prot_H-elongata_contig11058.876.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig11058.876.1
Unique Name	prot_H-elongata_contig11058.876.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	426

Homology

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BLAST of mRNA_H-elongata_contig11058.876.1 vs. uniprot
Match: D7FIH5_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH5_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 1.120e-48
Identity = 104/238 (43.70%), Postives = 141/238 (59.24%), Query Frame = 0

Query:    1 MIWSYQGENYNDAGAYVY-----GAVARMDGSIVLCGRTFGSFTGDSFSVEYGLTDFLAVAIDEDGNELWRWQDGPGVGMNVFEAAGAFADGSVVLAGYTAGDWSGSNMGGYDFAAVKLDASGEEEWRIQFGTELDDVWKGAAVDADD-SFVLTGYTYGSWVAYQAGSDFDRDFVGISLDAEGNILWEYQAGTTEDESMNDVVIRSDGLILLAGWTDGPFTEPEGSSDTLYDFVAVLL 232
            +IW YQ      AG   Y     GA +R DGSIV+ G T G + G+      G  DF +VA+DEDG+ELWR+QDG    ++      A +DGSVVLAG T GD++G+N G  DFA VKL   G  +W  Q GT  D+ ++G A   D  S V  GYT+G+W A QA  + D D VG+S+D +G +LW YQAGTT  ++   V +  DG  LLAG++ G + +P  ++D+  DF  VL+
Sbjct:  180 VIWRYQ------AGVPSYSVVSRGAASRADGSIVIGGTTDGDWDGELT----GYADFFSVALDEDGSELWRFQDGSLFSISSAWGVAALSDGSVVLAGTTDGDYAGTNAGAQDFAVVKLTEEGVLDWTWQDGTLYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTSYDNFIGVDVGPDGAALLAGFSQGAWEDP--TADSYADFAGVLI 405

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BLAST of mRNA_H-elongata_contig11058.876.1 vs. uniprot
Match: D7FIH4_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH4_ECTSI)

HSP 1 Score: 180 bits (457), Expect = 4.340e-48
Identity = 100/233 (42.92%), Postives = 137/233 (58.80%), Query Frame = 0

Query:    1 MIWSYQGENYNDAGAYVYGAVARMDGSIVLCGRTFGSFTGDSFSVEYGLTDFLAVAIDEDGNELWRWQDGPGVGMNVFEAAGAFADGSVVLAGYTAGDWSGSNMGGYDFAAVKLDASGEEEWRIQFGTELDDVWKGAAVDADD-SFVLTGYTYGSWVAYQAGSDFDRDFVGISLDAEGNILWEYQAGTTEDESMNDVVIRSDGLILLAGWTDGPFTEPEGSSDTLYDFVAVLL 232
            +IW YQ            G+ +R DGSIV+ G T G + G+      G TDF  VA+DEDG+ELWR+QDG  +  +      A +DGSVVLAG T G+++G+N G  DFA VKL   G  +W  Q GT  D+ ++G A   D  S V  GYT+G+W A QA  + D D VG+S+D +G +LW YQAGTT  ++   V +  DG  LLAG++ G + +P  ++D   DF  VL+
Sbjct:  126 VIWQYQA-GVPSQSVVSRGSASRADGSIVIGGVTDGDWDGELT----GFTDFFTVALDEDGSELWRFQDGSLLSSSSAWGVAALSDGSVVLAGTTDGNYAGTNAGAQDFAVVKLTEEGVLDWTWQDGTPYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTNHDNFIGVDVGPDGAALLAGFSAGTWEDP--TADFYADFAGVLI 351

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BLAST of mRNA_H-elongata_contig11058.876.1 vs. uniprot
Match: A0A6H5L7T2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7T2_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 8.210e-47
Identity = 106/238 (44.54%), Postives = 139/238 (58.40%), Query Frame = 0

