prot_H-elongata_contig109257.748.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig109257.748.1
Unique Nameprot_H-elongata_contig109257.748.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length135
Homology
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BLAST of mRNA_H-elongata_contig109257.748.1 vs. uniprot
Match: D7FT17_ECTSI (RED_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT17_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 5.020e-35
Identity = 88/136 (64.71%), Postives = 96/136 (70.59%), Query Frame = 0 
Query:    1 RYVPPSSGASAAA--ANAKGATAGYFSGLRAQKGGEAGRAGTGAVGSLPTRAEMSATVKAAARAAAARLASDKKPSAPAARGGDGARMDRGGEGGSKIERDIFAKRPSRGQALGVASGGYDVYPETGDFETYDSDE 134
            RYVPP S  SA+     A GA  GYFSGLRA+    AG +       LPTRAEMSATVKAAARAAAAR++ DKK S+     G GAR      G  KIERDIFA RPSRGQALGV++GGYDVYPETGDFETYDSDE
Sbjct:  223 RYVPPGSAGSASQPPVGAAGAAKGYFSGLRAKN---AGDSADNKADVLPTRAEMSATVKAAARAAAARVSGDKKASS-----GAGARETGKSGGRDKIERDIFAARPSRGQALGVSAGGYDVYPETGDFETYDSDE 350
[Close]
BLAST of mRNA_H-elongata_contig109257.748.1 vs. uniprot
Match: A0A6H5L4J3_9PHAE (RED_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4J3_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 4.200e-34
Identity = 87/136 (63.97%), Postives = 96/136 (70.59%), Query Frame = 0 
Query:    1 RYVPPSSGASAAA--ANAKGATAGYFSGLRAQKGGEAGRAGTGAVGSLPTRAEMSATVKAAARAAAARLASDKKPSAPAARGGDGARMDRGGEGGSKIERDIFAKRPSRGQALGVASGGYDVYPETGDFETYDSDE 134
            RYVPP S  SA+     A GA  GYFSGLRA+  G++          LPTRAEMSATVKAAARAAAAR++ DKK S+ A     GAR      G  KIERDIFA RPSRGQALGV++GGYDVYPETGDFETYDSDE
Sbjct:  353 RYVPPGSAGSASQPPVGAAGAAKGYFSGLRAKNAGDS----DNKADVLPTRAEMSATVKAAARAAAARVSGDKKTSSEA-----GARETGKSGGRDKIERDIFAARPSRGQALGVSAGGYDVYPETGDFETYDSDE 479
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109257.748.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FT17_ECTSI5.020e-3564.71RED_N domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5L4J3_9PHAE4.200e-3463.97RED_N domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig109257contigH-elongata_contig109257:43..447 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig109257.748.1mRNA_H-elongata_contig109257.748.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig109257 43..448 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig109257.748.1 ID=prot_H-elongata_contig109257.748.1|Name=mRNA_H-elongata_contig109257.748.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=135bp
RYVPPSSGASAAAANAKGATAGYFSGLRAQKGGEAGRAGTGAVGSLPTRA
EMSATVKAAARAAAARLASDKKPSAPAARGGDGARMDRGGEGGSKIERDI
FAKRPSRGQALGVASGGYDVYPETGDFETYDSDEA
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