prot_H-elongata_contig109502.771.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig109502.771.1
Unique Name	prot_H-elongata_contig109502.771.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	191

Homology

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BLAST of mRNA_H-elongata_contig109502.771.1 vs. uniprot
Match: D7FS01_ECTSI (Beta-galactosidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS01_ECTSI)

HSP 1 Score: 268 bits (684), Expect = 1.160e-79
Identity = 135/214 (63.08%), Postives = 153/214 (71.50%), Query Frame = 0

Query:    1 RANVELPVASENVLNLDGAWRFALHPSPEKAIDSAFFRKGFHEEAFAAGGG----------------DTKGVRGADGSWKDTPVPSCWQLQGYDVPIYTNFRYPFPVTPPEVPATNPTGCYRLAFSVPEAW-------VRPDAISEQRKIVLHFAGVDGAFFAWVNGRLAGFSKDSRLPAEFDVTDKINIESPSENVLSVMVLRWSDASYLEDQ 191
            RAN ELP AS NVL+LDG WRFALH  PE A+ S FF + F E   AA GG                 + GVRGADG W+DTPVPSCWQ+QGYDVPIYTN +YPFPV PP VPA NPTGCYRL FS+P+AW              EQR+++LHFAGVD AFFAWVNG L GFSKDSRLPAEF+VT+++   S ++NVLSVMVLRWSDASYLEDQ
Sbjct:  127 RANPELPEASNNVLSLDGTWRFALHSCPEHALASRFFSRKFRE---AAAGGLLERGGSGVXXXXXXXXSGGVRGADGRWRDTPVPSCWQMQGYDVPIYTNIQYPFPVNPPTVPADNPTGCYRLEFSLPDAWGTSGXXXXXXRTAVEQRRVILHFAGVDSAFFAWVNGHLVGFSKDSRLPAEFEVTERVLYGSSAKNVLSVMVLRWSDASYLEDQ 337

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BLAST of mRNA_H-elongata_contig109502.771.1 vs. uniprot
Match: A0A6H5KER6_9PHAE (GH2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KER6_9PHAE)

HSP 1 Score: 240 bits (613), Expect = 4.570e-76
Identity = 127/214 (59.35%), Postives = 146/214 (68.22%), Query Frame = 0

Query:    1 RANVELPVASENVLNLDGAWRFALHPSPEKAIDSAFFRKGFHEEAFAAGGGDTKG---------------VRGADGSWKDTPVPSCWQLQGYDVPIYTNFRYPFPVTPPEVPATNPTGCYRLAFSVPEAW--------VRPDAISEQRKIVLHFAGVDGAFFAWVNGRLAGFSKDSRLPAEFDVTDKINIESPSENVLSVMVLRWSDASYLEDQ 191
            RAN ELP AS+NVL+LDG WRFALH  PE A+ S FF + F E A  AGG   +G               VRGADG W+DTP        GYDVPIYTN +YPFPV PP VP+ NPTGCYRL FS+P+AW               EQR+++LHFAGVD AFFAWVNG L GFSKDSRLPAEF+VT+++   S ++NVLSVMVLRWSDASYLEDQ
Sbjct:  127 RANTELPEASKNVLSLDGTWRFALHSCPEHALASRFFSRNFREAA--AGGLLERGGSGVSXXXXXXXSGDVRGADGRWRDTP--------GYDVPIYTNIQYPFPVNPPTVPSDNPTGCYRLEFSLPDAWGTSGXXXXXXXXTAVEQRRVILHFAGVDSAFFAWVNGHLVGFSKDSRLPAEFEVTERVLYGSSAKNVLSVMVLRWSDASYLEDQ 330

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BLAST of mRNA_H-elongata_contig109502.771.1 vs. uniprot
Match: S8CWP1_9LAMI (Uncharacterized protein n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CWP1_9LAMI)

HSP 1 Score: 177 bits (449), Expect = 3.050e-49
Identity = 90/180 (50.00%), Postives = 111/180 (61.67%), Query Frame = 0

