prot_H-elongata_contig111816.960.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig111816.960.1
Unique Name	prot_H-elongata_contig111816.960.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	222

Homology

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BLAST of mRNA_H-elongata_contig111816.960.1 vs. uniprot
Match: A0A2H4YKK3_9PHAE (Amine oxidase n=6 Tax=Sargassum TaxID=3015 RepID=A0A2H4YKK3_9PHAE)

HSP 1 Score: 384 bits (986), Expect = 5.450e-129
Identity = 188/220 (85.45%), Postives = 201/220 (91.36%), Query Frame = 0

Query:    1 MVCYGKIIVVACFAENVVSAFVPSSFTVSHGSPRAVSTRRRGRRGVSSMIFDYPAPGVRKDYPRPPLEETSQNQRESAAFSQDFLDMPRPSRPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVAAWQDKDGDWVETGLHIFFGAYPNVNQIFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLT 220
            MV YGK +VV C A N+VSAFVP +F    G+  A S+R RGR G  SMIFDYPAPGVRKDYPRPPLE+TSQNQRE+AAFSQ F++MPRPSRPLKVAVIGAGLAGLSCAKYLSDAGH P+VLEARDVLGGKVAAWQDKDGDW+ETGLHIFFGAYPNVNQ+FTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRF+FPDLLPAPLNGLVAILLNNEMLT
Sbjct:    1 MVYYGKAVVVGCLAGNLVSAFVPITFV---GTGSAGSSRLRGRSGALSMIFDYPAPGVRKDYPRPPLEDTSQNQREAAAFSQTFINMPRPSRPLKVAVIGAGLAGLSCAKYLSDAGHNPVVLEARDVLGGKVAAWQDKDGDWIETGLHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFDFPDLLPAPLNGLVAILLNNEMLT 217

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BLAST of mRNA_H-elongata_contig111816.960.1 vs. uniprot
Match: A0A2H4YKI9_9PHAE (Amine oxidase n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A2H4YKI9_9PHAE)

HSP 1 Score: 374 bits (959), Expect = 6.520e-125
Identity = 182/216 (84.26%), Postives = 194/216 (89.81%), Query Frame = 0

Query:    5 GKIIVVACFAENVVSAFVPSSFTVSHGSPRAVSTRRRGRRGVSSMIFDYPAPGVRKDYPRPPLEETSQNQRESAAFSQDFLDMPRPSRPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVAAWQDKDGDWVETGLHIFFGAYPNVNQIFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLT 220
            G + V    A N+ SAF+PS  TV  G+  ++  R   R GVSSMIFDYPAPGVRKDYPRPPLEETSQNQR+SAAFSQ F+DMPRP RPLKVAVIGAGLAGLSCAKYLSDAGH+P+VLEARDVLGGKVAAWQDKDGDW+ETGLHIFFGAYPNVNQ+FTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLT
Sbjct:    5 GNVFVALALAGNLASAFMPSCVTVFRGAD-SLRARTHSRNGVSSMIFDYPAPGVRKDYPRPPLEETSQNQRDSAAFSQAFVDMPRPDRPLKVAVIGAGLAGLSCAKYLSDAGHEPVVLEARDVLGGKVAAWQDKDGDWIETGLHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLT 219

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BLAST of mRNA_H-elongata_contig111816.960.1 vs. uniprot
Match: A0A2H4YKJ4_SACJA (Amine oxidase n=2 Tax=Laminariales TaxID=2886 RepID=A0A2H4YKJ4_SACJA)

HSP 1 Score: 366 bits (939), Expect = 7.230e-122
Identity = 181/216 (83.80%), Postives = 191/216 (88.43%), Query Frame = 0

Query:    5 GKIIVVACFAENVVSAFVPSSFTVSHGSPRAVSTRRRGRRGVSSMIFDYPAPGVRKDYPRPPLEETSQNQRESAAFSQDFLDMPRPSRPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVAAWQDKDGDWVETGLHIFFGAYPNVNQIFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLT 220
            G   V+   A  +  AFVPSS TV  G+   V   R+ +  V SMIFDYPAPGVRKDYPRPPLEETSQNQR+SAAFSQ F+DMPRP RPLKVAVIGAGLAGLSCAKYLSDAGH+PIVLEARDVLGGKVAAWQDKDGDW+ETGLHIFFGAYPNVNQ+FTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLT
Sbjct:    6 GDAFVLLMLAGKMALAFVPSSLTVFRGTAPLV-VGRQSKTSVPSMIFDYPAPGVRKDYPRPPLEETSQNQRDSAAFSQTFIDMPRPERPLKVAVIGAGLAGLSCAKYLSDAGHEPIVLEARDVLGGKVAAWQDKDGDWIETGLHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLT 220

