prot_H-elongata_contig110440.863.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig110440.863.1
Unique Nameprot_H-elongata_contig110440.863.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length98
Homology
BLAST of mRNA_H-elongata_contig110440.863.1 vs. uniprot
Match: D8LS05_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS05_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 5.380e-40
Identity = 64/80 (80.00%), Postives = 70/80 (87.50%), Query Frame = 0
Query:   18 KDGGGEHGLGVVPINYLKDGKDPYIKPDGEYPEWLWKMQVPSLARLRRKKEDDYTLEEFRRFVQLDAREKIKLQNRSSKF 97
            KD  GEHGLGV PIN+LKDGKDP + PD EYPEWLW MQ+PSLARL+R KEDDYTL+EFRRFVQLD+REKIK QNRS KF
Sbjct:   27 KDSAGEHGLGVTPINFLKDGKDPSVMPDEEYPEWLWNMQLPSLARLKRTKEDDYTLDEFRRFVQLDSREKIKRQNRSGKF 106          
BLAST of mRNA_H-elongata_contig110440.863.1 vs. uniprot
Match: A0A6H5JCL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCL9_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 1.040e-38
Identity = 62/76 (81.58%), Postives = 69/76 (90.79%), Query Frame = 0
Query:   22 GEHGLGVVPINYLKDGKDPYIKPDGEYPEWLWKMQVPSLARLRRKKEDDYTLEEFRRFVQLDAREKIKLQNRSSKF 97
            GEHGLGV PIN+LKDGKDP + PD EYPEWLW MQ+PSLARL+RKKE+DYTL+EFRRFVQLD+REKIK QNRS KF
Sbjct:   71 GEHGLGVTPINFLKDGKDPSVMPDEEYPEWLWNMQLPSLARLKRKKEEDYTLDEFRRFVQLDSREKIKRQNRSGKF 146          
BLAST of mRNA_H-elongata_contig110440.863.1 vs. uniprot
Match: A0A5N6P5K2_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6P5K2_9ASTR)

HSP 1 Score: 72.4 bits (176), Expect = 3.640e-14
Identity = 36/67 (53.73%), Postives = 46/67 (68.66%), Query Frame = 0
Query:   28 VVPINYLKDGKDPYIKPDGEYPEWLWKM--QVPSLARLRRKKEDDYTLEEFRRFVQLDAREKIKLQN 92
            VV  N LKDG DP I PD EYPEWLW++  + P+L+ LRRKK +    E+ +RFV+LD R +IK  N
Sbjct:   62 VVGANILKDGTDPKILPDSEYPEWLWRLLDKKPALSELRRKKIETLPYEDLKRFVKLDNRARIKENN 128          
BLAST of mRNA_H-elongata_contig110440.863.1 vs. uniprot
Match: A0A0K9Q6Y4_SPIOL (Uncharacterized protein (Fragment) n=2 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9Q6Y4_SPIOL)

HSP 1 Score: 71.6 bits (174), Expect = 7.610e-14
Identity = 33/67 (49.25%), Postives = 48/67 (71.64%), Query Frame = 0
Query:   28 VVPINYLKDGKDPYIKPDGEYPEWLWKM--QVPSLARLRRKKEDDYTLEEFRRFVQLDAREKIKLQN 92
            VV  N LKDG DP I+PD EYP+WLW++  + P+L+ L+RK+ +D   E+ +R+V+LD R +IK  N
Sbjct:   64 VVGANILKDGTDPKIRPDSEYPDWLWQLLDKRPALSELQRKEAEDLPFEDLKRYVKLDNRARIKENN 130          
BLAST of mRNA_H-elongata_contig110440.863.1 vs. uniprot
Match: A0A2R6RJH1_ACTCC (54S ribosomal protein n=3 Tax=Actinidia TaxID=3624 RepID=A0A2R6RJH1_ACTCC)

HSP 1 Score: 70.9 bits (172), Expect = 1.260e-13
Identity = 38/71 (53.52%), Postives = 48/71 (67.61%), Query Frame = 0
Query:   28 VVPINYLKDGKDPYIKPDGEYPEWLWKM--QVPSLARLRRKKEDDYTLEEFRRFVQLDAREKIKLQNRSSK 96
            VV  N LKDG DP I PD EYP+WLW +  + P+L+ LRRKK +    E+ +RFV+LD R +IK QN S K
Sbjct:   56 VVGANILKDGADPKILPDSEYPDWLWHLLDKHPALSELRRKKIETLLYEDLKRFVKLDNRARIK-QNNSDK 125          
BLAST of mRNA_H-elongata_contig110440.863.1 vs. uniprot
Match: A0A484MBP3_9ASTE (Uncharacterized protein n=4 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484MBP3_9ASTE)

HSP 1 Score: 70.1 bits (170), Expect = 2.830e-13
Identity = 35/67 (52.24%), Postives = 44/67 (65.67%), Query Frame = 0
Query:   28 VVPINYLKDGKDPYIKPDGEYPEWLWKM--QVPSLARLRRKKEDDYTLEEFRRFVQLDAREKIKLQN 92
            VV  N LKDG DP + PD EYPEWLW +  + P+L+ LRRK  +    EE +RFV+LD R +IK  N
Sbjct:   61 VVGANILKDGTDPKVLPDSEYPEWLWHLLDKKPALSELRRKDLESLPYEELKRFVKLDNRARIKENN 127          
BLAST of mRNA_H-elongata_contig110440.863.1 vs. uniprot
Match: A0A6A6MX44_HEVBR (Uncharacterized protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6MX44_HEVBR)

HSP 1 Score: 67.8 bits (164), Expect = 5.840e-13
Identity = 34/67 (50.75%), Postives = 45/67 (67.16%), Query Frame = 0
Query:   28 VVPINYLKDGKDPYIKPDGEYPEWLWKM--QVPSLARLRRKKEDDYTLEEFRRFVQLDAREKIKLQN 92
            VV  N LKDG DP I PD EYP+WLW +  + P+L+ LRR+K +    E+ +RFV+LD R +IK  N
Sbjct:    6 VVGANILKDGADPKILPDSEYPDWLWHLLDKRPALSALRREKIETLPYEDLKRFVKLDNRARIKENN 72          
BLAST of mRNA_H-elongata_contig110440.863.1 vs. uniprot
Match: A0A2P6R5P4_ROSCH (Putative ribosomal protein L37 n=2 Tax=Rosoideae TaxID=171638 RepID=A0A2P6R5P4_ROSCH)

HSP 1 Score: 68.9 bits (167), Expect = 7.120e-13
Identity = 35/67 (52.24%), Postives = 44/67 (65.67%), Query Frame = 0
Query:   28 VVPINYLKDGKDPYIKPDGEYPEWLWKM--QVPSLARLRRKKEDDYTLEEFRRFVQLDAREKIKLQN 92
            VV  N LKDG DP I PD EYPEWLW +  + P+L+ LRRK  +    E+ +RFV+LD R +IK  N
Sbjct:   56 VVGANILKDGTDPKILPDSEYPEWLWHLIDKRPALSELRRKNIETLPYEDLKRFVKLDNRARIKENN 122          
BLAST of mRNA_H-elongata_contig110440.863.1 vs. uniprot
Match: UPI001CB9013D (54S ribosomal protein L37, mitochondrial-like n=2 Tax=Asteroideae TaxID=102804 RepID=UPI001CB9013D)

HSP 1 Score: 68.9 bits (167), Expect = 7.120e-13
Identity = 34/67 (50.75%), Postives = 44/67 (65.67%), Query Frame = 0
Query:   28 VVPINYLKDGKDPYIKPDGEYPEWLWKM--QVPSLARLRRKKEDDYTLEEFRRFVQLDAREKIKLQN 92
            VV  N LKDG DP I PD EYP+WLW +  + P+L+ LRRK  +    E+ +RFV+LD R +IK  N
Sbjct:   56 VVGANILKDGTDPKILPDSEYPDWLWHLLDKKPALSELRRKNIESLPYEDLKRFVKLDNRSRIKENN 122          
BLAST of mRNA_H-elongata_contig110440.863.1 vs. uniprot
Match: A0A4S8JHU9_MUSBA (Uncharacterized protein n=3 Tax=Musa TaxID=4640 RepID=A0A4S8JHU9_MUSBA)

HSP 1 Score: 68.9 bits (167), Expect = 7.460e-13
Identity = 33/67 (49.25%), Postives = 45/67 (67.16%), Query Frame = 0
Query:   28 VVPINYLKDGKDPYIKPDGEYPEWLWKM--QVPSLARLRRKKEDDYTLEEFRRFVQLDAREKIKLQN 92
            VV  N LKDG DP I PD EYP+WLW++  + P+L+ LRRK  +    E+ +RFV+LD R +I+  N
Sbjct:   58 VVGANILKDGTDPKIMPDSEYPDWLWRLLDKRPTLSELRRKDSESLPFEDLKRFVKLDNRARIEGNN 124          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig110440.863.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS05_ECTSI5.380e-4080.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCL9_9PHAE1.040e-3881.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5N6P5K2_9ASTR3.640e-1453.73Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
A0A0K9Q6Y4_SPIOL7.610e-1449.25Uncharacterized protein (Fragment) n=2 Tax=Spinaci... [more]
A0A2R6RJH1_ACTCC1.260e-1353.5254S ribosomal protein n=3 Tax=Actinidia TaxID=3624... [more]
A0A484MBP3_9ASTE2.830e-1352.24Uncharacterized protein n=4 Tax=Cuscuta sect. Clei... [more]
A0A6A6MX44_HEVBR5.840e-1350.75Uncharacterized protein n=1 Tax=Hevea brasiliensis... [more]
A0A2P6R5P4_ROSCH7.120e-1352.24Putative ribosomal protein L37 n=2 Tax=Rosoideae T... [more]
UPI001CB9013D7.120e-1350.7554S ribosomal protein L37, mitochondrial-like n=2 ... [more]
A0A4S8JHU9_MUSBA7.460e-1349.25Uncharacterized protein n=3 Tax=Musa TaxID=4640 Re... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013870Ribosomal protein L37, mitochondrialPFAMPF08561Ribosomal_L37coord: 30..55
e-value: 1.7E-8
score: 35.0
IPR013870Ribosomal protein L37, mitochondrialPANTHERPTHR28595FAMILY NOT NAMEDcoord: 28..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig110440contigH-elongata_contig110440:680..1408 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig110440.863.1mRNA_H-elongata_contig110440.863.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig110440 625..1874 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig110440.863.1 ID=prot_H-elongata_contig110440.863.1|Name=mRNA_H-elongata_contig110440.863.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=98bp
MTAKGKGGGVCGVGTEVKDGGGEHGLGVVPINYLKDGKDPYIKPDGEYPE
WLWKMQVPSLARLRRKKEDDYTLEEFRRFVQLDAREKIKLQNRSSKF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013870Ribosomal_L37_mit