prot_H-elongata_contig11023.837.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11023.837.1
Unique Nameprot_H-elongata_contig11023.837.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length521
Homology
BLAST of mRNA_H-elongata_contig11023.837.1 vs. uniprot
Match: D8LP18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP18_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 3.100e-42
Identity = 182/542 (33.58%), Postives = 254/542 (46.86%), Query Frame = 0
Query:   43 VLVSQLSLVDDLLGRELEKVSEDNMVVLVESAEEALDAGGRMLDTLRLVSSTSRRLADARAAMAAGDPLLKSSEGVIRLVAAAVISMGKAQREGITKDASAA------DPSRLLEAGARWERAAKAADSDVAAAEEEVERLAGEXXXXXXXXXXXXXXXXXXXERRLREEHNQRTERATRALGKEIDERRQMEARIFAMELRRKEMAAQVRNKRARERLYSWFKTRRPSI------KDSRA---------IPDRWKMKEGPEVKLSDAG------LVGNTAASAGAPAVPAT------------HNEGTAAGALPTLT----------------------DRWNLDDGISDLAQRGLKIVGAGFYTTTAATAAXXEAAAATNGNESVGRR--KRSRHIWTHEEEVE-WLDVVAKRIRSTIVGEVPAGNWAMEVDDDGD-DAMAL------GGTEGMDEAEGNASEGDERACFSIRDVASRRHAGAAPVTFKVEEERPDTDTPSLDVENSSRGEEATEGASGAGKTEAELRKRLLAAM-GRSK 512
            +L +Q+ +V+ +L R+LE +SE +++++ ESAEEAL     +L++L+LV++   RLAD RAA+A GDPLL+SSEG++RL+AAAV+S  +AQREG+ K  +AA        +   E   RW RAA +ADSDVAAA  EVER++GE                XXX                                I AMELRR EMA QVRNK AR+RL   F+ ++ +       KDS A         + DRW ++EG  V+++D G      L      +A APA                +N+     A  +                        DRW ++DG +DLA+RG+++ G G               +   G    GRR  KR+R     +EE E WL++V+KR+RST+VG  P G W    ++DG+ DA+A+      G    +       SEG           A+R  +GA   T  V            +V              G G  EAELR+RLLAAM GRSK
Sbjct:  643 LLAAQVEVVETVLSRDLEGLSEGDLLLMWESAEEALGVADGLLESLKLVNAARHRLADTRAAVANGDPLLRSSEGIMRLIAAAVMSTARAQREGVVKHPTAAATAGRHSVTSPAETADRWRRAAISADSDVAAAMREVERVSGELRDKHRREEEEKSWRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILAMELRRNEMAEQVRNKAARKRLQEQFRAQQAARDAAGRKKDSGASKKHAESPSMADRWTLEEG-LVQVADGGNHNSGTLTLTHGIAAAAPAXXXXXXXXXXXKSQGGNNKSERDSAKVSQAEASXXXXXXXXXXAVVPRDPADDRWGMNDGAADLAERGVELEGGGAGLYLPPPLDWPPDVSLLPGGAKGGRRGRKRNRQARAEKEEAEQWLEMVSKRVRSTVVGAAPPGTWGAANEEDGNGDAVAMDVVVDGGSLNAVGAVRVGGSEGG----------ANRAPSGAGSATGAV-----------ANV--------------GGGDVEAELRQRLLAAMIGRSK 1148          
BLAST of mRNA_H-elongata_contig11023.837.1 vs. uniprot
Match: A0A6H5JML1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML1_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 6.240e-10
Identity = 63/189 (33.33%), Postives = 85/189 (44.97%), Query Frame = 0
Query:  322 DRWNLDDGISDLAQRGLKIVGAGFYTTTAATAAXXEAAAATNGNESVGRRK--RSRHIWTHEEEVEWLDVVAKRIRSTIVGEVPAGNWAMEVDDDGDDAMALGGTEGMDEAEGNASEGDERACFSIRDVASRRHAGAAPVTFKVEEERPDTDTPSLDVENSSRGEEATEGASGAGKTEAELRKRLLAAM 508
            DRW ++DG +DLA+RG+++ G G              A+        GRR   R R     +EEVEWL++V+KR+RS +VG  P G+W    +DDG+     G    MD   G    G   A  ++R   S   A  AP                     +  G     G+ G G  EAELR+RLLAAM
Sbjct:  136 DRWGMNDGAADLAERGVELEGGGAGLYLPPPPDWPPDASLLPDGAKGGRRXXXRDRQASAEKEEVEWLEMVSKRVRSKVVGAAPPGSWGAANEDDGN-----GNAVPMDVVVGG---GSLNADGAVRVGGSEGGANRAP---------------------NGAGSATGAGSVGGGDVEAELRQRLLAAM 295          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11023.837.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LP18_ECTSI3.100e-4233.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JML1_9PHAE6.240e-1033.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 160..217
NoneNo IPR availableCOILSCoilCoilcoord: 234..254

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11023contigH-elongata_contig11023:1940..6949 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11023.837.1mRNA_H-elongata_contig11023.837.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11023 1610..8286 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11023.837.1 ID=prot_H-elongata_contig11023.837.1|Name=mRNA_H-elongata_contig11023.837.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=521bp
MGNANASKPSLLSYGDEGAGASAGCSESGNCPDETYGSHGRCVLVSQLSL
VDDLLGRELEKVSEDNMVVLVESAEEALDAGGRMLDTLRLVSSTSRRLAD
ARAAMAAGDPLLKSSEGVIRLVAAAVISMGKAQREGITKDASAADPSRLL
EAGARWERAAKAADSDVAAAEEEVERLAGEIVERRQNEDKERAQREAEEE
RRLREEHNQRTERATRALGKEIDERRQMEARIFAMELRRKEMAAQVRNKR
ARERLYSWFKTRRPSIKDSRAIPDRWKMKEGPEVKLSDAGLVGNTAASAG
APAVPATHNEGTAAGALPTLTDRWNLDDGISDLAQRGLKIVGAGFYTTTA
ATAATAEAAAATNGNESVGRRKRSRHIWTHEEEVEWLDVVAKRIRSTIVG
EVPAGNWAMEVDDDGDDAMALGGTEGMDEAEGNASEGDERACFSIRDVAS
RRHAGAAPVTFKVEEERPDTDTPSLDVENSSRGEEATEGASGAGKTEAEL
RKRLLAAMGRSKRSGTADCS*
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