prot_H-elongata_contig110021.818.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig110021.818.1
Unique Nameprot_H-elongata_contig110021.818.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length325
Homology
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BLAST of mRNA_H-elongata_contig110021.818.1 vs. uniprot
Match: D7FWM9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWM9_ECTSI)

HSP 1 Score: 283 bits (724), Expect = 2.250e-86
Identity = 178/334 (53.29%), Postives = 217/334 (64.97%), Query Frame = 0 
Query:    1 MAKSRKKQCRKPKQPTKGGGLVVVSSRDLHAMLSDPSD-QAKWGVNKRSKLKKRKQGGLIRDLSPLGVGPDEDFDDVPSVSPFTASDASVLNECDIQHLSFTSTHPREQRLYYLLATQP---------QPNFKGSGGSKPRETR--EGGCHAVVFVEETALAQRLLGELKALSLIAFAVHERTPKAQRQDHVKRFRSSPSAKKSSVLILTNAAAAR-PLLIGSIPISEAKLVRVVHFDAPEGKKNAAARRRIAAGVFGARGAGTAEEVHLEGGEDADGLRSFTFESGAMNGISSRLAVAKKLARLVASATVADGQEKGMRRAAAAAGLEWDDAS 321
            MAKS KKQCR PK   KGGGLVVVS R+LH+  +     QAK G        KR  G  + DLS  G G D D  D P  +   AS   V      +++  +  H RE     LL T+          Q +  G GG  P      EGGCHA+VFVE TA+AQ L+GELKALSL+AFAVH+RTPKAQ Q+HVKRF ++ S+++SSVL+LTN A +R P  IGS+     KL RVVHFDAPEGKK+AAAR R+A G F  RGAG AEEV+L GG +A GL  F+F+SGAM GI SRLAVAKKL+R +A  +  +G+E+GM+RAAAAAGLEWD+ S
Sbjct:    1 MAKSSKKQCRTPKPSRKGGGLVVVSQRNLHSNSTPQQHPQAKKGXXXXXXXXKRGLG--LADLSAPGDGDDSDDFDAPPSASAVASTGGVA-----EYIFSSKHHSREXXXXXLLTTRTSDMCATRGQQQHQPGEGGGIPDAPTAVEGGCHALVFVETTAVAQELVGELKALSLVAFAVHDRTPKAQTQEHVKRFLAATSSERSSVLVLTNLAISRTPPSIGSVKPGHGKLQRVVHFDAPEGKKDAAARARVAGGFFRGRGAGAAEEVYLRGGAEAVGLAPFSFDSGAMGGIRSRLAVAKKLSRAIAL-SAGEGEERGMQRAAAAAGLEWDEQS 326
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig110021.818.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWM9_ECTSI2.250e-8653.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 89..246
e-value: 1.9E-7
score: 32.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 98..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig110021contigH-elongata_contig110021:436..2025 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig110021.818.1mRNA_H-elongata_contig110021.818.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig110021 436..2025 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig110021.818.1 ID=prot_H-elongata_contig110021.818.1|Name=mRNA_H-elongata_contig110021.818.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=325bp
MAKSRKKQCRKPKQPTKGGGLVVVSSRDLHAMLSDPSDQAKWGVNKRSKL
KKRKQGGLIRDLSPLGVGPDEDFDDVPSVSPFTASDASVLNECDIQHLSF
TSTHPREQRLYYLLATQPQPNFKGSGGSKPRETREGGCHAVVFVEETALA
QRLLGELKALSLIAFAVHERTPKAQRQDHVKRFRSSPSAKKSSVLILTNA
AAARPLLIGSIPISEAKLVRVVHFDAPEGKKNAAARRRIAAGVFGARGAG
TAEEVHLEGGEDADGLRSFTFESGAMNGISSRLAVAKKLARLVASATVAD
GQEKGMRRAAAAAGLEWDDASGHR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase