prot_H-elongata_contig11213.987.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11213.987.1
Unique Nameprot_H-elongata_contig11213.987.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length448
Homology
BLAST of mRNA_H-elongata_contig11213.987.1 vs. uniprot
Match: D7FYZ4_ECTSI (Mago-bind domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYZ4_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 1.610e-56
Identity = 175/462 (37.88%), Postives = 221/462 (47.84%), Query Frame = 0
Query:    1 MIPATQRPDGSWRKARRIRQGFNTNSGGAPRYVPPPYRNTSDIGECGEVTHDIGGQKTRSLTEVASS--RQGVGRAELPAALFLRTMSAKFTTLSLRPSSDREYRRSTSAERVIPTSTVMACARSAMSAAQEQLGCDGCRPLSPEISAENSNTNATFQHLGANDGTRNWWARLRKVERGSI----------GASTVR--------EEGLWFGIELSLRWSDVDCTDGQAAIFNFMRSLVVLDEEEGEEKEDDGSTATAGLQRDTAKLDEGKGRAFAWHGEEE-------RHAKETHKEAAAWDNDGDVRDTVGGRRRKDVGGFKEKYMMESDPAEAEATTGVDDVAAVILLFGGELSKRDRAELHSQAETAAGIASSSHGVGDSRFLALRCDRGGISSTPAGA-ELDLSREQAELALRLFRLAQQEYHSRYERLSHREIREIVSLGGPHAEDHPDLFRLLER 434
            MIPATQRPDG+WRKAR+IR GFN+ SGGA RYVPP +R  +  G+ G          TRSL E+ +   R+G  R  L AALFL T ++    LS R         + +          +A  R    +  ++ G       S E   ++    A  + +G +D   +WW RLR  +R S            A+T +        E+G W G+EL LR SDV   +GQAAI +F++  V             G  A  G  R+ A       R  +   E E                                                              V   +L+FG ELSKRDRA LHSQAE A G+A+SSHGVG+ RFLAL C  GG     AGA EL+LS E+AELA  LFRLAQQEYHSR+E LSHREIRE+V+ GGP AE HPDLF+LLE+
Sbjct:    1 MIPATQRPDGTWRKARKIRTGFNSRSGGATRYVPPAFRTPTGGGDGGGPAAG----HTRSLGEINADEGRRGTPRF-LGAALFLLTAASGSPELSPRQPGGLGDAEAAADPAAAGGGGDVASGRDKSRSGADRTG------GSTESGNDDRRQEAGSRDIGMSDD--DWWTRLRLSQRSSRLARESSESEDPATTTKKEKGKPTGEDGAWVGLELRLRPSDVSYDEGQAAIVDFLKGRV-------------GDQAVPGEGREGAPQPAEDSRGPSARAEVEPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVLVAVLVFGAELSKRDRAGLHSQAEKAGGVANSSHGVGEGRFLALACRLGGN----AGAVELELSPEKAELARSLFRLAQQEYHSRFECLSHREIREVVAEGGPTAEAHPDLFKLLEK 432          
BLAST of mRNA_H-elongata_contig11213.987.1 vs. uniprot
Match: A0A6H5K144_9PHAE (Mago-bind domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K144_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 1.040e-55
Identity = 193/540 (35.74%), Postives = 244/540 (45.19%), Query Frame = 0
Query:    1 MIPATQRPDGSWRKARRIRQGFNTNSGGAPRYVPPPYRNTSDIGECGEVTHDIGGQKTRSLTEVASSRQGVGRAELP----AALFLRTM---SAKFTTLSLRPSSDREYRRS----TSAERVIPTSTVMACARSAMSAAQEQLGCDGCRPLSPE---------------------------ISAENSNTNATFQHLGAND----------GTRN-------WWARLRKVERGSIGA-------------------STVREEGLWFGIELSLRWSDVDCTDGQAAIFNFMRSLVVLDEEEGEEKEDDGSTATAGLQRDTAKLDEGKGRAFAWHGEEERHAKETHKEAAAWDNDGDVRDTVGGRRRKDVGGFKEKYMMESD---------------------PAEAEATTG----------VDDVAAVILLFGGELSKRDRAELHSQAETAAGIASSSHGVGDSRFLALRCDRGGISSTPAGA-ELDLSREQAELALRLFRLAQQEYHSRYERLSHREIREIVSLGGPHAEDHPDLFRLLER 434
