prot_H-elongata_contig109974.809.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig109974.809.1
Unique Nameprot_H-elongata_contig109974.809.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length88
Homology
BLAST of mRNA_H-elongata_contig109974.809.1 vs. uniprot
Match: D8LBK9_ECTSI (OmpA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK9_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 2.980e-24
Identity = 56/86 (65.12%), Postives = 63/86 (73.26%), Query Frame = 0
Query:    3 QKALVSWSPVADDGGSELTKYVVVASTAYADINVEAIATVLPESDGGEPPTEGTVSGLTNGLVYSFQVVAANAFGHSPRSLPSDKV 88
            ++A+V WS  ADDGG +LTKYVV+ASTAYADINVEA                 TV GLTNGLVYSFQVVAANAFG+S RSLPS+KV
Sbjct: 1773 KQAIVQWSAAADDGGGDLTKYVVIASTAYADINVEA-----------------TVEGLTNGLVYSFQVVAANAFGYSTRSLPSNKV 1841          
BLAST of mRNA_H-elongata_contig109974.809.1 vs. uniprot
Match: A0A6H5K857_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K857_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 1.080e-8
Identity = 28/37 (75.68%), Postives = 32/37 (86.49%), Query Frame = 0
Query:    3 QKALVSWSPVADDGGSELTKYVVVASTAYADINVEAI 39
            ++A V WS  ADDGG +LTKYVV+ASTAYADINVEAI
Sbjct: 1567 KQAFVQWSAAADDGGGDLTKYVVIASTAYADINVEAI 1603          
BLAST of mRNA_H-elongata_contig109974.809.1 vs. uniprot
Match: A0A535MTZ7_9CHLR (Mannan endo-1,4-beta-mannosidase n=2 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535MTZ7_9CHLR)

HSP 1 Score: 57.0 bits (136), Expect = 1.760e-7
Identity = 34/85 (40.00%), Postives = 45/85 (52.94%), Query Frame = 0
Query:    2 DQKALVSWSPVADDGGSELTKYVVVASTAYADINVEAIATVLPESDGGEPPTEGTVSGLTNGLVYSFQVVAANAFGHSPRSLPSD 86
            D  A VSW P A DGG+ +T Y V+A    A ++V +  T              T+SGLTNG+ Y+F V A+N  G S  SL S+
Sbjct:  646 DGSASVSWLPPAYDGGAPVTSYSVIAQPGTASVSVPSSMTTA------------TISGLTNGVTYTFTVTASNTEGTSDPSLVSN 718          
BLAST of mRNA_H-elongata_contig109974.809.1 vs. uniprot
Match: A0A3C1E2K8_9MICO (Uncharacterized protein (Fragment) n=1 Tax=Microbacteriaceae bacterium TaxID=1873462 RepID=A0A3C1E2K8_9MICO)

HSP 1 Score: 56.6 bits (135), Expect = 2.200e-7
Identity = 34/83 (40.96%), Postives = 44/83 (53.01%), Query Frame = 0
Query:    4 KALVSWSPVADDGGSELTKYVVVASTAYADINVEAIATVLPESDGGEPPTEGTVSGLTNGLVYSFQVVAANAFGHSPRSLPSD 86
            +A V+W+    +GGS +T Y V   T Y    V  +A       G  P T  T+SGLTNG+ Y+F V A NA G  P S PS+
Sbjct:   63 QATVTWT-APSNGGSAITSYTV---TPY----VAGVAQPATTVSGSPPATSATISGLTNGVTYTFTVSATNAIGTGPASAPSN 137          
BLAST of mRNA_H-elongata_contig109974.809.1 vs. uniprot
Match: A9A4J1_NITMS (Fibronectin type III domain protein n=2 Tax=Nitrosopumilus maritimus TaxID=338192 RepID=A9A4J1_NITMS)