Query:    1 MIWSYQGENYNDAGAYVY-----GAVARMDGSIVLCGRTFGSFTGDSFSVEYGLTDFLAVAIDEDGNELWRWQDGPGVGMNVFEAAGAFADGSVVLAGYTAGDWSGSNMGGYDFAAVKLDASGEEEWRIQFGTELDDVWKGAAVDADD-SFVLTGYTYGSWVAYQAGSDFDRDFVGISLDAEGNILWEYQAGTTEDESMNDVVIRSDGLILLAGWTDGPFTEPEGSSDTLYDFVAVLL 232
            +IW YQ      AG   Y     GA +R DGSIV+ G T G + G+      G  DF +VA++EDG+ELWR+QDG    ++      A +DGSVVLAG T GD++ +N G  DFA VKL   G  +W  Q GT  DD ++GAA   D  S V  GYTYG+W A QA  + D D VG+S+D +G +LW YQAGTT  E+   V +  DG  LLAG++ G  T  + ++D   DF  VL+
Sbjct:  183 VIWQYQ------AGVPSYSVVSRGAASRADGSIVIGGSTDGDWDGELT----GYADFFSVALNEDGSELWRFQDGSEFSISSAWGVAALSDGSVVLAGVTDGDYAETNAGEQDFALVKLTEEGVLDWTWQDGTPYDDGFEGAATGIDGTSMVFVGYTYGTWAAEQAEDEEDSDAVGMSMDGDGTLLWTYQAGTTGFETFVGVDVSPDGAALLAGYSTG--TWEDSTTDFYADFAGVLI 408

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BLAST of mRNA_H-elongata_contig11058.876.1 vs. uniprot
Match: D7G7A3_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A3_ECTSI)

HSP 1 Score: 154 bits (389), Expect = 5.280e-37
Identity = 92/222 (41.44%), Postives = 117/222 (52.70%), Query Frame = 0

Query:   20 AVARMDGSIVLCGRTFGSFTGDSFSVEYGLTDFLAVAIDEDGNELWRWQDGPG-----VGMNVFEAAGAFADGSVVLAGYTAGDWSGSNMGGYDFAAVKLDASGEEEWRIQFGTELDDVWKGAAVDADDSFVLTGYTYGSWVAYQAGSDFDRDFVGISLDAEGNILWEYQAGTTEDESMNDVVIRSDGLILLAGWTDGPFTEPEGSSDTLYDFVAVLLNATD 236
            AV   DGS+VL G T G ++G +     GL D  AV +DE G  LW+WQ G       VG+    +A + +   VVL G T G W+ SN+GGYDF A KLDA G E W  Q GT+ DD  K  AVD D S  L GYT G W     G   + DF    LDA G + W +Q GT ++E    VV+  DG + LAG++ G F      S+    FV V ++  D
Sbjct:  256 AVVNSDGSVVLAGSTEGDWSGTNA----GLGDLAAVKLDESGAVLWKWQSGTSDDELLVGIT---SANSASGSEVVLVGRTEGSWAASNVGGYDFCAAKLDADGNELWSWQDGTDADDTTKAVAVDGDGSVFLAGYTEGDWNQPNEG---ETDFAVTKLDANGTLAWRWQDGTEDEEFGLMVVVGRDGGVYLAGYSTGAFGGINKGSE---GFVVVKIDGRD 464

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BLAST of mRNA_H-elongata_contig11058.876.1 vs. uniprot
Match: D7G371_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G371_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 1.390e-34
Identity = 72/165 (43.64%), Postives = 99/165 (60.00%), Query Frame = 0

Query:   48 GLTDFLAVAIDEDGNELWRWQDGPGVGMNVFEAAGAFADGSVVLAGYTAGDWSGSNMGGYDFAAVKLDASGEEEWRIQFGTELDDVWKGAAVDADDSFVLTGYTYGSWVAYQAGSDFDRDFVGISLDAEGNILWEYQAGTTEDESMNDVVIRSDGLILLAGWTDG 212
            G TDF A  +D  GN  WRWQ     G+N   +  A A+ S +L G T G+++G++ GG DF AVKLD SG E WR Q GT  DDV +  A   D S VL G+TYGSW +  A   F +DF  + L ++G  +W +Q GTTED+++    I+ DG ++L+G + G
Sbjct:   45 GGTDFAACKLDSSGNVTWRWQATTD-GLNAVSSI-APANDSFILGGRTTGNFNGTSAGGTDFVAVKLDDSGTEVWRWQDGTVQDDVVEAVAHSDDGSAVLAGHTYGSWSSDNADGSFSKDFAAVMLSSDGKEIWRWQDGTTEDDTLEGAAIQEDGSVVLSGNSGG 207

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BLAST of mRNA_H-elongata_contig11058.876.1 vs. uniprot
Match: A0A6H5LJ25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJ25_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 3.570e-33
Identity = 71/163 (43.56%), Postives = 97/163 (59.51%), Query Frame = 0

Query:   50 TDFLAVAIDEDGNELWRWQDGPGVGMNVFEAAGAFADGSVVLAGYTAGDWSGSNMGGYDFAAVKLDASGEEEWRIQFGTELDDVWKGAAVDADDSFVLTGYTYGSWVAYQAGSDFDRDFVGISLDAEGNILWEYQAGTTEDESMNDVVIRSDGLILLAGWTDG 212
            TDF A  +D  GN  WRWQ     G++   +  A A+GS VL G T GD++G++ GG DF AVKLD SG E WR Q GT  DD  +      D S VL G+TYGSW +  A   F +DF  + L ++G  +W +Q GTTED+++    I+ DG ++L+G + G
Sbjct:  173 TDFAACKLDSSGNVTWRWQATTD-GLDAVSSI-APANGSFVLGGRTTGDFNGTSAGGTDFVAVKLDDSGTEVWRWQDGTAEDDFVEAVVHSDDGSAVLAGHTYGSWSSDNADGSFSKDFAAVMLSSDGKEIWRWQDGTTEDDTLEGAAIQGDGSVVLSGNSGG 333

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BLAST of mRNA_H-elongata_contig11058.876.1 vs. uniprot
Match: D8LAU1_ECTSI (PEGA domain family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU1_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 1.820e-29
Identity = 87/238 (36.55%), Postives = 126/238 (52.94%), Query Frame = 0

Query:    1 MIWSYQGENYNDAGAYVYGAVARMDG-SIVLCGRTFGSFTGDSFSVEYGLTDFLAVAID-EDGNELWRWQDGPGVGMNVFEAAGAFADGS-VVLAGYTAGDWSGSNMGGYDFAAVKLDASGEEEWRIQFGTELDDVWKGAAVDADDSFVLTGYTYGSWVAYQAGSDFDRDFVGISLDAEGN-ILWEYQAGTTEDES-MNDVVIRSDGLILLAGWTDGPFTEPEGSSDTLYDFVAVLLN 233
            ++W +Q  + ++    +YGA    +G S+V+ G T G+F+G    V  G  DF+A+ ++  DG+E+WRWQDG     +   A    ADG+  VL G T GDW G N G  DFA V LD  G E WR Q GT   +   G AV  D S +L G         +   D    F  + L A+G  + W +Q G   D S + D+   +DG ++LAG+TDG + +  G++    DF+AV+LN
Sbjct:  117 LLWKWQ--DGSEGFDVIYGATLADEGESVVMAGYTSGNFSG----VNAGSNDFVAIKLNFTDGSEVWRWQDGTDE-WDQIGAVAETADGTGFVLVGSTQGDWDGDNAGNGDFAVVMLDVDGNESWRWQDGTTEQEWLVGVAVQDDGSILLAGQQM------ETTGDESVFFTALKLQADGEEVTWRWQGGNAGDASRLYDMAAGADGKMILAGYTDGSWED--GANLGADDFLAVMLN 339

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BLAST of mRNA_H-elongata_contig11058.876.1 vs. uniprot
Match: A0A6H5KY76_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY76_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 1.010e-21
Identity = 73/204 (35.78%), Postives = 90/204 (44.12%), Query Frame = 0

Query:   63 ELWRWQDGPGVGMNVFEAAGAFADGSVVLAGYTAGDWSGSNMGGYDFAAVKLDASGEEEWRIQFG------------------------------TELDDVWKGAAVDADDSFVLTGYTYGSWVAYQAGSDFDRDFVGISLDAEGNILWEYQAGTTEDESMNDVVIRS-DGLILLAGWTDGPFTEPEGSSDTLYDFVAVLLNAT 235
            ELW WQDG     +VF       +GS VLAG T G W G+N GG D AA+KLDA G E WR Q G                              T  DD+    A+  D S +  G TYGSW      ++ D DF    LD  G  +W YQ GT E++ M    +   D  +++AG T   F+    S     D V V LNAT
Sbjct:    4 ELWVWQDGTSE-TDVFAGGAMGPNGSCVLAGATEGAWDGTNFGGNDMAAIKLDAEGNELWRYQDGSVVLAGHQNLDFYVTXXXXXXXXXXXXXXXTPEDDIPYWMAMAGDGSVICVGQTYGSW---DGDANGDSDFAAFRLDGNGEEIWRYQDGTEEEDLMTAAAMGDGDSSVVMAGQTYVNFSGASNSGSA--DIVVVKLNAT 201

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BLAST of mRNA_H-elongata_contig11058.876.1 vs. uniprot
Match: A0A6C0GQI2_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=Rhodocytophaga rosea TaxID=2704465 RepID=A0A6C0GQI2_9BACT)

HSP 1 Score: 91.3 bits (225), Expect = 5.190e-16
Identity = 58/193 (30.05%), Postives = 94/193 (48.70%), Query Frame = 0

Query:   21 VARMDGSIVLCGRTFGSFTGDSFSVEYGLTDFLAVAIDEDGNELWRWQDGPGVGMNVFEAAGAFADGSVVLAGYTA----GDWSGSNMGGYDFAAVKLDASGEEEWRIQFGTELDDVWKGAAVDADDSFVLTGYTYGSWVAYQAGSDFDR-DFVGISLDAEGNILWEYQAGTTEDESMNDVVIRSDGLILLAG 208
            VA  D   +L G +    +GD      G  D+  V  D  GN++W  + G G G +V  AA    D   +L GY++    GD SG N+G  DF  VK+D+ G   W   +G E  D+ + A    D  ++L G ++      ++ +   + D+  +S+D  GN LW+ + G  E + +++++   DG  LL G
Sbjct:   44 VATRDEGFLLGGISNSIISGDKTQDRRGSFDYWIVKTDSTGNKIWDRRYG-GTGSDVLYAALQTQDEGYLLLGYSSSGKGGDKSGDNIGEEDFWVVKIDSQGNLLWEKTYGGEGGDILRSAIETPDGGYLLAGNSFSDISGDKSENSLGQEDYWVVSIDKNGNKLWDKRYGGNEADFLSNIIYAPDGGFLLVG 235

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BLAST of mRNA_H-elongata_contig11058.876.1 vs. uniprot
Match: D8LRE9_ECTSI (Transmembrane receptor kinase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE9_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 1.070e-15
Identity = 65/210 (30.95%), Postives = 101/210 (48.10%), Query Frame = 0

Query:   30 LCGRTFGSFTGDSFSVEYGLTDFLAVAIDEDGNELWRWQDGPGVGMNVFEAAGAFADGSVVLAGYTAGDWSGSNMGGY-DFAAVKLDASGEEEWRIQFGTELD-DVWKGAAVDADDSFVLTGYTYGSWVAYQAGSDFDRDFVGISLDAEGNILWEYQAGTTEDE-SMNDVVIRSDGLILLAGWTDGPFT-EPEGSSDTLYDFVAVLLNAT 235
            + G+T G F+G    +  G  DF+A+ +D +GNELW WQDG   G +  EAA A  DG                     DFAAVK+DA+G E WR Q G  +  +     AV  D + +LTG + G + A         +   + L  +G  +W ++  ++ D   +  +   S+G +L+ G T+G +  +P   S+   DF+ V+ N T
Sbjct:    1 MAGQTSGDFSG----ISVGSNDFIAIKLDAEGNELWTWQDGTS-GGDFVEAAAATGDGXXXXXXXXXXXXXXXXXXXXXDFAAVKIDANGTEVWRWQGGYAVQYNGMHAVAVQEDGTVLLTGRS-GDYNAVAVSGVGASEIAAVMLGVDGEEVWRWKQASSPDVFQVRGMAAGSNGRMLMVGNTNGSWIGDPNLGSE---DFLLVMFNTT 201

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig11058.876.1 vs. uniprot

BLAST of mRNA_H-elongata_contig11058.876.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FIH5_ECTSI	1.120e-48	43.70	Hemolysin-type calcium-binding region n=1 Tax=Ecto...	[more]
D7FIH4_ECTSI	4.340e-48	42.92	Hemolysin-type calcium-binding region n=1 Tax=Ecto...	[more]
A0A6H5L7T2_9PHAE	8.210e-47	44.54	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G7A3_ECTSI	5.280e-37	41.44	Hemolysin-type calcium-binding region n=1 Tax=Ecto...	[more]
D7G371_ECTSI	1.390e-34	43.64	Hemolysin-type calcium-binding region n=1 Tax=Ecto...	[more]
A0A6H5LJ25_9PHAE	3.570e-33	43.56	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LAU1_ECTSI	1.820e-29	36.55	PEGA domain family protein n=1 Tax=Ectocarpus sili...	[more]
A0A6H5KY76_9PHAE	1.010e-21	35.78	Protein kinase domain-containing protein n=1 Tax=E...	[more]
A0A6C0GQI2_9BACT	5.190e-16	30.05	T9SS type A sorting domain-containing protein n=1 ...	[more]
D8LRE9_ECTSI	1.070e-15	30.95	Transmembrane receptor kinase n=2 Tax=Ectocarpus s...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 1..238 e-value: 2.3E-6 score: 29.1
None	No IPR available	PANTHER	PTHR42754	FAMILY NOT NAMED	coord: 86..233
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 368..425
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..344
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 345..367
None	No IPR available	TMHMM	TMhelix		coord: 345..367
IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily	SUPERFAMILY	50998	Quinoprotein alcohol dehydrogenase-like	coord: 25..212

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig11058	contig	H-elongata_contig11058:915..3568 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig11058.876.1	mRNA_H-elongata_contig11058.876.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig11058 290..3618 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig11058.876.1 ID=prot_H-elongata_contig11058.876.1|Name=mRNA_H-elongata_contig11058.876.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=426bp
MIWSYQGENYNDAGAYVYGAVARMDGSIVLCGRTFGSFTGDSFSVEYGLT
DFLAVAIDEDGNELWRWQDGPGVGMNVFEAAGAFADGSVVLAGYTAGDWS
GSNMGGYDFAAVKLDASGEEEWRIQFGTELDDVWKGAAVDADDSFVLTGY
TYGSWVAYQAGSDFDRDFVGISLDAEGNILWEYQAGTTEDESMNDVVIRS
DGLILLAGWTDGPFTEPEGSSDTLYDFVAVLLNATDSASFISSVTLSPSP
TVEPNPLTTPSPIVEPTPLATTFPTVEPTSQATPSSTVEPTPLATPSPTD
EPTLQPTPSPSPLLLFNPIEKRTPDPGSAPAVSPVSEDSGTSNEVIVGSS
VGVAFLAIVGVGVYCIWRRYGQGDMRATTTVPPALHGTSNKASTVARAAS
DLSHPPLPTYCEPPPYEDPPAYSRS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR011047	Quinoprotein_ADH-like_supfam