prot_H-elongata_contig11223.995.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11223.995.1
Unique Nameprot_H-elongata_contig11223.995.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length138
Homology
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BLAST of mRNA_H-elongata_contig11223.995.1 vs. uniprot
Match: A0A6H5KVU5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU5_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 3.050e-36
Identity = 75/131 (57.25%), Postives = 89/131 (67.94%), Query Frame = 0 
Query:    9 EQETKETAMRDMPSPPGYRRMKIPDKSFTRSIVYDHGVRFEQDTANPDIKKQLWFCACSKSCRESSAKGRGGISCQALQTGNVTRHLK-IHGIESDKTKKAKPTKATHGAKVSEAKKTVMDSKDLGRLMML 138
            E +TK TAMRDMP+P GYRR  +P  S TRSIV+DHGV FEQD A PD KK+ W+C  S  CRE S  G+  I+CQ   TGN TRHL+  HGI S KT  AK T+ T  A VS+ K+ VM S D GR+M+L
Sbjct:   41 EADTKATAMRDMPTPVGYRRSTLPPPSGTRSIVFDHGVSFEQDCARPDPKKKRWYCMGSDRCRELSMAGKTWINCQEKGTGNATRHLRDAHGIVSKKTDTAKKTRGTRTANVSKHKEAVMKSSDPGRVMLL 171
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11223.995.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KVU5_9PHAE3.050e-3657.25Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11223contigH-elongata_contig11223:6143..8251 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11223.995.1mRNA_H-elongata_contig11223.995.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11223 6142..8251 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11223.995.1 ID=prot_H-elongata_contig11223.995.1|Name=mRNA_H-elongata_contig11223.995.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=138bp
EEQGQSIPEQETKETAMRDMPSPPGYRRMKIPDKSFTRSIVYDHGVRFEQ
DTANPDIKKQLWFCACSKSCRESSAKGRGGISCQALQTGNVTRHLKIHGI
ESDKTKKAKPTKATHGAKVSEAKKTVMDSKDLGRLMML
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