prot_H-elongata_contig110006.816.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig110006.816.1 vs. uniprot
Match: A0A2K3LCP3_TRIPR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3LCP3_TRIPR) HSP 1 Score: 56.6 bits (135), Expect = 9.950e-8 Identity = 31/100 (31.00%), Postives = 54/100 (54.00%), Query Frame = 0
Query: 2 QVSESWIFDSGSSGHVTPDASYMRNFKSCNKF-LRVASGTLLPIEGHGDLTIDFRSGTGTVRIELEDVAYVPRLTYHLLSLPTFAKKGNYYVGDKNGTRL 100
+ SE W DSG S H+TP ++ +F + K +++A L EG ++ I ++G ++ +EDV YVP++ Y+L+S+ +KG + N L
Sbjct: 44 EKSEEWFLDSGCSNHMTPHREWLTSFDASRKTSIKLADSRKLAAEGTYNIVIRGKTGN---KVIVEDVFYVPKMNYNLMSIGQLVEKGFSVTIEGNSLNL 140
BLAST of mRNA_H-elongata_contig110006.816.1 vs. uniprot
Match: A0A6P4Q2V2_GOSAR (uncharacterized protein LOC108485355 n=1 Tax=Gossypium arboreum TaxID=29729 RepID=A0A6P4Q2V2_GOSAR) HSP 1 Score: 55.1 bits (131), Expect = 1.290e-6 Identity = 29/88 (32.95%), Postives = 49/88 (55.68%), Query Frame = 0
Query: 2 QVSESWIFDSGSSGHVTPDASYMRNF-KSCNKFLRVASGTLLPIEGHGDLTIDFRSGTGTVRIELEDVAYVPRLTYHLLSLPTFAKKG 88
+V + W+FDSG + H++PDA+ + +SC +++ G + EG GD+ I SG + +V +VP + +LLS+ KKG
Sbjct: 186 KVKKGWLFDSGCTNHMSPDATIFKTLDRSCKTRVKIGDGHCIQAEGIGDVIICTPSGNKLI----PNVLFVPEIDRNLLSIAQLLKKG 269
BLAST of mRNA_H-elongata_contig110006.816.1 vs. uniprot
Match: A0A225VJ98_9STRA (CCHC-type domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VJ98_9STRA) HSP 1 Score: 52.4 bits (124), Expect = 1.340e-5 Identity = 24/81 (29.63%), Postives = 46/81 (56.79%), Query Frame = 0
Query: 1 GQVSESWIFDSGSSGHVTPDASYMRNFKSCNKFLRVASGTLLPIEGHGDLTIDFRSGTGTVRIELEDVAYVPRLTYHLLSL 81
G+++ +WI DSGSS H+ D +++ N ++CN +G L + G +T+ +G +EL +V Y + ++L+S+
Sbjct: 253 GELTGTWILDSGSSRHLVSDMTWLENAETCNDRCTQPNGEPLAVTMKGSVTLKVSAGGAEQTVELTNVYYAENVVHNLISM 333
BLAST of mRNA_H-elongata_contig110006.816.1 vs. uniprot
Match: A0A4Y1ZP29_ARAVE (gag_pre-integrs domain-containing protein (Fragment) n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y1ZP29_ARAVE) HSP 1 Score: 50.1 bits (118), Expect = 9.240e-5 Identity = 29/104 (27.88%), Postives = 50/104 (48.08%), Query Frame = 0
Query: 7 WIFDSGSSGHVTPDASYMRNFKSCN--KFLRVASGTLLPIEGHGDLTIDFRSGTGTVRIELEDVAYVPRLTYHLLSLPTFAKKGNYYVGDKNGTRLCFPSGKKV 108
WIFD+ ++ H + D M N++ + G P+EG G++ ++F I L +V Y P+L +L+S K G+ +V +KN + G K+
Sbjct: 280 WIFDTAATSHFSCDKDSMLNYRPVKGAEVSVAIGGVTCPVEGTGEVELEFYKNGECETITLLNVLYSPKLKQNLISGSKIDKAGHNFVCNKNILNVYHKDGHKL 383
BLAST of mRNA_H-elongata_contig110006.816.1 vs. uniprot
Match: A0A4Y2NTP2_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=9 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2NTP2_ARAVE) HSP 1 Score: 50.1 bits (118), Expect = 9.750e-5 Identity = 29/104 (27.88%), Postives = 50/104 (48.08%), Query Frame = 0
Query: 7 WIFDSGSSGHVTPDASYMRNFKSCN--KFLRVASGTLLPIEGHGDLTIDFRSGTGTVRIELEDVAYVPRLTYHLLSLPTFAKKGNYYVGDKNGTRLCFPSGKKV 108
WIFD+ ++ H + D M N++ + G P+EG G++ ++F I L +V Y P+L +L+S K G+ +V +KN + G K+
Sbjct: 280 WIFDTAATSHFSCDKDSMLNYRPVKGAEVSVAIGGVTCPVEGTGEVELEFYKNGECETITLLNVLYSPKLKQNLISGSKIDKAGHNFVCNKNILNVYHKDGHKL 383 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig110006.816.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig110006.816.1 ID=prot_H-elongata_contig110006.816.1|Name=mRNA_H-elongata_contig110006.816.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=108bpback to top |