prot_H-elongata_contig109113.737.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig109113.737.1
Unique Nameprot_H-elongata_contig109113.737.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length85
Homology
BLAST of mRNA_H-elongata_contig109113.737.1 vs. uniprot
Match: D7FWD2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD2_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 1.390e-29
Identity = 54/74 (72.97%), Postives = 67/74 (90.54%), Query Frame = 0
Query:    6 TAGSKSLQTYDIVAAVPCCQRSFELLCCQSDVDVISMPLGRRLPISIKKKNVDAALARGAVFEITYSQAIQSKT 79
            TAGS++LQ+YD+VAAVPCCQRSFE+LC  SDVDVIS+P G+RLP +I KKN DAAL+RGAVFE++YSQAIQ+ +
Sbjct:  123 TAGSEALQSYDVVAAVPCCQRSFEVLCKDSDVDVISLPSGKRLPFNINKKNTDAALSRGAVFEVSYSQAIQNSS 196          
BLAST of mRNA_H-elongata_contig109113.737.1 vs. uniprot
Match: A0A7S2SF94_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SF94_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 2.010e-10
Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 0
Query:   10 KSLQTYDIVAAVPCCQRSFELLCCQSDVDVISMPLGRRLPISIKKKNVDAALARGAVFEITYSQAIQ 76
            K  +TY++VA  P  QR++EL C Q  VDV+S+   +RL   I +K VDAAL +GA FE+ Y QA++
Sbjct:   46 KIAETYNVVAIQPTSQRTWELACEQHGVDVVSLDCTQRLRFHITRKQVDAALEKGAKFELLYGQAMK 112          
BLAST of mRNA_H-elongata_contig109113.737.1 vs. uniprot
Match: A0A7S2WPG3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPG3_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 3.890e-10
Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 0
Query:   10 KSLQTYDIVAAVPCCQRSFELLCCQSDVDVISMPLGRRLPISIKKKNVDAALARGAVFEITYSQAIQ 76
            K  +TY++VA  P  QR++EL C Q  VDV+S+   +RL   I +K VDAAL +GA FE+ Y QA++
Sbjct:  119 KIAETYNVVAIQPTSQRTWELACEQHGVDVVSLDCTQRLRFHITRKQVDAALEKGAKFELLYGQAMK 185          
BLAST of mRNA_H-elongata_contig109113.737.1 vs. uniprot
Match: A0A8H4CZK5_9ASCO (Uncharacterized protein n=2 Tax=[Candida] haemuloni TaxID=45357 RepID=A0A8H4CZK5_9ASCO)

HSP 1 Score: 56.6 bits (135), Expect = 1.810e-7
Identity = 26/69 (37.68%), Postives = 40/69 (57.97%), Query Frame = 0
Query:   15 YDIVAAVPCCQRSFELLCCQSDVDVISMPLGRRLPISIKKKNVDAALARGAVFEITYSQAIQSKTRGES 83
            +D++A  P  +++ +L     D+D++S+P+G RLP  IK K V  AL +G  FEI YS  I      E+
Sbjct:  106 FDLIAVQPSTEKALQLTTTNLDIDIVSLPMGTRLPFFIKHKTVGQALEKGMKFEICYSGLISGPASYET 174          
BLAST of mRNA_H-elongata_contig109113.737.1 vs. uniprot
Match: A0A835LMY9_9MAGN (Uncharacterized protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835LMY9_9MAGN)

HSP 1 Score: 55.1 bits (131), Expect = 3.650e-7
Identity = 27/64 (42.19%), Postives = 41/64 (64.06%), Query Frame = 0
Query:   12 LQTYDIVAAVPCCQRSFELLCCQSDVDVISMPLGRRLPISIKKKNVDAALARGAVFEITYSQAI 75
            L+TYD+VAA P  Q +F+ +C  ++VD+I+M   + +P  IK   + A + RG  FEITYS  +
Sbjct:  129 LKTYDLVAARPLNQPTFDHVCKYAEVDIIAMDFSQWVPFRIKYPILQAVIKRGIYFEITYSSLL 192          
BLAST of mRNA_H-elongata_contig109113.737.1 vs. uniprot
Match: A0A7S2N5Q4_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2N5Q4_9DINO)