Query:   13 VLNLDGAWRFALHPSPEKAIDSAFFRKGFHEEAFAAGGGDTKGVRGADGSWKDTPVPSCWQLQGYDVPIYTNFRYPFPVTPPEVPATNPTGCYRLAFSVPEAWVRPDAISEQRKIVLHFAGVDGAFFAWVNGRLAGFSKDSRLPAEFDVTDKIN-IESPSENVLSVMVLRWSDASYLEDQ 191
            V +L G+W+F L  SP+  + S F+   F                  D SW   PVPS WQ+ G+D PIYTN  YPFP+ PP VP  NPTGCYR  FS+P  W       E R+I LHF GVD AFFAW+NG   G+S+DSRLPAEF++T+  + +ES   N LSV+V+RWSD SYLEDQ
Sbjct:   87 VKSLSGSWKFFLGSSPDD-VPSKFYEISFD-----------------DSSWHSLPVPSNWQMHGFDKPIYTNVVYPFPLDPPNVPEDNPTGCYRTYFSIPSKW-------EGRRIFLHFEGVDSAFFAWINGHPVGYSQDSRLPAEFEITEFCHALESGQRNCLSVIVMRWSDGSYLEDQ 241

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BLAST of mRNA_H-elongata_contig109502.771.1 vs. uniprot
Match: A0A0K9PM40_ZOSMR (Glyco_hydro_2_N domain-containing protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PM40_ZOSMR)

HSP 1 Score: 169 bits (429), Expect = 5.490e-49
Identity = 86/180 (47.78%), Postives = 110/180 (61.11%), Query Frame = 0

Query:   13 VLNLDGAWRFALHPSPEKAIDSAFFRKGFHEEAFAAGGGDTKGVRGADGSWKDTPVPSCWQLQGYDVPIYTNFRYPFPVTPPEVPATNPTGCYRLAFSVPEAWVRPDAISEQRKIVLHFAGVDGAFFAWVNGRLAGFSKDSRLPAEFDVTDKIN-IESPSENVLSVMVLRWSDASYLEDQ 191
            V +L G W+F L  +P+           FH   F             D SW   PVPS WQ+ G+D PIYTN  YPFP+ PP VP+ NPTGCYR  F +P+ W       + R+I+LHF GVD AFFAW+NG L G+S+DSRLPAEF++T   +  +S  EN+L+V V+RWS+ SYLEDQ
Sbjct:   85 VKSLSGYWKFHLASNPDAVPHE------FHGTCFD------------DSSWDALPVPSNWQMHGFDTPIYTNIVYPFPLNPPYVPSENPTGCYRKNFHIPKEW-------KDRRILLHFEGVDSAFFAWLNGILVGYSEDSRLPAEFEITKWCHPFDSNMENILAVQVMRWSNGSYLEDQ 239

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BLAST of mRNA_H-elongata_contig109502.771.1 vs. uniprot
Match: A0A6P6FZK7_ZIZJJ (LOW QUALITY PROTEIN: uncharacterized protein LOC107412906 n=1 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P6FZK7_ZIZJJ)

HSP 1 Score: 179 bits (454), Expect = 6.280e-49
Identity = 92/180 (51.11%), Postives = 112/180 (62.22%), Query Frame = 0