            MIPA+QRPDG+WRKAR+IR GF++ SGGA RYVPP +R  +  G+ G   H   G  TRSL E+ +   G GR   P    AALFL T    SA+   +      + E   S    T   RV   S  +   RSA  AAQE L C+  R LSP                             S  + + +   +  G+N+          G+R+       WW RLR  +R S  A                     + E+G W G+EL LR SDV   +GQAAI +F++  V             G  A  G  R+ A       R  +   E E         AAA    G           +++    E      +                     P + E                 V   +L+FG ELSKRDRA LH QAE A G+ S+SHGVG+ RFLAL C  GG     AGA EL+LS E+AELA  LFRLAQQEYHSR+E LSHREIRE+V+ GGP A+ HPDLF+LLE+
Sbjct:    1 MIPASQRPDGTWRKARKIRAGFSSTSGGATRYVPPAFRTPTGGGDGG---HPAAGH-TRSLGEIDA---GEGRRSTPRFLSAALFLLTAASGSAETRRVGGGQGQEEETGGSGAFETDRRRVAVLSLPL---RSAALAAQEHLECESFRQLSPRQPGGLGDAAAAEATPDPTAAAXXXADVASGRDKSRSGADRTGGSNESGNDDPRQEPGSRDIGMSDDDWWTRLRLFQRSSRLARESSESEDRAXXXXXXXXXKPIGEDGAWVGLELRLRPSDVSHDEGQAAIVDFLKGRV-------------GDQAVPGGGREGAPQPAEDSRGPSARAEVEP----PRAPAAAKSPTGXXXXXXXXXXXRELDSNPEHERRAPEGXXXXXXXXXXXXXXXXXVSLPQQPEXXXXXXXXXXXXXXASTVLVAVLVFGAELSKRDRAGLHGQAEKAGGVTSASHGVGEGRFLALACRLGGR----AGAVELELSPEKAELARSLFRLAQQEYHSRFECLSHREIREVVAEGGPTADAHPDLFKLLEK 509          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11213.987.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYZ4_ECTSI1.610e-5637.88Mago-bind domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K144_9PHAE1.040e-5535.74Mago-bind domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015362WIBG, Mago-bindingSMARTSM01273Mago_bind_2coord: 1..24
e-value: 4.6E-8
score: 42.8
IPR015362WIBG, Mago-bindingPFAMPF09282Mago-bindcoord: 2..22
e-value: 4.9E-11
score: 42.3
IPR036348WIBG, N-terminal domain superfamilySUPERFAMILY101931Pym (Within the bgcn gene intron protein, WIBG), N-terminal domaincoord: 1..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11213contigH-elongata_contig11213:1103..4013 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11213.987.1mRNA_H-elongata_contig11213.987.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11213 1030..4412 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11213.987.1 ID=prot_H-elongata_contig11213.987.1|Name=mRNA_H-elongata_contig11213.987.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=448bp
MIPATQRPDGSWRKARRIRQGFNTNSGGAPRYVPPPYRNTSDIGECGEVT
HDIGGQKTRSLTEVASSRQGVGRAELPAALFLRTMSAKFTTLSLRPSSDR
EYRRSTSAERVIPTSTVMACARSAMSAAQEQLGCDGCRPLSPEISAENSN
TNATFQHLGANDGTRNWWARLRKVERGSIGASTVREEGLWFGIELSLRWS
DVDCTDGQAAIFNFMRSLVVLDEEEGEEKEDDGSTATAGLQRDTAKLDEG
KGRAFAWHGEEERHAKETHKEAAAWDNDGDVRDTVGGRRRKDVGGFKEKY
MMESDPAEAEATTGVDDVAAVILLFGGELSKRDRAELHSQAETAAGIASS
SHGVGDSRFLALRCDRGGISSTPAGAELDLSREQAELALRLFRLAQQEYH
SRYERLSHREIREIVSLGGPHAEDHPDLFRLLERIDVDDTPKRPYRY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015362WIBG_mago-bd
IPR036348WIBG_N_sf