata_contig11241.1010.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11241.1010.1
Unique Nameprot_H-elongata_contig11241.1010.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length362
Homology
BLAST of mRNA_H-elongata_contig11241.1010.1 vs. uniprot
Match: A0A6H5KJA8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA8_9PHAE)

HSP 1 Score: 280 bits (715), Expect = 6.980e-90
Identity = 147/262 (56.11%), Postives = 171/262 (65.27%), Query Frame = 0
Query:  135 SNLGGLFRRPGVVYPIHPTGHMRLPRPSSRRKFGSNAAE-----------------------------------DGRRRVVRFVVQGKLESIRRDYRALFSCLEDMCLSGREEFKIDAVGSSGSVQNELDSHPCTNARYKEGRDLRYPDFYTVISAGHFVVTATAGHDYEFDRATSSVPTALLLERPLVMSSTLLAAYPCLRNSRIHSMVANDNLCLNLQSAYDLTEAEYDEMELEARDCKLQMWRQTRETVAEMVSGWVLD 361
            S  G LFRRPGVVYPIHPTGH+RLPRP  +R F                                           R   V FVVQG ++S RR+Y  L  CLE MC +GR+ +++ AVG+ G + +++    C   R  E R L YP+FY  ISA HFVVTA AGHDYE+D+ATS+VPTALLLERPLV+SSTLL AYPCLR SR+HSMVAND+LCLNLQ+AYDLT  EYDEMELEARDCKL+MWR  RETVA M SGW LD
Sbjct:    6 STFGALFRRPGVVYPIHPTGHLRLPRP--KRPFAGQQQRWRRHLSGREXXXXXXXXXXXXXXXXXXXXXXXXXXXXREEDVVFVVQGNMQSHRRNYPELTRCLEAMCSTGRDNYQLVAVGARGDLPDDVRRMQCVEQRTTEWRHLEYPEFYANISAAHFVVTAAAGHDYEYDKATSTVPTALLLERPLVISSTLLDAYPCLRKSRVHSMVANDDLCLNLQTAYDLTTEEYDEMELEARDCKLEMWRHARETVAGMASGWTLD 265          
BLAST of mRNA_H-elongata_contig11241.1010.1 vs. uniprot
Match: D8LSI3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSI3_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 3.450e-75
Identity = 115/174 (66.09%), Postives = 138/174 (79.31%), Query Frame = 0
Query:  188 LESIRRDYRALFSCLEDMCLSGREEFKIDAVGSSGSVQNELDSHPCTNARYKEGRDLRYPDFYTVISAGHFVVTATAGHDYEFDRATSSVPTALLLERPLVMSSTLLAAYPCLRNSRIHSMVANDNLCLNLQSAYDLTEAEYDEMELEARDCKLQMWRQTRETVAEMVSGWVLD 361
            ++S RR+Y  L  CLE MC +GR+ +++ AVG+ G + +++ +  C   R  E R L YP+FY  ISAGHFVVTA AGH YE+D+ATS+VPTALLLERPLVMSSTLL AYPCLR SR+HSMVAND+LC+NLQ+AYDLT  EYDEMELEARDCKL+MWR  RETVA M SGW LD
Sbjct:    1 MQSHRRNYPELTRCLEAMCSTGRDNYQLVAVGARGDLPDDVSAMQCVEQRTTEWRHLEYPEFYANISAGHFVVTAAAGHGYEYDKATSTVPTALLLERPLVMSSTLLDAYPCLRKSRVHSMVANDDLCVNLQTAYDLTREEYDEMELEARDCKLEMWRHARETVAGMASGWTLD 174          
BLAST of mRNA_H-elongata_contig11241.1010.1 vs. uniprot
Match: D8LSI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSI2_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 3.330e-29
Identity = 79/187 (42.25%), Postives = 94/187 (50.27%), Query Frame = 0
Query:   16 FDVSVLCTVFKDLEVLFNNRHPMDPRLVDALLWNTKVTIWNVHSVTRAL-ANGVVPTEAQAFARKTPSAD-----GRIPPPTFLTVFGEHVETWERWLEQAYEGWEERPESKSRVETAP----------------------------------EQYHRG-SNLGGLFRRPGVVYPIHPTGHMRLPRP 161
            FD+SVLCT   D+  L    +P+DPRL DALLW+  V+IWNVHSV  A  ++  +P     FAR  PS+      GR PP TFLT++GE    WERW E+AYEGW                                                +   RG S  G LFRRPGVVYPIHPTGH+RLPRP
Sbjct:  535 FDLSVLCTAVNDVNHLLKATYPVDPRLADALLWDVDVSIWNVHSVEGAFRSDHRMPPAVDDFARGVPSSSERGGGGRTPPLTFLTLYGE----WERWSEEAYEGWGXXXXXXXXXXXXXXXXXXXXXXXXGQGAEGXXXXXXXXXXXXXAGYLDDMERGNSTFGALFRRPGVVYPIHPTGHLRLPRP 717          
BLAST of mRNA_H-elongata_contig11241.1010.1 vs. uniprot
Match: A0A482SI13_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SI13_9ARCH)

