prot_H-elongata_contig112084.982.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig112084.982.1
Unique Nameprot_H-elongata_contig112084.982.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length37
Homology
BLAST of mRNA_H-elongata_contig112084.982.1 vs. uniprot
Match: D7G0S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 3.750e-9
Identity = 23/38 (60.53%), Postives = 27/38 (71.05%), Query Frame = 0
Query:    1 MENNNEECLFDGGDCCLCTCTHGPNHHCGE-NGFTCLD 37
            M+NNNE C +DGGDCC CTC   PN  CG  +GF C+D
Sbjct:  212 MDNNNEACAYDGGDCCECTCEDQPNQECGRWSGFACID 249          
BLAST of mRNA_H-elongata_contig112084.982.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 2.020e-8
Identity = 22/38 (57.89%), Postives = 27/38 (71.05%), Query Frame = 0
Query:    1 MENNNEECLFDGGDCCLCTCTHGPNHHCGE-NGFTCLD 37
            M+NNNE C +DGGDCC CTC   PN+ CG  + F C+D
Sbjct:  226 MDNNNEACAYDGGDCCECTCEDTPNNRCGRWSSFACID 263          
BLAST of mRNA_H-elongata_contig112084.982.1 vs. uniprot
Match: D7G136_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G136_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 7.090e-8
Identity = 21/36 (58.33%), Postives = 26/36 (72.22%), Query Frame = 0
Query:    2 ENNNEECLFDGGDCCLCTCTHGPNHHCGENGFTCLD 37
            +NNNE+CL+DGGDCC CTC     + CG N + CLD
Sbjct:  341 DNNNEDCLWDGGDCCECTCDTTSIYRCGANDYDCLD 376          
BLAST of mRNA_H-elongata_contig112084.982.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 1.620e-6
Identity = 21/35 (60.00%), Postives = 24/35 (68.57%), Query Frame = 0
Query:    3 NNNEECLFDGGDCCLCTCTHGPNHHCGENGFTCLD 37
            NNNEEC +DGGDCC CTC     + CG  GF C+D
Sbjct:  193 NNNEECGYDGGDCCFCTCLD-DFYECGIRGFACID 226          
BLAST of mRNA_H-elongata_contig112084.982.1 vs. uniprot
Match: D8LEP6_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP6_ECTSI)

HSP 1 Score: 47.8 bits (112), Expect = 3.730e-5
Identity = 22/38 (57.89%), Postives = 26/38 (68.42%), Query Frame = 0
Query:    1 MENNNEECLFDGGDCCLCTCTHGPNHHCGEN-GFTCLD 37
            M NN EEC FDGGDCC CTC  G  + CG+  G+ C+D
Sbjct:  105 MGNNIEECGFDGGDCCECTCEDGE-YTCGQYYGYACID 141          
BLAST of mRNA_H-elongata_contig112084.982.1 vs. uniprot
Match: A0A6H5JVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVP4_9PHAE)

HSP 1 Score: 47.0 bits (110), Expect = 6.960e-5
Identity = 21/35 (60.00%), Postives = 23/35 (65.71%), Query Frame = 0
Query:    3 NNNEECLFDGGDCCLCTCTHGPNHHCGENGFTCLD 37
            NNNEEC +DGGDCC CTC  G  + CG   F C D
Sbjct:  327 NNNEECDWDGGDCCACTCVSGY-YTCGYYTFDCED 360          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig112084.982.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G0S4_ECTSI3.750e-960.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JM92_9PHAE2.020e-857.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G136_ECTSI7.090e-858.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JTT4_9PHAE1.620e-660.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEP6_ECTSI3.730e-557.89Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
A0A6H5JVP4_9PHAE6.960e-560.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig112084contigH-elongata_contig112084:322..432 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig112084.982.1mRNA_H-elongata_contig112084.982.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig112084 301..432 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig112084.982.1 ID=prot_H-elongata_contig112084.982.1|Name=mRNA_H-elongata_contig112084.982.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=37bp
MENNNEECLFDGGDCCLCTCTHGPNHHCGENGFTCLD
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