Query:   13 VLNLDGAWRFALHPSPEKAIDSAFFRKGFHEEAFAAGGGDTKGVRGADGSWKDTPVPSCWQLQGYDVPIYTNFRYPFPVTPPEVPATNPTGCYRLAFSVPEAWVRPDAISEQRKIVLHFAGVDGAFFAWVNGRLAGFSKDSRLPAEFDVTDKIN-IESPSENVLSVMVLRWSDASYLEDQ 191
            V +L G WRF L  SP K  ++      FH+ AF             D  WK  PVPS WQ+ G+D PIYTNF YPFP  PP VP  NPTGCYR  F +PE W       + R+I+LHF  VD AFFAW+NG   G+S+DSRLPAEF++TD  + I S ++NVL+V V +WSD SYLEDQ
Sbjct:   89 VKSLSGYWRFFLASSPSKVPEN------FHDSAFH------------DSEWKTLPVPSNWQMHGFDHPIYTNFTYPFPFDPPFVPKENPTGCYRTYFKIPEEW-------KGRRILLHFQAVDSAFFAWINGVPVGYSQDSRLPAEFEITDYCHPIGSGNKNVLAVQVFKWSDGSYLEDQ 243

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BLAST of mRNA_H-elongata_contig109502.771.1 vs. uniprot
Match: A0A835ZBT9_9STRA (Beta-galactosidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBT9_9STRA)

HSP 1 Score: 180 bits (456), Expect = 6.340e-49
Identity = 94/192 (48.96%), Postives = 115/192 (59.90%), Query Frame = 0

Query:    3 NVELPVASENVLNLDGAWRFALHPSPEKAIDSAFFRKGFHEEAFAAGGGDTKGVRGADGSWKDTPVPSCWQLQ---GYDVPIYTNFRYPFPVTPPEVPATNPTGCYRLAFSVPEAWVRPDAISEQRKIVLHFAGVDGAFFAWVNGRLAGFSKDSRLPAEFDVTDKINIESPSENVLSVMVLRWSDASYLEDQ 191
            +V  P AS    +LDG W F L  SPE+A+ + F+R+  H  A                 W+   VP CWQLQ   G D PIYTN +YP PVTPP VP  NPTGCY     V + W         R+IVLHF GVD AF+ WVNG+L GFSKDSRLPAEFDVT+ +N  +   N ++VMV+RWSD ++LEDQ
Sbjct:   44 HVGAPEASPYTQSLDGDWNFKLFGSPEEALTTQFWRQSDHSPAE---------------QWRPLAVPGCWQLQLEPGADPPIYTNIQYPIPVTPPRVPERNPTGCYVRTVEVAQGWAG-------RRIVLHFGGVDSAFYVWVNGQLQGFSKDSRLPAEFDVTEALN--TTGANTVAVMVVRWSDGAFLEDQ 211

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BLAST of mRNA_H-elongata_contig109502.771.1 vs. uniprot
Match: UPI001E8A8329 (Uncharacterized protein n=1 Tax=Ziziphus jujuba var. spinosa TaxID=714518 RepID=UPI001E8A8329)

HSP 1 Score: 178 bits (452), Expect = 7.410e-49
Identity = 91/178 (51.12%), Postives = 111/178 (62.36%), Query Frame = 0

Query:   15 NLDGAWRFALHPSPEKAIDSAFFRKGFHEEAFAAGGGDTKGVRGADGSWKDTPVPSCWQLQGYDVPIYTNFRYPFPVTPPEVPATNPTGCYRLAFSVPEAWVRPDAISEQRKIVLHFAGVDGAFFAWVNGRLAGFSKDSRLPAEFDVTDKIN-IESPSENVLSVMVLRWSDASYLEDQ 191
            +L G WRF L  SP K  ++      FH+ AF             D  WK  PVPS WQ+ G+D PIYTNF YPFP  PP VP  NPTGCYR  F +PE W       + R+I+LHF  VD AFFAW+NG   G+S+DSRLPAEF++TD  + I S ++NVL+V V +WSD SYLEDQ
Sbjct:   20 SLSGYWRFFLASSPSKVPEN------FHDSAFH------------DSEWKTLPVPSNWQMHGFDHPIYTNFTYPFPFDPPFVPKENPTGCYRTYFQIPEEW-------KGRRILLHFQAVDSAFFAWINGVPVGYSQDSRLPAEFEITDYCHPIGSGNKNVLAVQVFKWSDGSYLEDQ 172