HSP 1 Score: 72.4 bits (176), Expect = 1.240e-11
Identity = 41/100 (41.00%), Postives = 59/100 (59.00%), Query Frame = 0
Query:  242 RDLRYPDFYTVISAGHFVVT-ATAGHDYEFDRATSSVPTALLLERPLVMSSTLLAAYPCLRNSRIHSMVANDNLCLNLQSAYDLTEAEYDEMELEARDCK 340
            R + +P FY  I+   F+VT A   ++Y   RA+SS+PTA++ E PLV+++ LL  Y CL    IH  VA+ + C  L++A  LT+ E   M  E R CK
Sbjct:   15 RAVAHPYFYGAIARADFLVTFANPAYEYNITRASSSIPTAVMTEVPLVLTTDLLNKYDCLYGGSIHRRVADTDDCKALKNAIQLTDQERKTMREEIRRCK 114          
BLAST of mRNA_H-elongata_contig11241.1010.1 vs. uniprot
Match: A0A482SHX3_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SHX3_9ARCH)

HSP 1 Score: 70.9 bits (172), Expect = 7.800e-10
Identity = 47/184 (25.54%), Postives = 92/184 (50.00%), Query Frame = 0
Query:  180 VRFVVQGKLE-SIRRDYRALFSCLEDMCLSGREEFKIDAVGSSGSVQNELD-----SHPCTNARYKEGRDLRYPDFYTVISAGHFVVTATAGHDYEFDRATSSVPTALLLERPLVMSSTLLAAYPCLRNSRIHSMVANDNLCLNLQSAYDLTEAEYDEMELEARDCKLQMWRQTRETVAEMVSG 357
             RF++QG L    RRD+  LF+C+ +  +  R + ++  +G   ++   L      S+  T  ++ +     Y  F+  +S+  + +  +    YE  R TSS+PT+L+   P+++ + LL+ Y CLRN  +H   +  + C ++++   L      +M  E   C  Q+  ++R T+ ++V G
Sbjct:  212 TRFILQGILTPGKRRDFNRLFACMIE--IKRRHDIELVLIGKVATLGANLTIPLKLSNITTVVKWPD-----YLGFFRNVSSADYAILFSKFDFYEHGRITSSIPTSLVSNLPIILPNKLLSDYACLRNQYVHRATSMADDCSSVKAVLSLRHERQQQMRNEVAFCVKQLLIESRATLHDIVFG 388          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11241.1010.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KJA8_9PHAE6.980e-9056.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSI3_ECTSI3.450e-7566.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LSI2_ECTSI3.330e-2942.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A482SI13_9ARCH1.240e-1141.00Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A482SHX3_9ARCH7.800e-1025.54Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 315..342

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11241contigH-elongata_contig11241:2712..6455 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11241.1010.1mRNA_H-elongata_contig11241.1010.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11241 237..7510 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11241.1010.1 ID=prot_H-elongata_contig11241.1010.1|Name=mRNA_H-elongata_contig11241.1010.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=362bp
MTLEATHALGEGVQIFDVSVLCTVFKDLEVLFNNRHPMDPRLVDALLWNT
KVTIWNVHSVTRALANGVVPTEAQAFARKTPSADGRIPPPTFLTVFGEHV
ETWERWLEQAYEGWEERPESKSRVETAPEQYHRGSNLGGLFRRPGVVYPI
HPTGHMRLPRPSSRRKFGSNAAEDGRRRVVRFVVQGKLESIRRDYRALFS
CLEDMCLSGREEFKIDAVGSSGSVQNELDSHPCTNARYKEGRDLRYPDFY
TVISAGHFVVTATAGHDYEFDRATSSVPTALLLERPLVMSSTLLAAYPCL
RNSRIHSMVANDNLCLNLQSAYDLTEAEYDEMELEARDCKLQMWRQTRET
VAEMVSGWVLD*
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