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BLAST of mRNA_H-elongata_contig111816.960.1 vs. uniprot
Match: D8LPN3_ECTSI (Amine oxidase n=8 Tax=Phaeophyceae TaxID=2870 RepID=D8LPN3_ECTSI)

HSP 1 Score: 355 bits (910), Expect = 1.870e-117
Identity = 178/209 (85.17%), Postives = 185/209 (88.52%), Query Frame = 0

Query:   14 AENVVSAFVPSSFTVSHGSPRAVSTRRRG--RRGVSSMIFDYPAPGVRKDYPRPPLEETSQNQRESAAFSQDFLDMPRPSRPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVAAWQDKDGDWVETGLHIFFGAYPNVNQIFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLT 220
            A   +SAFV    T   G   + S R+    R GVSSMIFD+PAPG RKDYPRPPLEETS+NQRESAAFSQ FLDMPRP RPLKVAVIGAGLAGLSCAKYLSDAGHKP+VLEARDVLGGKVAAWQDKDGDWVETGLHIFFGAYPNVNQ+FTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFP LLPAPLNGLVAILLNNEMLT
Sbjct:   15 AGKTISAFVLPPATSFTGVGLSGSARQSAIRRNGVSSMIFDFPAPGERKDYPRPPLEETSENQRESAAFSQAFLDMPRPERPLKVAVIGAGLAGLSCAKYLSDAGHKPVVLEARDVLGGKVAAWQDKDGDWVETGLHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPALLPAPLNGLVAILLNNEMLT 223

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BLAST of mRNA_H-elongata_contig111816.960.1 vs. uniprot
Match: A0A2H4YKJ3_9PHAE (Amine oxidase n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A2H4YKJ3_9PHAE)

HSP 1 Score: 341 bits (875), Expect = 3.220e-112
Identity = 167/203 (82.27%), Postives = 181/203 (89.16%), Query Frame = 0

Query:   19 SAFVPSSFTVSHGSPRAVSTRRRGRRGVSSMIFDYPAPGVRKDYPRPPLEETSQNQRESAAFSQDFLDMPRPSRPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVAAWQDKDGDWVETGLHIFFGAYPNVNQIFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLTL 221
            + FV SS T+  G+        R R GV+SMIFDYPAPGVRKDYPRPPLEETSQNQR+SAAFS+ FL++PRP RPLKVAVIGAGLAGLSCAKYLSDAGH+P+VLEARDVLGGKV+AWQDKDGDWVETGLHIFFGAYPNVNQ+F EL I DRLQWKSHSMIFAMPGQ+TA+GFQRFSRFEF DLLPAPLNGLVAILLN EMLTL
Sbjct:   20 NGFVSSSTTLRKGTAPP-GAGARSRNGVTSMIFDYPAPGVRKDYPRPPLEETSQNQRDSAAFSRSFLELPRPERPLKVAVIGAGLAGLSCAKYLSDAGHQPLVLEARDVLGGKVSAWQDKDGDWVETGLHIFFGAYPNVNQMFKELDIEDRLQWKSHSMIFAMPGQKTAEGFQRFSRFEFTDLLPAPLNGLVAILLNTEMLTL 221

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BLAST of mRNA_H-elongata_contig111816.960.1 vs. uniprot
Match: A0A2H4YKJ7_9PHAE (Amine oxidase n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A2H4YKJ7_9PHAE)

HSP 1 Score: 328 bits (840), Expect = 6.680e-107
Identity = 160/189 (84.66%), Postives = 170/189 (89.95%), Query Frame = 0

Query:   34 RAVSTRRRGRR--GVSSMIFDYPAPGVRKDYPRPPLEETSQNQRESAAFSQDFLDMPRPSRPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVAAWQDKDGDWVETGLHIFFGAYPNVNQIFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLT 220
            R+   R R RR  GVSSMIFDYP  GVRKDYPRPPLEETSQNQR++A+FSQ   D+PR  RPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKV+AWQDKDGDWVETGLHIFFGAYPNVNQ+F EL I DRLQWKSHSMIFAMPGQQT DGFQRFSRF+FP LLPAPLNGLVAILLNN+ML+
Sbjct:   36 RSAVARTRARRADGVSSMIFDYPPQGVRKDYPRPPLEETSQNQRDAASFSQAIADLPRTERPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVSAWQDKDGDWVETGLHIFFGAYPNVNQMFKELDIEDRLQWKSHSMIFAMPGQQTEDGFQRFSRFDFPALLPAPLNGLVAILLNNDMLS 224

