prot_H-elongata_contig111829.963.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig111829.963.1
Unique Nameprot_H-elongata_contig111829.963.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length55
Homology
BLAST of mRNA_H-elongata_contig111829.963.1 vs. uniprot
Match: A0A6H5KU22_9PHAE (UAS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU22_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 2.040e-20
Identity = 38/48 (79.17%), Postives = 44/48 (91.67%), Query Frame = 0
Query:    1 RQAAKQQKKCLLVNVQSDGEFDCHRLNRDVWKDETVENIVECKCIFWQ 48
            RQAAKQQKK LLVN+Q++ EFDCHRLNRDVWKDE ++NI+EC CIFWQ
Sbjct:  215 RQAAKQQKKWLLVNIQTEAEFDCHRLNRDVWKDEMIQNIIECNCIFWQ 262          
BLAST of mRNA_H-elongata_contig111829.963.1 vs. uniprot
Match: D7FS95_ECTSI (UBX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS95_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 2.080e-20
Identity = 39/48 (81.25%), Postives = 44/48 (91.67%), Query Frame = 0
Query:    1 RQAAKQQKKCLLVNVQSDGEFDCHRLNRDVWKDETVENIVECKCIFWQ 48
            RQAAKQQKK LLVN+Q++ EFDCHRLNRDVWKDE V+NI+EC CIFWQ
Sbjct:  215 RQAAKQQKKWLLVNIQTEAEFDCHRLNRDVWKDEMVQNIIECNCIFWQ 262          
BLAST of mRNA_H-elongata_contig111829.963.1 vs. uniprot
Match: A0A835ZJ55_9STRA (UBX domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ55_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.660e-13
Identity = 32/54 (59.26%), Postives = 35/54 (64.81%), Query Frame = 0
Query:    1 RQAAKQQKKCLLVNVQSDGEFDCHRLNRDVWKDETVENIVECKCIFWQASAATP 54
            R  AK Q K LLVN+Q D EF CH LNRD WKDETV+ +V C C FWQ     P
Sbjct:  182 RAEAKAQGKMLLVNIQDDTEFACHMLNRDTWKDETVQEMVTCTCTFWQMLRTAP 235          
BLAST of mRNA_H-elongata_contig111829.963.1 vs. uniprot
Match: A0A7R9WZM8_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WZM8_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 3.510e-12
Identity = 27/49 (55.10%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    1 RQAAKQQKKCLLVNVQSDGEFDCHRLNRDVWKDETVENIVECKCIFWQA 49
            R  A+  K+ LLVN+Q D EF CH LNRDVW+DE VEN++    +FWQ+
Sbjct:   51 RNMARDNKRWLLVNLQRDNEFSCHALNRDVWRDELVENLIREGFVFWQS 99          
BLAST of mRNA_H-elongata_contig111829.963.1 vs. uniprot
Match: A0A1Z5JIC2_FISSO (UBX domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JIC2_FISSO)

HSP 1 Score: 68.2 bits (165), Expect = 5.170e-12
Identity = 31/54 (57.41%), Postives = 36/54 (66.67%), Query Frame = 0
Query:    1 RQAAKQQKKCLLVNVQSDGEFDCHRLNRDVWKDETVENIVECKCIFWQASAATP 54
            R  AK  K+ LLVN+Q D EF CH LNRDVW+DE VEN++    IFWQ    TP
Sbjct:  180 RTMAKDSKRWLLVNIQKDDEFACHALNRDVWRDELVENLIREGFIFWQQRDITP 233          
BLAST of mRNA_H-elongata_contig111829.963.1 vs. uniprot
Match: A0A448ZGM6_9STRA (UBX domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZGM6_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.330e-11
Identity = 29/54 (53.70%), Postives = 37/54 (68.52%), Query Frame = 0
Query:    1 RQAAKQQKKCLLVNVQSDGEFDCHRLNRDVWKDETVENIVECKCIFWQASAATP 54
            R +A+  K+ LLVN+Q D EF CH LNRDVW+DE VEN++    +FWQ    TP
Sbjct:  210 RASARDSKRWLLVNLQRDSEFSCHALNRDVWRDELVENLIGDGFVFWQEFDTTP 263          
BLAST of mRNA_H-elongata_contig111829.963.1 vs. uniprot
Match: A0A1E7FEE8_9STRA (UBX domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEE8_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.330e-11
Identity = 31/53 (58.49%), Postives = 36/53 (67.92%), Query Frame = 0
Query:    1 RQAAKQQKKCLLVNVQSDGEFDCHRLNRDVWKDETVENIVECKCIFWQASAAT 53