HSP 1 Score: 56.6 bits (135), Expect = 2.480e-7
Identity = 36/86 (41.86%), Postives = 49/86 (56.98%), Query Frame = 0
Query:    3 QKALVSWSPVADDGGSELTKYVVVASTAYADINVEAIATVLPESDGGEPPTEGTVSGLTNGLVYSFQVVAANAFGHS-PRSLPSDK 87
            Q   +SW+P  D G S +T+Y +     Y+  N +   TV+   D     T  T+SGLTNGL Y FQV+A+NAFG S P ++ S K
Sbjct: 3382 QSVTLSWTPQFDQG-STITQYTI----QYSSDNFQTTGTVVIGDDEALA-TSTTISGLTNGLTYQFQVIASNAFGPSDPSNIKSAK 3461          
BLAST of mRNA_H-elongata_contig109974.809.1 vs. uniprot
Match: R4LVA4_9ACTN (Fibronectin type III domain-containing protein n=2 Tax=Actinoplanes sp. N902-109 TaxID=649831 RepID=R4LVA4_9ACTN)

HSP 1 Score: 56.2 bits (134), Expect = 3.230e-7
Identity = 39/95 (41.05%), Postives = 46/95 (48.42%), Query Frame = 0
Query:    1 ADQKALVSWSPVADDGGSELTKYVVVASTAYADINVEAIATVLPESDGGEPPTEG----------TVSGLTNGLVYSFQVVAANAFGHSPRSLPS 85
            A ++  VSW+P A DGG  +T Y V    AY D      AT  P+   G   TE           TV+GLTNG  Y+FQV A NA G    S PS
Sbjct:  390 APRQVTVSWNPPATDGGPVITSYKV---QAYQDGQPVEGATCTPQVRSGISLTEFRVAASEVLTCTVTGLTNGTAYTFQVTATNAVGTGDASAPS 481          
BLAST of mRNA_H-elongata_contig109974.809.1 vs. uniprot
Match: A0A5C8US72_9MICO (DUF4082 domain-containing protein n=1 Tax=Lacisediminihabitans profunda TaxID=2594790 RepID=A0A5C8US72_9MICO)

HSP 1 Score: 55.8 bits (133), Expect = 4.580e-7
Identity = 34/83 (40.96%), Postives = 44/83 (53.01%), Query Frame = 0
Query:    4 KALVSWSPVADDGGSELTKYVVVASTAYADINVEAIATVLPESDGGEPPTEGTVSGLTNGLVYSFQVVAANAFGHSPRSLPSD 86
            +A V+W+    +GGS +T Y V   T Y    V  IA       G  P T  T++GLTNG+ Y+F V A NA G  P S PS+
Sbjct: 2161 QATVTWT-APSNGGSAITSYTV---TPY----VAGIAQPATTVSGSPPATSATITGLTNGVTYTFTVSATNAIGTGPASAPSN 2235          
BLAST of mRNA_H-elongata_contig109974.809.1 vs. uniprot
Match: A0A7M7N314_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7N314_STRPU)

HSP 1 Score: 55.5 bits (132), Expect = 6.350e-7
Identity = 32/84 (38.10%), Postives = 43/84 (51.19%), Query Frame = 0
Query:    7 VSWSPVADDGGSELTKYVVV----ASTAYADINVEAIATVLPESDGGEPPTEGTVSGLTNGLVYSFQVVAANAFGHSPRSLPSD 86
            ++WSP  DDGGSE+T Y++     A   +  +N E +           P    TV+GLT   +Y F+V A N  G  P SLPSD
Sbjct: 14744 LTWSPPDDDGGSEVTGYILEKRDKARNKWTKVNKEPV-----------PEISFTVTGLTEDAIYDFRVSAVNKAGEGPPSLPSD 14816          
BLAST of mRNA_H-elongata_contig109974.809.1 vs. uniprot
Match: UPI001BB1EEA8 (LOW QUALITY PROTEIN: titin-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB1EEA8)