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BLAST of mRNA_H-elongata_contig111816.960.1 vs. uniprot
Match: A0A835Z8Q9_9STRA (15-cis-phytoene desaturase, chloroplastic/chromoplastic n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Q9_9STRA)

HSP 1 Score: 293 bits (751), Expect = 5.300e-94
Identity = 135/169 (79.88%), Postives = 152/169 (89.94%), Query Frame = 0

Query:   52 DYPAPGVRKDYPRPPLEETSQNQRESAAFSQDFLDMPRPSRPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVAAWQDKDGDWVETGLHIFFGAYPNVNQIFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLT 220
            DYPAPGVR+D+PRPPLEETS+NQR SA  S+    +PRP +PLKVA+IGAGLAGLS AKYL+DAGH+P + E+RDVLGGKV+AWQD DGDWVETGLHIFFGAYPNVNQ+F ELGI DRLQWKSHSMIFAMPGQQTA+GFQRFSRFEFP  LPAP+NG+ AIL+NNEMLT
Sbjct:   14 DYPAPGVRRDFPRPPLEETSENQRASAQLSEYIKSLPRPEKPLKVAIIGAGLAGLSTAKYLTDAGHEPTIYESRDVLGGKVSAWQDADGDWVETGLHIFFGAYPNVNQMFKELGIEDRLQWKSHSMIFAMPGQQTAEGFQRFSRFEFPQFLPAPINGIAAILMNNEMLT 182

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BLAST of mRNA_H-elongata_contig111816.960.1 vs. uniprot
Match: W7TCB4_9STRA (Amine oxidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TCB4_9STRA)

HSP 1 Score: 254 bits (649), Expect = 4.010e-78
Identity = 129/210 (61.43%), Postives = 151/210 (71.90%), Query Frame = 0

Query:   12 CFAENVVSAFVPSSFTVSHGSPRAVSTRRRGRRGVSSMIFDYPAPGVRKDYPRPPLEETSQNQRESAAFSQDFLDMPRPSRPLKVAVI-GAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVAAWQDKDGDWVETGLHIFFGAYPNVNQIFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLT 220
            CF+        P S    HG  R  ST R      ++ + DYP PG R+DYPRP LEETS + + +   S++    PRP       VI GAGLAGLS AKYL DAG KPIVLEARDVLGGKV+AWQDKDGDW+ETGLHIFFGAYPN+ ++F EL I +RLQWKSHSMIFAMPG+Q A+G QRFSRF+FP  LPAP NG++AILLN+EMLT
Sbjct:   17 CFSVQAFIPQTPLSELARHGRSRQSSTSRLVP--SANFLVDYPPPGERRDYPRPNLEETSSSFKIAEQLSEEIKKFPRPKEGKPTVVIAGAGLAGLSTAKYLCDAGFKPIVLEARDVLGGKVSAWQDKDGDWIETGLHIFFGAYPNMMRLFKELKIEERLQWKSHSMIFAMPGKQDAEGRQRFSRFDFPSFLPAPFNGILAILLNDEMLT 224

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BLAST of mRNA_H-elongata_contig111816.960.1 vs. uniprot
Match: A0A7S2RK35_9STRA (Amine oxidase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RK35_9STRA)

HSP 1 Score: 241 bits (616), Expect = 5.740e-73
Identity = 116/169 (68.64%), Postives = 141/169 (83.43%), Query Frame = 0

Query:   53 YPAPGVRKDYPRPPLEETSQNQRESAAFSQDFLDMPRPSRPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVAAWQDKDGDWVETGLHIFFGAYPNVNQIFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLTL 221
            +PAPG ++DYPRP LEETS N RE++  S+    MPRP+   +V VIG GLAGLS AK+L DAGH+P+V+EARDVLGGKVAAWQD+DGDW ETGLHIFFGAYPN+ ++F +L I DRLQWKSHSMIFAMPGQ+  +G Q+FSRF+F +L PAPLNG++AIL NN+MLTL
Sbjct:   58 WPAPGEQRDYPRPNLEETSPNFREASEASEAIKQMPRPTEKKRVVVIGGGLAGLSTAKHLVDAGHEPLVIEARDVLGGKVAAWQDEDGDWTETGLHIFFGAYPNMMKLFKDLDIEDRLQWKSHSMIFAMPGQRDDNGDQKFSRFDFEEL-PAPLNGVLAILGNNDMLTL 225

