prot_H-elongata_contig109571.775.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig109571.775.1
Unique Nameprot_H-elongata_contig109571.775.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length81
Homology
BLAST of mRNA_H-elongata_contig109571.775.1 vs. uniprot
Match: A0A7S2EVH2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EVH2_TRICV)

HSP 1 Score: 134 bits (337), Expect = 1.870e-37
Identity = 61/78 (78.21%), Postives = 69/78 (88.46%), Query Frame = 0
Query:    4 QRAIQLDSEMTYAYTLCGHEYVVNEDFDKAVACFRMAIRTDRRHYNAWYGLGSIYHRQEKYDMAEYHFRRALSINPQS 81
            +R++QLD   TY++TL GHEYV NEDFDKA ACFR AIR+D RHYNAWYGLG+IY RQEKYD+AEYHFRRALSINPQS
Sbjct:   47 RRSVQLDPSFTYSHTLSGHEYVSNEDFDKAAACFRDAIRSDDRHYNAWYGLGAIYFRQEKYDLAEYHFRRALSINPQS 124          
BLAST of mRNA_H-elongata_contig109571.775.1 vs. uniprot
Match: A0A7S4N5K4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N5K4_9STRA)

HSP 1 Score: 131 bits (330), Expect = 7.730e-34
Identity = 57/78 (73.08%), Postives = 70/78 (89.74%), Query Frame = 0
Query:    4 QRAIQLDSEMTYAYTLCGHEYVVNEDFDKAVACFRMAIRTDRRHYNAWYGLGSIYHRQEKYDMAEYHFRRALSINPQS 81
            +R+++LD   TY++TL GHEYV NEDFDKAV C+R A+R+D RHYNAWYGLG+IY+RQEKYD+AEYHFRRALS+NPQS
Sbjct:  844 RRSVRLDPTFTYSHTLSGHEYVANEDFDKAVQCYRDALRSDGRHYNAWYGLGAIYYRQEKYDLAEYHFRRALSVNPQS 921          
BLAST of mRNA_H-elongata_contig109571.775.1 vs. uniprot
Match: A0A7S1GJ14_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GJ14_CYCTE)

HSP 1 Score: 124 bits (311), Expect = 1.520e-33
Identity = 54/78 (69.23%), Postives = 66/78 (84.62%), Query Frame = 0
Query:    4 QRAIQLDSEMTYAYTLCGHEYVVNEDFDKAVACFRMAIRTDRRHYNAWYGLGSIYHRQEKYDMAEYHFRRALSINPQS 81
            +R+IQLD   TY++TL GHE+  NEDF KAVAC+R AIR D RHYNAWYGLG++YHRQEK+D+AEYHF++A  INPQS
Sbjct:   47 RRSIQLDPSFTYSHTLSGHEHYANEDFVKAVACYRDAIRADERHYNAWYGLGTVYHRQEKFDLAEYHFQKACEINPQS 124          
BLAST of mRNA_H-elongata_contig109571.775.1 vs. uniprot
Match: A0A7S3F8Q8_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3F8Q8_9VIRI)

HSP 1 Score: 126 bits (317), Expect = 2.430e-33
Identity = 57/81 (70.37%), Postives = 67/81 (82.72%), Query Frame = 0
Query:    1 RVAQRAIQLDSEMTYAYTLCGHEYVVNEDFDKAVACFRMAIRTDRRHYNAWYGLGSIYHRQEKYDMAEYHFRRALSINPQS 81
            R  QRA+QL    TYA+TLCGHEY  NED+DK + C+R AIR D RHYNAWYGLG+IY RQEKYD+AE+HFRRAL+INP+S
Sbjct:  148 RFFQRALQLRPGFTYAHTLCGHEYFTNEDYDKGLTCYRGAIRIDARHYNAWYGLGAIYLRQEKYDLAEHHFRRALNINPRS 228          
BLAST of mRNA_H-elongata_contig109571.775.1 vs. uniprot
Match: A0A061R3K8_9CHLO (Anaphase-promoting complex subunit 3 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R3K8_9CHLO)

HSP 1 Score: 129 bits (325), Expect = 3.090e-33
Identity = 57/81 (70.37%), Postives = 69/81 (85.19%), Query Frame = 0
Query:    1 RVAQRAIQLDSEMTYAYTLCGHEYVVNEDFDKAVACFRMAIRTDRRHYNAWYGLGSIYHRQEKYDMAEYHFRRALSINPQS 81
            R+ QRA+QLD + TYA+TLCGHE++ NEDFDK +AC+R A+R DRRH+NAWYGLG IY RQEKY++AE HFRRAL INP S
Sbjct:  484 RLFQRALQLDPDFTYAHTLCGHEHLANEDFDKGLACYRNAVRIDRRHFNAWYGLGQIYLRQEKYELAENHFRRALHINPSS 564          
BLAST of mRNA_H-elongata_contig109571.775.1 vs. uniprot
Match: W7T759_9STRA (Tetratricopeptide TPR-1 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T759_9STRA)

HSP 1 Score: 124 bits (312), Expect = 3.310e-33
Identity = 57/78 (73.08%), Postives = 63/78 (80.77%), Query Frame = 0
Query:    4 QRAIQLDSEMTYAYTLCGHEYVVNEDFDKAVACFRMAIRTDRRHYNAWYGLGSIYHRQEKYDMAEYHFRRALSINPQS 81
            QRAI +D    YAYTLCGHEYV N D DKAVAC+R A+R D RHYNAWYGLG+IY RQEKY++AEYHF RALSIN  S
Sbjct:   88 QRAIAVDPSFVYAYTLCGHEYVCNGDLDKAVACYRYALRLDDRHYNAWYGLGTIYFRQEKYELAEYHFSRALSINTAS 165          
BLAST of mRNA_H-elongata_contig109571.775.1 vs. uniprot
Match: A0A7S4QN69_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QN69_9STRA)

HSP 1 Score: 129 bits (324), Expect = 4.990e-33
Identity = 60/80 (75.00%), Postives = 71/80 (88.75%), Query Frame = 0
Query:    4 QRAIQLDSEMTYAYTLCGHEYVVNEDFDKAVACFRMAIRTDR--RHYNAWYGLGSIYHRQEKYDMAEYHFRRALSINPQS 81
            +R+IQ+DS  TY+YTL GHEYV NEDFDKAV+C+R AIRTD   RHYNAWYGLG+IY RQEKYD+AEYHF++AL+INPQS
Sbjct:  808 RRSIQVDSSFTYSYTLSGHEYVSNEDFDKAVSCYRDAIRTDGCGRHYNAWYGLGAIYFRQEKYDLAEYHFQKALTINPQS 887          
BLAST of mRNA_H-elongata_contig109571.775.1 vs. uniprot
Match: A0A7S2UWI3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWI3_9STRA)

HSP 1 Score: 125 bits (313), Expect = 6.020e-33
Identity = 55/78 (70.51%), Postives = 68/78 (87.18%), Query Frame = 0
Query:    4 QRAIQLDSEMTYAYTLCGHEYVVNEDFDKAVACFRMAIRTDRRHYNAWYGLGSIYHRQEKYDMAEYHFRRALSINPQS 81
            +RAIQ+     YA+TLCGHEYV NEDFD+A+AC+R A+R D+RHYNAWYGLG+IY RQEKY++AEYHFRRAL+I+P S
Sbjct:  141 KRAIQVCPWFYYAHTLCGHEYVANEDFDRAMACYRDALRLDKRHYNAWYGLGTIYQRQEKYELAEYHFRRALAIHPSS 218          
BLAST of mRNA_H-elongata_contig109571.775.1 vs. uniprot
Match: B8BVV5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVV5_THAPS)

