prot_H-elongata_contig111178.917.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig111178.917.1
Unique Nameprot_H-elongata_contig111178.917.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length304
Homology
[Close]
BLAST of mRNA_H-elongata_contig111178.917.1 vs. uniprot
Match: D7FH49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH49_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 5.250e-10
Identity = 39/74 (52.70%), Postives = 46/74 (62.16%), Query Frame = 0 
Query:    1 LGAYVNDKQFLFVALVSRSWRIAWGQRPTFTRRVTPHSSASQLVESLKSGLPRER-SICSQAARLGNLRALQFA 73
            L  +V DKQFLF A VSRSWR AWG+R T T  VTPH++  QL  S   GL R+    C   AR GNL  L++A
Sbjct:   29 LAQFVLDKQFLFFAAVSRSWRDAWGERATVTSWVTPHTTPFQLQYSFACGLARDGVDWCLTTARAGNLDLLRWA 102
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig111178.917.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FH49_ECTSI5.250e-1052.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 46..297
e-value: 3.2E-12
score: 47.7
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 142..295
coord: 56..190
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 177..273
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 57..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig111178contigH-elongata_contig111178:963..1874 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig111178.917.1mRNA_H-elongata_contig111178.917.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig111178 963..1874 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig111178.917.1 ID=prot_H-elongata_contig111178.917.1|Name=mRNA_H-elongata_contig111178.917.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=304bp
LGAYVNDKQFLFVALVSRSWRIAWGQRPTFTRRVTPHSSASQLVESLKSG
LPRERSICSQAARLGNLRALQFALENGCPWNESTCAGAAAGGHLEVLQWA
RTEGCPWDSMTCAEAAGGGHLAILQWARANGCDWYDHTCSRAAAGGHLDI
LQWARANGCPWDLKTCSEAARGGHLELLKWARAHDCPWNGETCSRAARNG
HLDVLMWARANGCSWNKWTCSKAAEGGHLRLLRWARLNDCPWDTWTCAEA
AAGGHLDVLLWARANGCPWDGWTYALAKKGGHDHVLEWASCNGCPAGEIF
LRE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf