prot_H-elongata_contig111409.935.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig111409.935.1
Unique Nameprot_H-elongata_contig111409.935.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length105
Homology
BLAST of mRNA_H-elongata_contig111409.935.1 vs. uniprot
Match: D7FUP3_ECTSI (Proline--tRNA ligase, central part n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUP3_ECTSI)

HSP 1 Score: 200 bits (509), Expect = 2.860e-60
Identity = 91/105 (86.67%), Postives = 100/105 (95.24%), Query Frame = 0
Query:    1 MVIRPWGMAIWDSFREDMDKRIKEHGVENAYFPLLIPQSFLTKEAEHVEGFAKECAVVTHHRLSKGPDGTLIPDPEAKLEEPLVIRPTSETIIWTMFRKWIDSYR 105
            MVIRPWGMAIWD+F++DMDKRIK + V+NAYFPLLIPQSFLTKEAEHV+GFAKECAVVTHHRL K  DGTLIPDPEAKLEEPLV+RPTSET+IWTM+RKWIDSYR
Sbjct:  125 MVIRPWGMAIWDAFKDDMDKRIKTYDVDNAYFPLLIPQSFLTKEAEHVDGFAKECAVVTHHRLCKSDDGTLIPDPEAKLEEPLVVRPTSETVIWTMYRKWIDSYR 229          
BLAST of mRNA_H-elongata_contig111409.935.1 vs. uniprot
Match: A0A7S2GJS1_9STRA (Proline--tRNA ligase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GJS1_9STRA)

HSP 1 Score: 177 bits (449), Expect = 2.820e-51
Identity = 80/106 (75.47%), Postives = 92/106 (86.79%), Query Frame = 0
Query:    1 MVIRPWGMAIWDSFREDMDKRIKEHGVENAYFPLLIPQSFLTKEAEHVEGFAKECAVVTHHRLSKGPDGT-LIPDPEAKLEEPLVIRPTSETIIWTMFRKWIDSYR 105
            MVIRPWGMA+WD  R+D+DKRIK  G +NAYFPL+IP SFL+KEA+HV+GFAKECAV+THHRL   PDG  LIPDP AKLEEPLV+RPTSET+IW MF KWIDS+R
Sbjct:   45 MVIRPWGMALWDLMRDDLDKRIKATGAQNAYFPLMIPTSFLSKEADHVDGFAKECAVITHHRLCANPDGAGLIPDPSAKLEEPLVVRPTSETVIWNMFNKWIDSHR 150          
BLAST of mRNA_H-elongata_contig111409.935.1 vs. uniprot
Match: A0A7S1TD86_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TD86_9RHOD)

HSP 1 Score: 168 bits (425), Expect = 1.370e-50
Identity = 78/105 (74.29%), Postives = 89/105 (84.76%), Query Frame = 0
Query:    1 MVIRPWGMAIWDSFREDMDKRIKEHGVENAYFPLLIPQSFLTKEAEHVEGFAKECAVVTHHRLSKGPDGTLIPDPEAKLEEPLVIRPTSETIIWTMFRKWIDSYR 105
            MVIRP G AIWD+ R ++D+RI+E GV NAYFPL IPQSFL+KEAEHVEGFAKECAVVTHHRL     G+L PDP+AKLEEPL++RPTSET+IW MF KWI SYR
Sbjct:   74 MVIRPHGYAIWDAMRVELDRRIRETGVSNAYFPLFIPQSFLSKEAEHVEGFAKECAVVTHHRLRSDGSGSLEPDPDAKLEEPLIVRPTSETMIWYMFGKWIQSYR 178          
BLAST of mRNA_H-elongata_contig111409.935.1 vs. uniprot
Match: A0A7S3XX04_HETAK (Proline--tRNA ligase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XX04_HETAK)

HSP 1 Score: 177 bits (449), Expect = 2.830e-50
Identity = 83/106 (78.30%), Postives = 93/106 (87.74%), Query Frame = 0
Query:    1 MVIRPWGMAIWDSFREDMDKRIKEHGVENAYFPLLIPQSFLTKEAEHVEGFAKECAVVTHHRLSKGPDGT-LIPDPEAKLEEPLVIRPTSETIIWTMFRKWIDSYR 105
            MVI+PWGMAIWD+ RED+D+ IK   V+NAYFPL IP+SFL+KEAEHVEGFAKECAVVTHHRL   P+G  LIPDP+AKLEEPLV+RPTSETIIW MF KWIDSYR
Sbjct:  192 MVIKPWGMAIWDALREDLDREIKAKEVQNAYFPLFIPRSFLSKEAEHVEGFAKECAVVTHHRLCADPEGGGLIPDPQAKLEEPLVVRPTSETIIWNMFGKWIDSYR 297          
BLAST of mRNA_H-elongata_contig111409.935.1 vs. uniprot
Match: A0A835Z2K2_9STRA (Proline--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2K2_9STRA)

