prot_H-elongata_contig109257.749.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig109257.749.1
Unique Nameprot_H-elongata_contig109257.749.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length89
Homology
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BLAST of mRNA_H-elongata_contig109257.749.1 vs. uniprot
Match: D7FT17_ECTSI (RED_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT17_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 2.500e-22
Identity = 65/90 (72.22%), Postives = 71/90 (78.89%), Query Frame = 0 
Query:    1 DTTNKKDAKPGPEVGVPGSGXXXXXXXXXDDGENPNNHPAFDKPKASFPFGIKKSEMSSRKTTGGK--SGSKHRVDNELNIIKKYMKGEK 88
            D TNKKDAKPGPE    G  XXXXXXXXX    N + HPA+DKPKASFPFG+K+SE+S RK  GG   SGSKHRVDNELNIIKKYMKG+K
Sbjct:  351 DATNKKDAKPGPE----GXXXXXXXXXXXXXXXNHDKHPAYDKPKASFPFGVKRSELSGRKGGGGSKSSGSKHRVDNELNIIKKYMKGDK 436
[Close]
BLAST of mRNA_H-elongata_contig109257.749.1 vs. uniprot
Match: A0A6H5L4J3_9PHAE (RED_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4J3_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 7.540e-22
Identity = 65/90 (72.22%), Postives = 71/90 (78.89%), Query Frame = 0 
Query:    1 DTTNKKDAKPGPEVGVPGSGXXXXXXXXXDDGENPNNHPAFDKPKASFPFGIKKSEMSSRKTTGGK--SGSKHRVDNELNIIKKYMKGEK 88
            D TNKKDAKPGPE    G  XXXXXXXXX    N + HPA+DKPKASFPFG+K+SE+S RK  GG   SGSKHRVDNELNIIKKYMKG+K
Sbjct:  480 DATNKKDAKPGPE----GXXXXXXXXXXXXXXXNHDKHPAYDKPKASFPFGVKRSELSVRKGGGGSKSSGSKHRVDNELNIIKKYMKGDK 565
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109257.749.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FT17_ECTSI2.500e-2272.22RED_N domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5L4J3_9PHAE7.540e-2272.22RED_N domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig109257contigH-elongata_contig109257:1454..1720 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig109257.749.1mRNA_H-elongata_contig109257.749.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig109257 1454..1720 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig109257.749.1 ID=prot_H-elongata_contig109257.749.1|Name=mRNA_H-elongata_contig109257.749.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=89bp
DTTNKKDAKPGPEVGVPGSGGSGGGGGGADDGENPNNHPAFDKPKASFPF
GIKKSEMSSRKTTGGKSGSKHRVDNELNIIKKYMKGEK*
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