HSP 1 Score: 53.9 bits (128), Expect = 2.210e-6
Identity = 31/86 (36.05%), Postives = 45/86 (52.33%), Query Frame = 0
Query:    7 VSWSPVADDGGSELTKYVVV----ASTAYADINVEAIATVLPESDGGEPPTEGTVSGLTNGLVYSFQVVAANAFGHSPRSLPSDKV 88
            ++W P  DDGGSE+T Y++     +   + ++N E I           P T  TV+GLT   +Y F+V A N  G  P SLPS+ +
Sbjct: 2138 LTWLPPDDDGGSEVTGYIIEKRDKSRDKWTNVNKEPI-----------PQTSFTVTGLTEDAIYDFRVSAVNIAGVGPPSLPSETI 2212          
BLAST of mRNA_H-elongata_contig109974.809.1 vs. uniprot
Match: UPI001E328FE1 (fibronectin type III domain-containing protein n=1 Tax=Actinoplanes awajinensis TaxID=135946 RepID=UPI001E328FE1)

HSP 1 Score: 53.5 bits (127), Expect = 2.750e-6
Identity = 36/87 (41.38%), Postives = 46/87 (52.87%), Query Frame = 0
Query:    2 DQKALVSWSPVADDGGSELTKYVVVASTAYADINVEAIATVLPESDGGEPPTEGTVSGLTNGLVYSFQVVAANAFGHSPRSLPSDKV 88
            D+ A++ W+    +GGS +  Y V A      I V   AT       G   TE T++GLTNGL YSF V A NA G S  S PS++V
Sbjct:   30 DESAVIRWTAPLHNGGSPIYGYEVQALDDETGIVVNVDAT-------GPEATELTMTGLTNGLPYSFWVRAVNAAGPSDFSTPSNRV 109          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109974.809.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBK9_ECTSI2.980e-2465.12OmpA domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5K857_9PHAE1.080e-875.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A535MTZ7_9CHLR1.760e-740.00Mannan endo-1,4-beta-mannosidase n=2 Tax=Chlorofle... [more]
A0A3C1E2K8_9MICO2.200e-740.96Uncharacterized protein (Fragment) n=1 Tax=Microba... [more]
A9A4J1_NITMS2.480e-741.86Fibronectin type III domain protein n=2 Tax=Nitros... [more]
R4LVA4_9ACTN3.230e-741.05Fibronectin type III domain-containing protein n=2... [more]
A0A5C8US72_9MICO4.580e-740.96DUF4082 domain-containing protein n=1 Tax=Lacisedi... [more]
A0A7M7N314_STRPU6.350e-738.10Uncharacterized protein n=1 Tax=Strongylocentrotus... [more]
UPI001BB1EEA82.210e-636.05LOW QUALITY PROTEIN: titin-like n=1 Tax=Lytechinus... [more]
UPI001E328FE12.750e-641.38fibronectin type III domain-containing protein n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00014FNTYPEIIIcoord: 48..66
score: 27.0
coord: 66..80
score: 40.25
coord: 3..12
score: 23.53
coord: 17..27
score: 28.78
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1..88
e-value: 2.2E-13
score: 52.3
IPR003961Fibronectin type IIIPFAMPF00041fn3coord: 4..82
e-value: 5.2E-7
score: 29.9
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 1..88
score: 13.405
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 5..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig109974contigH-elongata_contig109974:559..822 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig109974.809.1mRNA_H-elongata_contig109974.809.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig109974 559..822 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig109974.809.1 ID=prot_H-elongata_contig109974.809.1|Name=mRNA_H-elongata_contig109974.809.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=88bp
ADQKALVSWSPVADDGGSELTKYVVVASTAYADINVEAIATVLPESDGGE
PPTEGTVSGLTNGLVYSFQVVAANAFGHSPRSLPSDKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR003961FN3_dom
IPR036116FN3_sf