prot_H-elongata_contig109249.747.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig109249.747.1
Unique Nameprot_H-elongata_contig109249.747.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length79
Homology
BLAST of mRNA_H-elongata_contig109249.747.1 vs. uniprot
Match: A0A6H5JA57_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JA57_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 2.860e-28
Identity = 60/69 (86.96%), Postives = 62/69 (89.86%), Query Frame = 0
Query:    1 MIGNVDSGKSTLIGVLSSAGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYGKDGEQVQDRGTSGL 69
            MIGNVDSGKSTLIGVLSS+GLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGY KDG+QV     S L
Sbjct:  110 MIGNVDSGKSTLIGVLSSSGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYAKDGKQVVPTARSHL 178          
BLAST of mRNA_H-elongata_contig109249.747.1 vs. uniprot
Match: A0A7R9UAM3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAM3_9STRA)

HSP 1 Score: 105 bits (261), Expect = 1.310e-24
Identity = 53/61 (86.89%), Postives = 60/61 (98.36%), Query Frame = 0
Query:    1 MIGNVDSGKSTLIGVLSSAGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYGKDGEQV 61
            MIGNVDSGKSTLIGVL+SAGLDDGRG+ARSLVL+HRHEQ+NGRTSAVT+E+MGY +DGEQV
Sbjct:  155 MIGNVDSGKSTLIGVLTSAGLDDGRGSARSLVLKHRHEQDNGRTSAVTVEVMGY-RDGEQV 214          
BLAST of mRNA_H-elongata_contig109249.747.1 vs. uniprot
Match: A0A7S2BKI3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BKI3_9STRA)

HSP 1 Score: 103 bits (258), Expect = 2.990e-24
Identity = 55/61 (90.16%), Postives = 58/61 (95.08%), Query Frame = 0
Query:    1 MIGNVDSGKSTLIGVLSSAGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYGKDGEQV 61
            MIGNVDSGKSTLIGVL+SA LDDGRG ARSLVLRHRHEQENGRTSAVT+E+MGY KDGEQV
Sbjct:   88 MIGNVDSGKSTLIGVLTSACLDDGRGLARSLVLRHRHEQENGRTSAVTVELMGY-KDGEQV 147          
BLAST of mRNA_H-elongata_contig109249.747.1 vs. uniprot
Match: A0A7S3HE85_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HE85_9STRA)

HSP 1 Score: 100 bits (250), Expect = 2.140e-23
Identity = 55/67 (82.09%), Postives = 61/67 (91.04%), Query Frame = 0
Query:    1 MIGNVDSGKSTLIGVLSSAGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYGKDGEQVQDRGTS 67
            MIGNVDSGKSTLIG+L++A LDDGRGAARSLVL+HRHEQENGRTSAVT+EIMGY K+G QV   GTS
Sbjct:   69 MIGNVDSGKSTLIGILTNATLDDGRGAARSLVLKHRHEQENGRTSAVTVEIMGY-KEGTQVY--GTS 132          
BLAST of mRNA_H-elongata_contig109249.747.1 vs. uniprot
Match: A0A7S2WNE9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WNE9_9STRA)

HSP 1 Score: 100 bits (248), Expect = 7.560e-23
Identity = 51/61 (83.61%), Postives = 58/61 (95.08%), Query Frame = 0
Query:    1 MIGNVDSGKSTLIGVLSSAGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYGKDGEQV 61
            MIGNVDSGKSTLIGVL+SA LDDGRG ARS++LRHRHEQENGRTSAV++E+MGY +DGEQV
Sbjct:   45 MIGNVDSGKSTLIGVLTSASLDDGRGLARSVMLRHRHEQENGRTSAVSVELMGY-RDGEQV 104          
BLAST of mRNA_H-elongata_contig109249.747.1 vs. uniprot
Match: W7TYD2_9STRA (Gtp-binding protein 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYD2_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.080e-22
Identity = 50/65 (76.92%), Postives = 59/65 (90.77%), Query Frame = 0
Query:    1 MIGNVDSGKSTLIGVLSSAGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYGKDGEQVQDRG 65
            MIGNVD+GKSTLIGVL++A LDDGRG+ARSLVL+HRHEQENGRTSAVT+E++GY   GEQV  +G
Sbjct:   92 MIGNVDAGKSTLIGVLTNAILDDGRGSARSLVLKHRHEQENGRTSAVTIELLGYKGTGEQVLPQG 156          
BLAST of mRNA_H-elongata_contig109249.747.1 vs. uniprot
Match: A0A6V2X5T2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2X5T2_HETAK)

HSP 1 Score: 97.1 bits (240), Expect = 7.780e-22
Identity = 48/61 (78.69%), Postives = 55/61 (90.16%), Query Frame = 0
Query:    1 MIGNVDSGKSTLIGVLSSAGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYGKDGEQV 61
            MIGNVDSGKSTLIGVL++  LDDGRGAARS VL+HRHEQENGRTSAV++E+MGY +  EQV
Sbjct:   61 MIGNVDSGKSTLIGVLTNCTLDDGRGAARSSVLKHRHEQENGRTSAVSVEVMGYNEKNEQV 121          
BLAST of mRNA_H-elongata_contig109249.747.1 vs. uniprot
Match: A0A836C8C3_9STRA (Elongation factor Tu GTP binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8C3_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 8.020e-22
Identity = 49/61 (80.33%), Postives = 54/61 (88.52%), Query Frame = 0
Query:    1 MIGNVDSGKSTLIGVLSSAGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYGKDGEQV 61
            MIGNVDSGKSTLIGVL +   DDGRG+ARSLVL+HRHEQENGRTSAVT EIMGY  +G+QV
Sbjct:    1 MIGNVDSGKSTLIGVLCNRCTDDGRGSARSLVLKHRHEQENGRTSAVTTEIMGYTAEGDQV 61          
BLAST of mRNA_H-elongata_contig109249.747.1 vs. uniprot
Match: A0A812UTX0_SYMMI (GTPBP1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UTX0_SYMMI)

HSP 1 Score: 95.1 bits (235), Expect = 2.930e-21
Identity = 47/61 (77.05%), Postives = 55/61 (90.16%), Query Frame = 0
Query:    1 MIGNVDSGKSTLIGVLSSAGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYGKDGEQV 61
            M+GNVDSGKSTL+GVL+SA LDDGRG ARSL+L+HRHEQ+NGRTSA T+EIMG+ KD  QV
Sbjct:    1 MVGNVDSGKSTLVGVLTSAALDDGRGCARSLILKHRHEQDNGRTSAATVEIMGF-KDNTQV 60          
BLAST of mRNA_H-elongata_contig109249.747.1 vs. uniprot
Match: F0Y7C9_AURAN (Tr-type G domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7C9_AURAN)

HSP 1 Score: 92.0 bits (227), Expect = 3.610e-20
Identity = 44/54 (81.48%), Postives = 51/54 (94.44%), Query Frame = 0
Query:    1 MIGNVDSGKSTLIGVLSSAGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGY 54
            MIGNVDSGKSTLIGVL++ GLDDGRG ARSLVLRH+HEQENGRTS V++E+MG+
Sbjct:    9 MIGNVDSGKSTLIGVLTAGGLDDGRGGARSLVLRHKHEQENGRTSTVSVELMGF 62          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109249.747.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JA57_9PHAE2.860e-2886.96Tr-type G domain-containing protein n=2 Tax=Ectoca... [more]
A0A7R9UAM3_9STRA1.310e-2486.89Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2BKI3_9STRA2.990e-2490.16Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S3HE85_9STRA2.140e-2382.09Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S2WNE9_9STRA7.560e-2383.61Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
W7TYD2_9STRA1.080e-2276.92Gtp-binding protein 1 n=2 Tax=Monodopsidaceae TaxI... [more]
A0A6V2X5T2_HETAK7.780e-2278.69Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A836C8C3_9STRA8.020e-2280.33Elongation factor Tu GTP binding domain-containing... [more]
A0A812UTX0_SYMMI2.930e-2177.05GTPBP1 protein n=1 Tax=Symbiodinium microadriaticu... [more]
F0Y7C9_AURAN3.610e-2081.48Tr-type G domain-containing protein (Fragment) n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..73
e-value: 1.2E-7
score: 33.4
NoneNo IPR availablePANTHERPTHR43721FAMILY NOT NAMEDcoord: 1..64
IPR039263GTP-binding protein 1PANTHERPTHR43721:SF9GTP-BINDING PROTEIN 1coord: 1..64
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig109249contigH-elongata_contig109249:222..847 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig109249.747.1mRNA_H-elongata_contig109249.747.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig109249 222..862 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig109249.747.1 ID=prot_H-elongata_contig109249.747.1|Name=mRNA_H-elongata_contig109249.747.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=79bp
MIGNVDSGKSTLIGVLSSAGLDDGRGAARSLVLRHRHEQENGRTSAVTME
IMGYGKDGEQVQDRGTSGLIFIVRLVQLR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039263GTPB1
IPR027417P-loop_NTPase