            R  AK  K+ LLVN+Q D EF CH LNRDVW+DE VEN++    IFWQ   AT
Sbjct:  196 RAMAKDSKRWLLVNIQRDNEFSCHALNRDVWRDELVENLIGEGFIFWQKFDAT 248          
BLAST of mRNA_H-elongata_contig111829.963.1 vs. uniprot
Match: A0A7S4JAM1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JAM1_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.390e-10
Identity = 27/50 (54.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    1 RQAAKQQKKCLLVNVQSDGEFDCHRLNRDVWKDETVENIVECKCIFWQAS 50
            R  A+  ++ LLVN+Q D +F CH LNRDVW+DE VEN+V    +FWQA+
Sbjct:  104 RNVARDARRWLLVNLQRDSDFACHALNRDVWRDELVENLVREGFVFWQAT 153          
BLAST of mRNA_H-elongata_contig111829.963.1 vs. uniprot
Match: K0RPX8_THAOC (UBX domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RPX8_THAOC)

HSP 1 Score: 63.9 bits (154), Expect = 1.580e-10
Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    1 RQAAKQQKKCLLVNVQSDGEFDCHRLNRDVWKDETVENIVECKCIFWQA 49
            +  AK  ++ LLVN+QSD +F CH LNRDVW+DE VEN+V    I WQA
Sbjct:   78 KNVAKDARRWLLVNIQSDSDFACHALNRDVWRDELVENLVREGFILWQA 126          
BLAST of mRNA_H-elongata_contig111829.963.1 vs. uniprot
Match: A0A7S3L2W8_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L2W8_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.620e-10
Identity = 28/54 (51.85%), Postives = 36/54 (66.67%), Query Frame = 0
Query:    1 RQAAKQQKKCLLVNVQSDGEFDCHRLNRDVWKDETVENIVECKCIFWQASAATP 54
            RQ AK  K+ LLVN+Q D EF  H LNRDVW+++ VEN++    IFWQ    +P
Sbjct:  194 RQVAKDSKRWLLVNIQKDSEFSSHALNRDVWRNDLVENLIREGFIFWQEMDVSP 247          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig111829.963.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KU22_9PHAE2.040e-2079.17UAS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FS95_ECTSI2.080e-2081.25UBX domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZJ55_9STRA1.660e-1359.26UBX domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7R9WZM8_9STRA3.510e-1255.10Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A1Z5JIC2_FISSO5.170e-1257.41UBX domain-containing protein n=2 Tax=Fistulifera ... [more]
A0A448ZGM6_9STRA1.330e-1153.70UBX domain-containing protein n=1 Tax=Pseudo-nitzs... [more]
A0A1E7FEE8_9STRA1.330e-1158.49UBX domain-containing protein n=1 Tax=Fragilariops... [more]
A0A7S4JAM1_9STRA1.390e-1054.00Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
K0RPX8_THAOC1.580e-1057.14UBX domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A7S3L2W8_9STRA1.620e-1051.85Hypothetical protein n=2 Tax=Amphora coffeiformis ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13899Thioredoxin_7coord: 2..50
e-value: 7.9E-11
score: 42.0
NoneNo IPR availableGENE3D3.40.30.10coord: 1..55
e-value: 1.1E-17
score: 66.1
NoneNo IPR availablePANTHERPTHR23322:SF6UBX DOMAIN-CONTAINING PROTEIN 7coord: 1..53
NoneNo IPR availablePANTHERPTHR23322FAS-ASSOCIATED PROTEINcoord: 1..53
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 2..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig111829contigH-elongata_contig111829:871..1035 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig111829.963.1mRNA_H-elongata_contig111829.963.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig111829 870..1035 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig111829.963.1 ID=prot_H-elongata_contig111829.963.1|Name=mRNA_H-elongata_contig111829.963.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=55bp
RQAAKQQKKCLLVNVQSDGEFDCHRLNRDVWKDETVENIVECKCIFWQAS
AATPH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf