prot_H-elongata_contig110909.897.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig110909.897.1
Unique Name	prot_H-elongata_contig110909.897.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	104

Homology

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BLAST of mRNA_H-elongata_contig110909.897.1 vs. uniprot
Match: A0A6H5KNR9_9PHAE (GTP cyclohydrolase II n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KNR9_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 5.910e-46
Identity = 82/103 (79.61%), Postives = 90/103 (87.38%), Query Frame = 0

Query:    1 MVPNNEDPKMTAFTVTVDAKVGTSTGISAGDRAITLHALADSKATADDFSRPGHVFPLRYTAGGVLKRAGHTEAAVDLSKLAGLAPVGVLCEITTPDGKNMAR 103
            MV NNEDPKMTAF +TVDAK GTSTGISAGDRA TL ALAD +A   DF+RPGH+FPLRYT GGVL+R GHTEAAVDL+ LAGL+PVGVLCEITT DGK+MAR
Sbjct:  497 MVENNEDPKMTAFAITVDAKFGTSTGISAGDRATTLRALADPEAGPQDFNRPGHIFPLRYTPGGVLERGGHTEAAVDLATLAGLSPVGVLCEITTKDGKDMAR 599

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BLAST of mRNA_H-elongata_contig110909.897.1 vs. uniprot
Match: A0A835ZPV4_9STRA (GTP cyclohydrolase II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPV4_9STRA)

HSP 1 Score: 149 bits (376), Expect = 1.040e-40
Identity = 76/103 (73.79%), Postives = 86/103 (83.50%), Query Frame = 0

Query:    1 MVPNNEDPKMTAFTVTVDAKVGTSTGISAGDRAITLHALADSKATADDFSRPGHVFPLRYTAGGVLKRAGHTEAAVDLSKLAGLAPVGVLCEITTPDGKNMAR 103
            MV  NEDPK TAF VTVDAK GT+TGISA DR+ TL  LA+  ATA DF+RPGH+FPLRY  GGVLKR GHTEAA+DL++LAGL PVGVLCEITT DG++MAR
Sbjct:  356 MVAVNEDPKATAFAVTVDAKHGTTTGISAKDRSNTLMTLANPDATAADFNRPGHIFPLRYCKGGVLKRGGHTEAALDLARLAGLPPVGVLCEITTADGRDMAR 458

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BLAST of mRNA_H-elongata_contig110909.897.1 vs. uniprot
Match: A0A7J7IL11_9RHOD (GTP cyclohydrolase II n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IL11_9RHOD)

HSP 1 Score: 145 bits (367), Expect = 2.100e-40
Identity = 71/103 (68.93%), Postives = 85/103 (82.52%), Query Frame = 0

Query:    1 MVPNNEDPKMTAFTVTVDAKVGTSTGISAGDRAITLHALADSKATADDFSRPGHVFPLRYTAGGVLKRAGHTEAAVDLSKLAGLAPVGVLCEITTPDGKNMAR 103
            MVP+NEDP+ T+FTV+VD K GTSTGISA DR+ T+ ALAD K+TA DF RPGH+FPLRY  GGVLKRAGHTEA++DL ++AGLAPVGVLCE+      +MAR
Sbjct:  198 MVPDNEDPRRTSFTVSVDLKHGTSTGISAADRSATIRALADPKSTAADFRRPGHIFPLRYAKGGVLKRAGHTEASLDLCRIAGLAPVGVLCEVVNDIDGSMAR 300

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BLAST of mRNA_H-elongata_contig110909.897.1 vs. uniprot
Match: M1VFL2_CYAM1 (GTP cyclohydrolase II n=2 Tax=cellular organisms TaxID=131567 RepID=M1VFL2_CYAM1)

HSP 1 Score: 146 bits (368), Expect = 3.110e-39
Identity = 71/103 (68.93%), Postives = 85/103 (82.52%), Query Frame = 0

Query:    1 MVPNNEDPKMTAFTVTVDAKVGTSTGISAGDRAITLHALADSKATADDFSRPGHVFPLRYTAGGVLKRAGHTEAAVDLSKLAGLAPVGVLCEITTPDGKNMAR 103
            MVP+NEDPK T+FTV+VD K G +TGISA DR+ T+ ALA+ ++TADDF RPGH+FPLRY  GGVLKRAGHTEA++DL +LAGLAPVGVLCEI      +MAR
Sbjct:  201 MVPDNEDPKRTSFTVSVDLKHGVTTGISAADRSATIRALANPRSTADDFRRPGHIFPLRYAKGGVLKRAGHTEASLDLCRLAGLAPVGVLCEIVNDSDGSMAR 303

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BLAST of mRNA_H-elongata_contig110909.897.1 vs. uniprot
Match: A0A7S1TFV8_9RHOD (GTP cyclohydrolase II n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TFV8_9RHOD)

HSP 1 Score: 144 bits (362), Expect = 6.120e-39
Identity = 72/103 (69.90%), Postives = 83/103 (80.58%), Query Frame = 0

Query:    1 MVPNNEDPKMTAFTVTVDAKVGTSTGISAGDRAITLHALADSKATADDFSRPGHVFPLRYTAGGVLKRAGHTEAAVDLSKLAGLAPVGVLCEITTPDGKNMAR 103
            MVP NEDPK TAFTVT D + GT+TGISA DR++T+ ALAD  + A+DF RPGH+FPLRY  GGVLKRAGHTEAAVD  ++AGL PVGVLCEI   DG +MAR
Sbjct:   89 MVPQNEDPKGTAFTVTCDYRFGTTTGISAKDRSLTIRALADETSAAEDFHRPGHIFPLRYREGGVLKRAGHTEAAVDFCRIAGLRPVGVLCEIVNDDG-SMAR 190

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BLAST of mRNA_H-elongata_contig110909.897.1 vs. uniprot
Match: A0A8J6CIC4_DIALT (GTP cyclohydrolase II n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CIC4_DIALT)

HSP 1 Score: 144 bits (364), Expect = 1.280e-38
Identity = 73/103 (70.87%), Postives = 83/103 (80.58%), Query Frame = 0

Query:    1 MVPNNEDPKMTAFTVTVDAKVGTSTGISAGDRAITLHALADSKATADDFSRPGHVFPLRYTAGGVLKRAGHTEAAVDLSKLAGLAPVGVLCEITTPDGKNMAR 103
            MV  NEDPKMTAFTV+VDA+ GT+TGISA DRA TL  LA + +TADDF RPGH+FPLR    GVL R GHTEAAVDL +LAGLAP GVLCEI + DG++MAR
Sbjct:  147 MVSTNEDPKMTAFTVSVDARTGTTTGISAADRAETLRQLARASSTADDFQRPGHIFPLRARKHGVLARQGHTEAAVDLCRLAGLAPAGVLCEIVSADGQSMAR 249

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BLAST of mRNA_H-elongata_contig110909.897.1 vs. uniprot
Match: A0A7S3XWG0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWG0_HETAK)

HSP 1 Score: 135 bits (339), Expect = 3.400e-38
Identity = 74/104 (71.15%), Postives = 77/104 (74.04%), Query Frame = 0

Query:    1 MVPNNEDPKMTAFTVTVDAK-VGTSTGISAGDRAITLHALADSKATADDFSRPGHVFPLRYTAGGVLKRAGHTEAAVDLSKLAGLAPVGVLCEITTPDGKNMAR 103
            MV  N+DPK TAF VTVDAK  G STGISAGDRA T  ALA       D SRPGHVFPLR   GGVL+RAGHTEAAVDL +LAGL P GVLCEITT DG  MAR
Sbjct:   39 MVAENQDPKGTAFAVTVDAKGPGISTGISAGDRAATFRALAAPATRPADLSRPGHVFPLRARPGGVLRRAGHTEAAVDLCRLAGLRPAGVLCEITTADGLGMAR 142

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BLAST of mRNA_H-elongata_contig110909.897.1 vs. uniprot
Match: A0A7S0T809_9RHOD (GTP cyclohydrolase II n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T809_9RHOD)

HSP 1 Score: 142 bits (357), Expect = 1.240e-37
Identity = 73/103 (70.87%), Postives = 81/103 (78.64%), Query Frame = 0

Query:    1 MVPNNEDPKMTAFTVTVDAKVGTSTGISAGDRAITLHALADSKATADDFSRPGHVFPLRYTAGGVLKRAGHTEAAVDLSKLAGLAPVGVLCEITTPDGKNMAR 103
            MVP NEDPK TAFTV+VD K  TSTGISA DRA T+ ALAD  + A DFSRPGH+FPLRY  GGVLKRAGHTEAAVD ++LAGLAPVG+L EI      +MAR
Sbjct:  176 MVPENEDPKQTAFTVSVDYKHETSTGISAADRARTIRALADPMSVASDFSRPGHLFPLRYRQGGVLKRAGHTEAAVDFARLAGLAPVGILAEIVNDKDGSMAR 278

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BLAST of mRNA_H-elongata_contig110909.897.1 vs. uniprot
Match: A0A2V3IZJ0_9FLOR (GTP cyclohydrolase II n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZJ0_9FLOR)

HSP 1 Score: 140 bits (353), Expect = 1.330e-37
Identity = 70/103 (67.96%), Postives = 81/103 (78.64%), Query Frame = 0

