prot_H-elongata_contig11051.868.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11051.868.1
Unique Nameprot_H-elongata_contig11051.868.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length895
Homology
BLAST of mRNA_H-elongata_contig11051.868.1 vs. uniprot
Match: A0A6H5KJ25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ25_9PHAE)

HSP 1 Score: 635 bits (1638), Expect = 1.150e-211
Identity = 452/841 (53.75%), Postives = 508/841 (60.40%), Query Frame = 0
Query:    1 MLAVPAVVQSEVFSGFLESRCRRFKEGPAGGSGSKDWGWSSDSRASAKGKNIEHQDNKNNSPYSDGDGGAPRTPETAVDFLLQPFDYAGAYVPRRAEHTERIDVLRGESVVWKFEVLDHLDVDFSVVFRPHPVALPNRI-LEVAASGS---------DGGELSEPIAAAK----------GEAGFEATTRSGKRNGRGRRSGWWGGGSGDDRSGSNTCANSRTAAGAAGAATVDEGRAKAGCGAKVGKVEDGARGSERIRAGKGDEDETVKDQTVHLPTRYSTGGGDLVQGSFTCPADGTCILRWDNTYSRLRGKRLRFVVESATVATMRAAIEAAGAAEHKRRTTRSAAAQAILDSGQGEARVSVTAVGLGGDF--GRETGC-GEDGGDEDIGVNTILSYYYPGRYGFGRVRRIAATVLRDLGTMLDAEETLDGVGGRKNVRLGGGGSGSGAS--------------------VDARGVETLVARFEILEDEVASASARRAQCEAQAKVLLATLQKANTKADRLERALAEAREFLSTTRRNLVEVEATRDEALAEAKRVGSRLQVSEEKLLRSKRELDLLQAERSVWQVARSGIQEELSKVVAELELERHRHEDTSRALAKSHESRAHAETEAARLSRRLEEERGGAGGARAALAAEREASRLAXXXXXDARTAVAELDAXXXELGAQKRVLVAGLRGRERALGDRCAAAEARAEEAGMMRRAAEARVRKLEEEARRREAAQADGEIRLQRLRAEKKVLLAEIRRGAFG-GGGTGSGLSVGGAIGNGEREKEGEAA------EDGLGESGSEGGCESVSGGQRSLLSPRGTRDSAHDRKA 791
            +L VPAV+QS+VFSGFL              SG            SA  +                   A ++PETA+DFLLQPF+Y  AYVPRRAEHTE IDVLRGESVVWKFEVLDHLD+DFSV FRPHP+A  +R  LE    G          D G L   +  A           G A   A   SG      +RS WW       RSG                          GCG   G+   G  G   + A KG        +TVHLPTRYSTGGGD VQGSF+CPA GTCILRWDN +SRLRGKRL FV ES TV TM+AAIEAAGAA+HKRR  RSAAAQ ILDSG+GE +V VTAVG   D+  G E G  G DGG   +   +  + YY   Y FGRVRR+ A +LRDLG M+D   T  G+ G      G GGSGSG+S                    V+A GV  LVA+FE+LEDEVAS SARRAQ EAQAKVLLA LQK+N + DRLER+L E RE LST R  L E E  RDEA A A   G+RLQ SEE+LLR++R+ +LLQAERSVW VARSGIQEEL+KVVAELE ERHRHEDTSRALAKSHE        AARLSRRLEEERGGAGGARAALAAEREASRLA     DARTAVAELDA   ELGAQKRVLVAGLR RERALGDRCA AEARAE                       EAAQADGE+RLQRLRAEKKVLLAE+RRGA G GGG  +G+S GG   +G +E EG  +      +D  G  G+ GG    S  +R  LSPR +  +  D KA
Sbjct:  181 LLTVPAVIQSQVFSGFLAE------------SGGXXXXXXXXGACSASEE-------------------ARKSPETAIDFLLQPFEYGRAYVPRRAEHTESIDVLRGESVVWKFEVLDHLDIDFSVTFRPHPLAASSRRPLEADEDGGRPPTAEEAEDLGVLDTGVGLASSPGPRGVGNGGVAASSANGDSGSTEAGRKRSRWW------SRSG--------------------------GCGGAAGEAV-GGTGVGAVSAPKG--------ETVHLPTRYSTGGGDPVQGSFSCPAAGTCILRWDNAFSRLRGKRLCFVFESVTVQTMQAAIEAAGAADHKRRAARSAAAQTILDSGRGEVKVCVTAVGAADDYSGGEEDGKEGNDGGIYSVSAGSSDAIYYSSLYRFGRVRRVVAGLLRDLGGMVDVTRTSGGIDGAAIAESGRGGSGSGSSGGSAFDVGRGSAGRGDRYGNVNAEGVAKLVAQFELLEDEVASVSARRAQSEAQAKVLLANLQKSNARTDRLERSLEETREDLSTVRETLRETETARDEAAAAATEAGARLQTSEEQLLRARRQHNLLQAERSVWHVARSGIQEELAKVVAELEQERHRHEDTSRALAKSHEXXXXXXXXAARLSRRLEEERGGAGGARAALAAEREASRLAREEAEDARTAVAELDAAVAELGAQKRVLVAGLRARERALGDRCAGAEARAEXXXXXXXXXXXXXXXXXXXXXXXEAAQADGEVRLQRLRAEKKVLLAEVRRGAGGEGGGAAAGVSAGG---DGGKESEGVGSLRGVVGDDARGREGAGGGSGGSS--RRGSLSPRSSGKNVQDNKA 944          
BLAST of mRNA_H-elongata_contig11051.868.1 vs. uniprot
Match: D8LGY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGY0_ECTSI)

HSP 1 Score: 375 bits (963), Expect = 5.360e-116
Identity = 289/627 (46.09%), Postives = 330/627 (52.63%), Query Frame = 0
Query:   11 EVFSGFLESRCRRFKEGPAGGSGSKDWGWSSDSRASAKGKNIEHQDNKNNSPYSDGDGGAPRTPETAVDFLLQPFDYAGAYVPRRAEHTERIDVLRGESVVWKFEVLDHLDVDFSVVFRPHPVALPNRI-LEVAASGS-----------DGGELSEPIAAAK-------GEAGFEATTRSGKRNGR--GR-RSGWWGGGSGDDRSGSNTCANSRTAAGAAGAATVDEGRAKAGCGAKVGKVEDGARGSERIRAGKGDEDETVKDQTVHLPTRYSTGGGDLVQGSFTCPADGTCILRWDNTYSRLRGKRLRFVVESATVATMRAAIEAAGAAEHKRRTTRSAAAQAILDSGQGEARVSVTAVGLGGDFGRETGCGEDGGDEDIGVNTILSYYYPGRYGFGRVRRIAATVLRDLGTMLDAEETLDGVGGRKNVRLGGGGSGSGASVDARGVETLVARFEILEDEVASASARRAQCEAQAKVLLATLQKANTKADRLERALAEAREFLSTTRRNLVEVEATRDEALAEAKRVGSRLQVSEEKLLRSKRELDLLQAERSVWQVARSGIQEELSKVVAELELERHRHEDTSRALAKSHESRAHAETEAARLSRRLEEERGGAGGARAALAAE 615
            EVFSGFLE   RR   G       K+ G    + A + G+                   A ++PETA+DFLLQPF+Y  AYVPRRAEHTE IDVLRGESVVWKFEVLDHLD+DFSV FRPHP+A  +R  LE    G            D G L   +  A        G  G  A++ +G  +G   GR RS WWG      RSG                          GC    G   DG  G   + A KG        +TVHLPTRYSTGGGD VQGSF+CPA GTCILRWDN +SRLRGKRL FV ES TV TM+AAIEAAGAA+HKRR  RSAAAQ ILDSG+GE +V VTAVG   D+         GGDE+                   V+ + A  L                                 ++  R V  L + F  +E                                RLER+L E RE LST R+ L E E  RDEA A A    + LQ SEE+LLR++R+ DLLQAERSVW VARSGIQEEL+KVVAELE ERHRHEDTSRALAKSHE        AARLSRRLEEERGGAGGAR  LA+E