HSP 1 Score: 176 bits (445), Expect = 7.020e-50
Identity = 82/106 (77.36%), Postives = 92/106 (86.79%), Query Frame = 0
Query:    1 MVIRPWGMAIWDSFREDMDKRIKEHGVENAYFPLLIPQSFLTKEAEHVEGFAKECAVVTHHRLSKGPDGT-LIPDPEAKLEEPLVIRPTSETIIWTMFRKWIDSYR 105
            MVIRPWGMA+WD+ R D+D RIK+ GV NAYFPL IP+SFL+KEAEHVEGFAKECAVVTHHRL   P+G  L+PDPEAKLEEPLV+RPTSETIIW MF KWI S+R
Sbjct:  177 MVIRPWGMAVWDALRNDLDARIKDKGVSNAYFPLFIPRSFLSKEAEHVEGFAKECAVVTHHRLCADPNGGGLVPDPEAKLEEPLVVRPTSETIIWHMFGKWISSHR 282          
BLAST of mRNA_H-elongata_contig111409.935.1 vs. uniprot
Match: B8BV30_THAPS (Proline--tRNA ligase (Fragment) n=2 Tax=Thalassiosirales TaxID=33847 RepID=B8BV30_THAPS)

HSP 1 Score: 174 bits (440), Expect = 7.200e-50
Identity = 80/107 (74.77%), Postives = 94/107 (87.85%), Query Frame = 0
Query:    1 MVIRPWGMAIWDSFREDMDKRIKEHGVENAYFPLLIPQSFLTKEAEHVEGFAKECAVVTHHRLSKGP--DGTLIPDPEAKLEEPLVIRPTSETIIWTMFRKWIDSYR 105
            MVI+PWGM+IWD  R D+D RIKEHG ENAYFPLLIP+SFL+KEAEHV+GFAKECAVVTHHRL+  P  +G LI DPEA+LE+PL+IRPTSET+IW MF+KWI S+R
Sbjct:   45 MVIKPWGMSIWDQIRNDLDARIKEHGAENAYFPLLIPKSFLSKEAEHVDGFAKECAVVTHHRLTVDPSGEGGLIADPEAELEDPLIIRPTSETMIWNMFKKWIVSHR 151          
BLAST of mRNA_H-elongata_contig111409.935.1 vs. uniprot
Match: L1JIE1_GUITC (Proline--tRNA ligase (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JIE1_GUITC)

HSP 1 Score: 173 bits (438), Expect = 9.250e-50
Identity = 79/106 (74.53%), Postives = 91/106 (85.85%), Query Frame = 0
Query:    1 MVIRPWGMAIWDSFREDMDKRIKEHGVENAYFPLLIPQSFLTKEAEHVEGFAKECAVVTHHRLSKGPDGT-LIPDPEAKLEEPLVIRPTSETIIWTMFRKWIDSYR 105
            MVIRPWGMA+WD  ++++++RIKE G +NAYFPL IP SFL+KEAEHVEGFAKECAVVTHHRL   P G  L+ DPEAKLEEPL++RPTSETIIW MFRKWI SYR
Sbjct:   37 MVIRPWGMAVWDELKDELNRRIKETGTQNAYFPLFIPMSFLSKEAEHVEGFAKECAVVTHHRLCADPSGKGLMADPEAKLEEPLIVRPTSETIIWDMFRKWISSYR 142          
BLAST of mRNA_H-elongata_contig111409.935.1 vs. uniprot
Match: A0A7S2SII9_9STRA (Proline--tRNA ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SII9_9STRA)

HSP 1 Score: 173 bits (439), Expect = 2.830e-49
Identity = 78/106 (73.58%), Postives = 91/106 (85.85%), Query Frame = 0
Query:    1 MVIRPWGMAIWDSFREDMDKRIKEHGVENAYFPLLIPQSFLTKEAEHVEGFAKECAVVTHHRLSKGPDGT-LIPDPEAKLEEPLVIRPTSETIIWTMFRKWIDSYR 105
            MVI+PWGMAIWD+ R D+D+RI + G  NAYFPL IPQSFL+KEAEHVEGFAKECAVVTHHRL   PDG  LIPDP+A+LEEPL++RPTSET+IW M  KWI+S+R
Sbjct:  120 MVIKPWGMAIWDNLRNDLDRRISDSGASNAYFPLFIPQSFLSKEAEHVEGFAKECAVVTHHRLCASPDGNGLIPDPDAELEEPLIVRPTSETVIWNMLSKWINSHR 225          
BLAST of mRNA_H-elongata_contig111409.935.1 vs. uniprot
Match: A0A7S0XC80_9STRA (Proline--tRNA ligase (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XC80_9STRA)