Query:    1 MVPNNEDPKMTAFTVTVDAKVGTSTGISAGDRAITLHALADSKATADDFSRPGHVFPLRYTAGGVLKRAGHTEAAVDLSKLAGLAPVGVLCEITTPDGKNMAR 103
            MV NN DPK TAFT+T D K+GTSTGISA DRA+TL ALAD  +  DDF RPGH+FPLRY  GGVLKRAGHTEA+VD ++LAG APVGVL E+   +  +MAR
Sbjct:  139 MVHNNTDPKNTAFTITCDLKLGTSTGISAADRAMTLRALADPNSHPDDFHRPGHIFPLRYRQGGVLKRAGHTEASVDFARLAGCAPVGVLSEVVNDNDGSMAR 241

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BLAST of mRNA_H-elongata_contig110909.897.1 vs. uniprot
Match: A0A1W9JD78_9PROT (3,4-dihydroxy-2-butanone 4-phosphate synthase n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A1W9JD78_9PROT)

HSP 1 Score: 134 bits (336), Expect = 4.930e-37
Identity = 72/103 (69.90%), Postives = 79/103 (76.70%), Query Frame = 0

Query:    1 MVPNNEDPKMTAFTVTVDAKVGTSTGISAGDRAITLHALADSKATADDFSRPGHVFPLRYTAGGVLKRAGHTEAAVDLSKLAGLAPVGVLCEITTPDGKNMAR 103
            MV NN +   TAFTV+VD K GT+TGISA DRAITL ALADS A A DF RPGH+FPLR   GGVL+R GHTEAA DL+ LAGL PVGVLCEI   DG +MAR
Sbjct:   78 MVENNTESHRTAFTVSVDYKFGTTTGISAADRAITLRALADSSAQASDFLRPGHIFPLRARLGGVLERPGHTEAAYDLAALAGLNPVGVLCEIVNEDG-SMAR 179

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig110909.897.1 vs. uniprot

BLAST of mRNA_H-elongata_contig110909.897.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KNR9_9PHAE	5.910e-46	79.61	GTP cyclohydrolase II n=2 Tax=Ectocarpus TaxID=287...	[more]
A0A835ZPV4_9STRA	1.040e-40	73.79	GTP cyclohydrolase II n=1 Tax=Tribonema minus TaxI...	[more]
A0A7J7IL11_9RHOD	2.100e-40	68.93	GTP cyclohydrolase II n=1 Tax=Cyanidiococcus yangm...	[more]
M1VFL2_CYAM1	3.110e-39	68.93	GTP cyclohydrolase II n=2 Tax=cellular organisms T...	[more]
A0A7S1TFV8_9RHOD	6.120e-39	69.90	GTP cyclohydrolase II n=1 Tax=Compsopogon caeruleu...	[more]
A0A8J6CIC4_DIALT	1.280e-38	70.87	GTP cyclohydrolase II n=1 Tax=Diacronema lutheri T...	[more]
A0A7S3XWG0_HETAK	3.400e-38	71.15	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7S0T809_9RHOD	1.240e-37	70.87	GTP cyclohydrolase II n=1 Tax=Erythrolobus madagas...	[more]
A0A2V3IZJ0_9FLOR	1.330e-37	67.96	GTP cyclohydrolase II n=1 Tax=Gracilariopsis chord...	[more]
A0A1W9JD78_9PROT	4.930e-37	69.90	3,4-dihydroxy-2-butanone 4-phosphate synthase n=2 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000422	3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB	PFAM	PF00926	DHBP_synthase	coord: 1..103 e-value: 1.3E-42 score: 145.5
None	No IPR available	GENE3D	3.90.870.10		coord: 1..103 e-value: 2.4E-43 score: 149.8
None	No IPR available	PANTHER	PTHR21327	GTP CYCLOHYDROLASE II-RELATED	coord: 1..103
None	No IPR available	PANTHER	PTHR21327:SF18	3,4-DIHYDROXY-2-BUTANONE 4-PHOSPHATE SYNTHASE	coord: 1..103
IPR017945	DHBP synthase RibB-like alpha/beta domain superfamily	SUPERFAMILY	55821	YrdC/RibB	coord: 1..101

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig110909	contig	H-elongata_contig110909:1170..1998 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig110909.897.1	mRNA_H-elongata_contig110909.897.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig110909 1170..2013 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig110909.897.1 ID=prot_H-elongata_contig110909.897.1|Name=mRNA_H-elongata_contig110909.897.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=104bp
MVPNNEDPKMTAFTVTVDAKVGTSTGISAGDRAITLHALADSKATADDFS
RPGHVFPLRYTAGGVLKRAGHTEAAVDLSKLAGLAPVGVLCEITTPDGKN
MAR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000422	DHBP_synthase_RibB
IPR017945	DHBP_synth_RibB-like_a/b_dom