Sbjct:  107 EVFSGFLEEHSRRRHRGANKEDEEKESGGDGSAGACSTGEE------------------ARKSPETAIDFLLQPFEYGRAYVPRRAEHTESIDVLRGESVVWKFEVLDHLDIDFSVTFRPHPLASSSRRPLEADEDGGRPSTAEEQEEEDRGVLDAGVGLASSPGPRGVGNGGVAASSANGDSSGTEAGRKRSRWWG------RSG--------------------------GCEGAAGDA-DGGTGGGAVSAPKG--------ETVHLPTRYSTGGGDPVQGSFSCPAAGTCILRWDNAFSRLRGKRLCFVFESVTVQTMQAAIEAAGAADHKRRAARSAAAQTILDSGRGEVKVCVTAVGAADDY---------GGDEED------------------VKEVGAAFL---------------------------------ALVPRNVMNLPS-FHTVE--------------------------------RLERSLEETREDLSTVRKTLRETETARDEAAAAAAEASAGLQTSEEQLLRARRQHDLLQAERSVWHVARSGIQEELAKVVAELEQERHRHEDTSRALAKSHEXXXXXXXXAARLSRRLEEERGGAGGAREDLASE 581          
BLAST of mRNA_H-elongata_contig11051.868.1 vs. uniprot
Match: A0A835ZFW3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFW3_9STRA)

HSP 1 Score: 219 bits (558), Expect = 6.230e-57
Identity = 228/640 (35.62%), Postives = 287/640 (44.84%), Query Frame = 0
Query:   74 PETAVDFLLQPFDYAGAYVPRRAEHTERIDVLRGESVVWKFEVLDHLDVDFSVVFRPHPVALPNRILEVAASGSDGGELSEPIAAAKGEAGFEATTRSGKRNGRGRRSGWWGGGSGDDRSGSNTCANSRTAAGAAGAATVDEGRAKAGCGAKVGKVEDGARGSERIRAGKGDEDETVKDQTVHLPTRYSTGGGDLVQGSFTCPADGTCILRWDNTYSRLRGKRLRFVVESATVATMRAAIEAAGAAEHKRRTTRSAAAQAILDSGQGEARVSVTAVGLGGDFGRETGC------GEDGGDEDIGVNTILSYYYPGRYGFGRVRRIAATVLR-----DLGT---MLDAEETLDGVGGRKNVRLGGGGSGSGASVDARGVETLVARFEILEDEVASASARRAQCEAQAKVLLATLQKANTKADRLERALAEAREFLSTTRRNLVEVEAT-------RDEALAEAKRVGSRLQVSEEKLLRSKRELDLLQAERSVWQVARSGIQEELSKVVAELELERHRHEDTSRALAKSHESRAHAETEAARLSRRLEEERGGAGGARAALAAEREASRLAXXXXXDARTAVAELDAXXXELGAQKRVLVAGLRGRERALGDRCAAAEARAEEAGMMRRAAEARVRKLEEE 692
            P+TA+ FLLQPF     YVPRR E++  + +L+GESV W+F+V   LD+DF+V F P                                   E   RS   +G GRR   W G       G+  C                                DG  G+ R                VH  TRY   GG  VQGS T  ADG C LRW N +SRLRGKRL FV E+   A MRAA++AA A   K    R  +AQ  +  G   A VSV                        GGD   G  ++    Y           +   VLR      LG                              G S     V TL+  +E LEDE+A  SARRAQ EAQ KVLLA LQ+A  KAD     +A A+E    TR  L E+          R+EAL EA         +EE+LL ++RE +LLQAERSVWQVARSGIQ EL++ V  LE E+H HED   AL +S  +    E E  RL+ R+      A G R A    +E +  A     D R A+AE++A   +L AQKR+LV  LR +++A  D+ +A +A AEEA MM+RAAE R++KLE E
Sbjct:  192 PQTAIGFLLQPFAPHCVYVPRRQEYSRELVILKGESVAWRFDVDCGLDIDFTVEFTP----------------------------------CEVHQRSALVSGEGRRQRGWLGYVSPASEGAGGCTG------------------------------DGVEGAPRS-------------VLVHRRTRYP--GGARVQGSCTSAADGLCALRWGNGHSRLRGKRLYFVAEAVDAAAMRAAVQAADACAFKASAARGGSAQQRITPG---AAVSVXXXXXXXXXXXXXXXXXXXXXSPGGGDPPAGRFSLTRSAY----------NLVWNVLRLSPYYGLGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLSEYEERVATLLVNYERLEDELAGMSARRAQAEAQTKVLLAQLQRA--KAD-----VASAQEGWQGTRAELCEMTRRADDMALEREEALQEAHSAERAQLQAEERLLAARRECELLQAERSVWQVARSGIQSELARAVGALETEKHAHEDARAALKRSQTAVERLEAERQRLAERV-----AAAGDREAQERLKEEAAAARAESEDVRVALAEVEAETAKLSAQKRLLVVELRQQKKAFLDQLSAVQAEAEEARMMQRAAETRLKKLEGE 727          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11051.868.