HSP 1 Score: 125 bits (313), Expect = 7.490e-33
Identity = 55/77 (71.43%), Postives = 67/77 (87.01%), Query Frame = 0
Query:    5 RAIQLDSEMTYAYTLCGHEYVVNEDFDKAVACFRMAIRTDRRHYNAWYGLGSIYHRQEKYDMAEYHFRRALSINPQS 81
            R+IQLD   TYA+T+CGHEY+ NEDF+KA++C+R AIR D RHYNAWYGLG+IY RQEK+D+AEYHF+RAL IN QS
Sbjct:  156 RSIQLDPTYTYAHTMCGHEYMSNEDFEKAISCYRDAIRVDCRHYNAWYGLGAIYFRQEKFDLAEYHFQRALDINRQS 232          
BLAST of mRNA_H-elongata_contig109571.775.1 vs. uniprot
Match: A0A1Z5K6F8_FISSO (Anaphase-promoting complex subunit 3 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K6F8_FISSO)

HSP 1 Score: 125 bits (315), Expect = 6.510e-32
Identity = 54/78 (69.23%), Postives = 65/78 (83.33%), Query Frame = 0
Query:    4 QRAIQLDSEMTYAYTLCGHEYVVNEDFDKAVACFRMAIRTDRRHYNAWYGLGSIYHRQEKYDMAEYHFRRALSINPQS 81
            +R++QLD   TY +TLCG+EY+ NEDF+ A+ACFR AIRT+ RHYNAWYGLG IYHRQEKYD+AEYHF RA  I+P S
Sbjct:  444 KRSLQLDPNFTYTHTLCGYEYMANEDFEPAMACFRQAIRTNERHYNAWYGLGCIYHRQEKYDLAEYHFERACQIHPTS 521          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109571.775.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2EVH2_TRICV1.870e-3778.21Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S4N5K4_9STRA7.730e-3473.08Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S1GJ14_CYCTE1.520e-3369.23Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S3F8Q8_9VIRI2.430e-3370.37Hypothetical protein n=1 Tax=Prasinoderma singular... [more]
A0A061R3K8_9CHLO3.090e-3370.37Anaphase-promoting complex subunit 3 n=1 Tax=Tetra... [more]
W7T759_9STRA3.310e-3373.08Tetratricopeptide TPR-1 n=2 Tax=Nannochloropsis ga... [more]
A0A7S4QN69_9STRA4.990e-3375.00Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A7S2UWI3_9STRA6.020e-3370.51Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
B8BVV5_THAPS7.490e-3371.43Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A1Z5K6F8_FISSO6.510e-3269.23Anaphase-promoting complex subunit 3 n=2 Tax=Fistu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 14..47
e-value: 0.058
score: 22.5
coord: 48..81
e-value: 2.4E-7
score: 40.4
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 14..47
score: 8.88
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 48..81
score: 10.207
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..77
e-value: 3.2E-27
score: 96.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 4..80
IPR001440Tetratricopeptide repeat 1PFAMPF00515TPR_1coord: 49..80
e-value: 4.1E-11
score: 42.2
NoneNo IPR availablePANTHERPTHR12558CELL DIVISION CYCLE 16,23,27coord: 4..81
NoneNo IPR availablePANTHERPTHR12558:SF13CELL DIVISION CYCLE PROTEIN 27 HOMOLOGcoord: 4..81
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..81
score: 21.724

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig109571contigH-elongata_contig109571:320..1237 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig109571.775.1mRNA_H-elongata_contig109571.775.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig109571 320..1237 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig109571.775.1 ID=prot_H-elongata_contig109571.775.1|Name=mRNA_H-elongata_contig109571.775.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=81bp
RVAQRAIQLDSEMTYAYTLCGHEYVVNEDFDKAVACFRMAIRTDRRHYNA
WYGLGSIYHRQEKYDMAEYHFRRALSINPQS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR001440TPR_1
IPR013026TPR-contain_dom