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BLAST of mRNA_H-elongata_contig109502.771.1 vs. uniprot
Match: A0A453GP06_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453GP06_AEGTS)

HSP 1 Score: 171 bits (434), Expect = 1.020e-48
Identity = 87/178 (48.88%), Postives = 110/178 (61.80%), Query Frame = 0

Query:   15 NLDGAWRFALHPSPEKAIDSAFFRKGFHEEAFAAGGGDTKGVRGADGSWKDTPVPSCWQLQGYDVPIYTNFRYPFPVTPPEVPATNPTGCYRLAFSVPEAWVRPDAISEQRKIVLHFAGVDGAFFAWVNGRLAGFSKDSRLPAEFDVTDKIN-IESPSENVLSVMVLRWSDASYLEDQ 191
            +L G W+F L  SPE   D       F++  F             D  W+  PVPS WQ+ G+D PIYTN  YPFP+ PP VP+ NPTGCYR+ F +P+ W       + R+I+LHF  VD AF AWVNG   G+S+DSRLPAEF++TD  +  +S  ENVL+V V+RWSD SYLEDQ
Sbjct:   94 SLSGHWKFRLAQSPETVPDK------FYDAQFN------------DSDWEALPVPSNWQMHGFDRPIYTNVTYPFPMNPPFVPSENPTGCYRMVFHIPKEW-------KGRRILLHFEAVDSAFLAWVNGVPIGYSQDSRLPAEFEITDCCHHCDSDKENVLAVQVMRWSDGSYLEDQ 246

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BLAST of mRNA_H-elongata_contig109502.771.1 vs. uniprot
Match: A0A1D6N0Y0_MAIZE (Glycoside hydrolase family 2 protein n=3 Tax=Zea mays TaxID=4577 RepID=A0A1D6N0Y0_MAIZE)

HSP 1 Score: 176 bits (447), Expect = 2.720e-48
Identity = 90/178 (50.56%), Postives = 111/178 (62.36%), Query Frame = 0

Query:   15 NLDGAWRFALHPSPEKAIDSAFFRKGFHEEAFAAGGGDTKGVRGADGSWKDTPVPSCWQLQGYDVPIYTNFRYPFPVTPPEVPATNPTGCYRLAFSVPEAWVRPDAISEQRKIVLHFAGVDGAFFAWVNGRLAGFSKDSRLPAEFDVTDKIN-IESPSENVLSVMVLRWSDASYLEDQ 191
            +L G W+F L PS E +I   F+   F                  D +W   PVPS WQ+ G+D PIYTN  YPFP+ PP VPA NPTGCYR  F +P+ W       + R+I+LHF  VD AFFAWVNG L G+S+DSRLPAEF++TD  +  +S  ENVL+V V+RWSD SYLEDQ
Sbjct:   90 SLSGYWKFLLSPSAE-SIPERFYYAHFD-----------------DSNWSGLPVPSNWQMHGFDRPIYTNVTYPFPLNPPFVPADNPTGCYRTVFHIPKEW-------KGRRILLHFEAVDSAFFAWVNGVLVGYSQDSRLPAEFEITDCCHPCDSDKENVLAVQVMRWSDGSYLEDQ 242

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BLAST of mRNA_H-elongata_contig109502.771.1 vs. uniprot
Match: A0A6P3ZLS4_ZIZJJ (uncharacterized protein LOC107412905 n=1 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P3ZLS4_ZIZJJ)

HSP 1 Score: 173 bits (438), Expect = 5.970e-48
Identity = 90/180 (50.00%), Postives = 110/180 (61.11%), Query Frame = 0