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KJ25_9PHAE1.150e-21153.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGY0_ECTSI5.360e-11646.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZFW3_9STRA6.230e-5735.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 553..573
NoneNo IPR availableCOILSCoilCoilcoord: 521..541
NoneNo IPR availableCOILSCoilCoilcoord: 626..646
NoneNo IPR availableCOILSCoilCoilcoord: 672..699
NoneNo IPR availableCOILSCoilCoilcoord: 793..813
NoneNo IPR availableCOILSCoilCoilcoord: 437..513
NoneNo IPR availableGENE3D2.60.120.680coord: 238..304
e-value: 1.7E-7
score: 33.2
NoneNo IPR availablePANTHERPTHR34491FAMILY NOT NAMEDcoord: 519..844
IPR036598GOLD domain superfamilySUPERFAMILY101576Supernatant protein factor (SPF), C-terminal domaincoord: 90..302

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11051contigH-elongata_contig11051:2214..7048 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11051.868.1mRNA_H-elongata_contig11051.868.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11051 1461..7099 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11051.868.1 ID=prot_H-elongata_contig11051.868.1|Name=mRNA_H-elongata_contig11051.868.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=895bp
MLAVPAVVQSEVFSGFLESRCRRFKEGPAGGSGSKDWGWSSDSRASAKGK
NIEHQDNKNNSPYSDGDGGAPRTPETAVDFLLQPFDYAGAYVPRRAEHTE
RIDVLRGESVVWKFEVLDHLDVDFSVVFRPHPVALPNRILEVAASGSDGG
ELSEPIAAAKGEAGFEATTRSGKRNGRGRRSGWWGGGSGDDRSGSNTCAN
SRTAAGAAGAATVDEGRAKAGCGAKVGKVEDGARGSERIRAGKGDEDETV
KDQTVHLPTRYSTGGGDLVQGSFTCPADGTCILRWDNTYSRLRGKRLRFV
VESATVATMRAAIEAAGAAEHKRRTTRSAAAQAILDSGQGEARVSVTAVG
LGGDFGRETGCGEDGGDEDIGVNTILSYYYPGRYGFGRVRRIAATVLRDL
GTMLDAEETLDGVGGRKNVRLGGGGSGSGASVDARGVETLVARFEILEDE
VASASARRAQCEAQAKVLLATLQKANTKADRLERALAEAREFLSTTRRNL
VEVEATRDEALAEAKRVGSRLQVSEEKLLRSKRELDLLQAERSVWQVARS
GIQEELSKVVAELELERHRHEDTSRALAKSHESRAHAETEAARLSRRLEE
ERGGAGGARAALAAEREASRLAREEAEDARTAVAELDAAVAELGAQKRVL
VAGLRGRERALGDRCAAAEARAEEAGMMRRAAEARVRKLEEEARRREAAQ
ADGEIRLQRLRAEKKVLLAEIRRGAFGGGGTGSGLSVGGAIGNGEREKEG
EAAEDGLGESGSEGGCESVSGGQRSLLSPRGTRDSAHDRKATLKQLSRQL
VHLRERQHHLREDLRSDPTNASAQRLETDVDRAVQNLETRIKRLLSVVSG
EREGEASSASGSSPLSTGAAATKKMNVSPAGTRGAAEEVETYSV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036598GOLD_dom_sf