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BLAST of mRNA_H-elongata_contig111816.960.1 vs. uniprot
Match: A0A397YCI1_BRACM (Amino_oxidase domain-containing protein n=1 Tax=Brassica campestris TaxID=3711 RepID=A0A397YCI1_BRACM)

HSP 1 Score: 228 bits (582), Expect = 4.660e-72
Identity = 117/183 (63.93%), Postives = 134/183 (73.22%), Query Frame = 0

Query:   38 TRRRGRRGVSSMIFDYPAPGVRKDYPRPPLEETSQNQRESAAFSQDFLDMPRPSRPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVAAWQDKDGDWVETGLHIFFGAYPNVNQIFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLT 220
            TR R RR    +        V  D PRP LE T  N  E+A+ S  F   PRP++PLKV + GAGLAGLS AKYL+DAGHKP++LEARDVLGGK+AAW+D+DGDW ETGLHIFFGAYPNV  +F ELGI DRLQWK HSMIFAMP +        FSRF+FPD+LPAPLNG+ AIL NNEMLT
Sbjct:   43 TRTRRRRSAGPLQV------VCVDIPRPELENTV-NFLEAASLSASFRSAPRPAKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAYPNVQNLFGELGINDRLQWKEHSMIFAMPSKPG-----EFSRFDFPDVLPAPLNGIWAILRNNEMLT 213

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig111816.960.1 vs. uniprot

BLAST of mRNA_H-elongata_contig111816.960.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2H4YKK3_9PHAE	5.450e-129	85.45	Amine oxidase n=6 Tax=Sargassum TaxID=3015 RepID=A...	[more]
A0A2H4YKI9_9PHAE	6.520e-125	84.26	Amine oxidase n=1 Tax=Desmarestia viridis TaxID=62...	[more]
A0A2H4YKJ4_SACJA	7.230e-122	83.80	Amine oxidase n=2 Tax=Laminariales TaxID=2886 RepI...	[more]
D8LPN3_ECTSI	1.870e-117	85.17	Amine oxidase n=8 Tax=Phaeophyceae TaxID=2870 RepI...	[more]
A0A2H4YKJ3_9PHAE	3.220e-112	82.27	Amine oxidase n=1 Tax=Dictyopteris undulata TaxID=...	[more]
A0A2H4YKJ7_9PHAE	6.680e-107	84.66	Amine oxidase n=1 Tax=Ishige okamurae TaxID=233772...	[more]
A0A835Z8Q9_9STRA	5.300e-94	79.88	15-cis-phytoene desaturase, chloroplastic/chromopl...	[more]
W7TCB4_9STRA	4.010e-78	61.43	Amine oxidase n=2 Tax=Monodopsidaceae TaxID=425072...	[more]
A0A7S2RK35_9STRA	5.740e-73	68.64	Amine oxidase n=1 Tax=Rhizochromulina marina TaxID...	[more]
A0A397YCI1_BRACM	4.660e-72	63.93	Amino_oxidase domain-containing protein n=1 Tax=Br...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002937	Amine oxidase	PFAM	PF01593	Amino_oxidase	coord: 103..211 e-value: 9.4E-24 score: 84.5
IPR036188	FAD/NAD(P)-binding domain superfamily	GENE3D	3.50.50.60		coord: 91..218 e-value: 2.9E-21 score: 78.0
IPR036188	FAD/NAD(P)-binding domain superfamily	SUPERFAMILY	51905	FAD/NAD(P)-binding domain	coord: 91..216
None	No IPR available	PANTHER	PTHR42923:SF4	15-CIS-PHYTOENE DESATURASE, CHLOROPLASTIC/CHROMOPLASTIC	coord: 72..221
None	No IPR available	PANTHER	PTHR42923	FAMILY NOT NAMED	coord: 72..221

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig111816	contig	H-elongata_contig111816:757..1966 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig111816.960.1	mRNA_H-elongata_contig111816.960.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig111816 757..1966 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig111816.960.1 ID=prot_H-elongata_contig111816.960.1|Name=mRNA_H-elongata_contig111816.960.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=222bp
MVCYGKIIVVACFAENVVSAFVPSSFTVSHGSPRAVSTRRRGRRGVSSMI
FDYPAPGVRKDYPRPPLEETSQNQRESAAFSQDFLDMPRPSRPLKVAVIG
AGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVAAWQDKDGDWVETGLHIF
FGAYPNVNQIFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPD
LLPAPLNGLVAILLNNEMLTL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002937	Amino_oxidase
IPR036188	FAD/NAD-bd_sf