Query:   13 VLNLDGAWRFALHPSPEKAIDSAFFRKGFHEEAFAAGGGDTKGVRGADGSWKDTPVPSCWQLQGYDVPIYTNFRYPFPVTPPEVPATNPTGCYRLAFSVPEAWVRPDAISEQRKIVLHFAGVDGAFFAWVNGRLAGFSKDSRLPAEFDVTDKIN-IESPSENVLSVMVLRWSDASYLEDQ 191
            V +L G WRF L  SP K  ++      FH+ AF             D  WK  PVPS WQ+ G+D PIYTN  YPFP  PP V   NPTGCYR  F +PE W       + R+I+LHF  VD AFFAW+NG   G+S+DSRLPAEF++TD  + I S ++NVL+V V +WSD SYLEDQ
Sbjct:  121 VKSLSGYWRFFLASSPSKVPEN------FHDSAFH------------DSEWKTLPVPSNWQMHGFDHPIYTNTTYPFPFDPPFVSKENPTGCYRTYFQIPEEW-------KGRRILLHFQAVDSAFFAWINGVPVGYSQDSRLPAEFEITDYCHPIGSGTKNVLAVQVFKWSDGSYLEDQ 275

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig109502.771.1 vs. uniprot

BLAST of mRNA_H-elongata_contig109502.771.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FS01_ECTSI	1.160e-79	63.08	Beta-galactosidase n=1 Tax=Ectocarpus siliculosus ...	[more]
A0A6H5KER6_9PHAE	4.570e-76	59.35	GH2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
S8CWP1_9LAMI	3.050e-49	50.00	Uncharacterized protein n=1 Tax=Genlisea aurea Tax...	[more]
A0A0K9PM40_ZOSMR	5.490e-49	47.78	Glyco_hydro_2_N domain-containing protein n=1 Tax=...	[more]
A0A6P6FZK7_ZIZJJ	6.280e-49	51.11	LOW QUALITY PROTEIN: uncharacterized protein LOC10...	[more]
A0A835ZBT9_9STRA	6.340e-49	48.96	Beta-galactosidase n=1 Tax=Tribonema minus TaxID=3...	[more]
UPI001E8A8329	7.410e-49	51.12	Uncharacterized protein n=1 Tax=Ziziphus jujuba va...	[more]
A0A453GP06_AEGTS	1.020e-48	48.88	Uncharacterized protein n=1 Tax=Aegilops tauschii ...	[more]
A0A1D6N0Y0_MAIZE	2.720e-48	50.56	Glycoside hydrolase family 2 protein n=3 Tax=Zea m...	[more]
A0A6P3ZLS4_ZIZJJ	5.970e-48	50.00	uncharacterized protein LOC107412905 n=1 Tax=Zizip...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006104	Glycosyl hydrolases family 2, sugar binding domain	PFAM	PF02837	Glyco_hydro_2_N	coord: 15..191 e-value: 2.2E-31 score: 109.0
IPR008979	Galactose-binding-like domain superfamily	GENE3D	2.60.120.260		coord: 2..191 e-value: 9.5E-55 score: 187.5
IPR008979	Galactose-binding-like domain superfamily	SUPERFAMILY	49785	Galactose-binding domain-like	coord: 9..191
IPR023933	Glycoside hydrolase, family 2, beta-galactosidase	PANTHER	PTHR46323	FAMILY NOT NAMED	coord: 7..191

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig109502	contig	H-elongata_contig109502:510..2082 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig109502.771.1	mRNA_H-elongata_contig109502.771.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig109502 510..2082 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig109502.771.1 ID=prot_H-elongata_contig109502.771.1|Name=mRNA_H-elongata_contig109502.771.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=191bp
RANVELPVASENVLNLDGAWRFALHPSPEKAIDSAFFRKGFHEEAFAAGG
GDTKGVRGADGSWKDTPVPSCWQLQGYDVPIYTNFRYPFPVTPPEVPATN
PTGCYRLAFSVPEAWVRPDAISEQRKIVLHFAGVDGAFFAWVNGRLAGFS
KDSRLPAEFDVTDKINIESPSENVLSVMVLRWSDASYLEDQ

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006104	Glyco_hydro_2_N
IPR008979	Galactose-bd-like_sf
IPR023933	Glyco_hydro_2_beta_Galsidase