HSP 1 Score: 170 bits (430), Expect = 9.450e-49
Identity = 78/104 (75.00%), Postives = 87/104 (83.65%), Query Frame = 0
Query:    3 IRPWGMAIWDSFREDMDKRIKEHGVENAYFPLLIPQSFLTKEAEHVEGFAKECAVVTHHRLSKGPDGT-LIPDPEAKLEEPLVIRPTSETIIWTMFRKWIDSYR 105
            I+PWGM IWD  R D+D RI+E G +NAYFPL IP+SFL KEAEHVEGFAKECAVVTHHRL   PDG  LIPDPEA+LEEPL++RPTSET+IW MF KWI SYR
Sbjct:    1 IKPWGMGIWDLLRSDVDNRIRETGTQNAYFPLFIPKSFLAKEAEHVEGFAKECAVVTHHRLCVSPDGKDLIPDPEAELEEPLIVRPTSETLIWNMFGKWISSYR 104          
BLAST of mRNA_H-elongata_contig111409.935.1 vs. uniprot
Match: A0A7S4KUY6_GUITH (Proline--tRNA ligase (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KUY6_GUITH)

HSP 1 Score: 173 bits (438), Expect = 9.630e-49
Identity = 79/106 (74.53%), Postives = 91/106 (85.85%), Query Frame = 0
Query:    1 MVIRPWGMAIWDSFREDMDKRIKEHGVENAYFPLLIPQSFLTKEAEHVEGFAKECAVVTHHRLSKGPDGT-LIPDPEAKLEEPLVIRPTSETIIWTMFRKWIDSYR 105
            MVIRPWGMA+WD  ++++++RIKE G +NAYFPL IP SFL+KEAEHVEGFAKECAVVTHHRL   P G  L+ DPEAKLEEPL++RPTSETIIW MFRKWI SYR
Sbjct:  215 MVIRPWGMAVWDELKDELNRRIKETGTQNAYFPLFIPMSFLSKEAEHVEGFAKECAVVTHHRLCADPSGKGLMADPEAKLEEPLIVRPTSETIIWDMFRKWISSYR 320          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig111409.935.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUP3_ECTSI2.860e-6086.67Proline--tRNA ligase, central part n=1 Tax=Ectocar... [more]
A0A7S2GJS1_9STRA2.820e-5175.47Proline--tRNA ligase n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1TD86_9RHOD1.370e-5074.29Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]
A0A7S3XX04_HETAK2.830e-5078.30Proline--tRNA ligase n=2 Tax=Heterosigma akashiwo ... [more]
A0A835Z2K2_9STRA7.020e-5077.36Proline--tRNA ligase n=1 Tax=Tribonema minus TaxID... [more]
B8BV30_THAPS7.200e-5074.77Proline--tRNA ligase (Fragment) n=2 Tax=Thalassios... [more]
L1JIE1_GUITC9.250e-5074.53Proline--tRNA ligase (Fragment) n=1 Tax=Guillardia... [more]
A0A7S2SII9_9STRA2.830e-4973.58Proline--tRNA ligase n=1 Tax=Rhizochromulina marin... [more]
A0A7S0XC80_9STRA9.450e-4975.00Proline--tRNA ligase (Fragment) n=1 Tax=Chromulina... [more]
A0A7S4KUY6_GUITH9.630e-4974.53Proline--tRNA ligase (Fragment) n=1 Tax=Guillardia... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.930.10coord: 1..105
e-value: 3.7E-25
score: 90.9
NoneNo IPR availablePANTHERPTHR43382FAMILY NOT NAMEDcoord: 1..105
NoneNo IPR availablePANTHERPTHR43382:SF3PROLINE--TRNA LIGASE, CHLOROPLASTIC/MITOCHONDRIALcoord: 1..105
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 2..105
IPR006195Aminoacyl-tRNA synthetase, class IIPROSITEPS50862AA_TRNA_LIGASE_IIcoord: 1..105
score: 9.132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig111409contigH-elongata_contig111409:40..1554 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig111409.935.1mRNA_H-elongata_contig111409.935.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig111409 25..1554 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig111409.935.1 ID=prot_H-elongata_contig111409.935.1|Name=mRNA_H-elongata_contig111409.935.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=105bp
MVIRPWGMAIWDSFREDMDKRIKEHGVENAYFPLLIPQSFLTKEAEHVEG
FAKECAVVTHHRLSKGPDGTLIPDPEAKLEEPLVIRPTSETIIWTMFRKW
IDSYR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006195aa-tRNA-synth_II