HSP 1 Score: 53.1 bits (126), Expect = 4.490e-7
Identity = 25/62 (40.32%), Postives = 42/62 (67.74%), Query Frame = 0
Query:   15 YDIVAAVPCCQRSFELLCCQSDVDVISMPLGRRLPISIKKKNVDAALARGAVFEITYSQAIQ 76
            Y++ AA P    ++  +C +S+ DVIS+PL  +L   I++K+VDA L RG +FEI ++ A++
Sbjct:   14 YNVFAARPLTADAWRAVCERSEFDVISLPLHDKLLFPIRRKDVDALLQRGCIFEIEFAPALR 75          
BLAST of mRNA_H-elongata_contig109113.737.1 vs. uniprot
Match: A0A2P7YGW2_9ASCO (Uncharacterized protein n=3 Tax=Metschnikowiaceae incertae sedis TaxID=2937349 RepID=A0A2P7YGW2_9ASCO)

HSP 1 Score: 53.5 bits (127), Expect = 2.160e-6
Identity = 24/68 (35.29%), Postives = 38/68 (55.88%), Query Frame = 0
Query:   15 YDIVAAVPCCQRSFELLCCQSDVDVISMPLGRRLPISIKKKNVDAALARGAVFEITYSQAIQSKTRGE 82
            +D++   P  +++ +L     D+D++S+P+G RLP  IK K V  AL +G  FEI Y   I    + E
Sbjct:   85 FDLIGVQPTTEKALQLTTANLDIDIVSLPMGTRLPFFIKHKTVGQALEKGMKFEICYLGLISGPAQYE 152          
BLAST of mRNA_H-elongata_contig109113.737.1 vs. uniprot
Match: A0A7S3CLF9_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidium rassoulzadegani TaxID=1082188 RepID=A0A7S3CLF9_9SPIT)

HSP 1 Score: 50.4 bits (119), Expect = 1.480e-5
Identity = 21/48 (43.75%), Postives = 32/48 (66.67%), Query Frame = 0
Query:   28 FELLCCQSDVDVISMPLGRRLPISIKKKNVDAALARGAVFEITYSQAI 75
            FE +C ++D D++S+  G R P   +K ++  ALARGAV E+ Y QA+
Sbjct:   85 FEQVCVKTDCDIVSVDCGERSPFFFQKSHIKQALARGAVIELNYGQAL 132          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109113.737.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FWD2_ECTSI1.390e-2972.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2SF94_9STRA2.010e-1047.76Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2WPG3_9STRA3.890e-1047.76Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A8H4CZK5_9ASCO1.810e-737.68Uncharacterized protein n=2 Tax=[Candida] haemulon... [more]
A0A835LMY9_9MAGN3.650e-742.19Uncharacterized protein n=1 Tax=Coptis chinensis T... [more]
A0A7S2N5Q4_9DINO4.490e-740.32Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]
A0A2P7YGW2_9ASCO2.160e-635.29Uncharacterized protein n=3 Tax=Metschnikowiaceae ... [more]
A0A7S3CLF9_9SPIT1.480e-543.75Hypothetical protein (Fragment) n=1 Tax=Strombidiu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.20.20.140coord: 1..84
e-value: 6.3E-12
score: 47.3
IPR002738RNase P subunit p30PFAMPF01876RNase_P_p30coord: 6..79
e-value: 4.5E-18
score: 65.5
IPR002738RNase P subunit p30PANTHERPTHR13031RIBONUCLEASE P SUBUNIT P30coord: 7..78
IPR016195Polymerase/histidinol phosphatase-likeSUPERFAMILY89550PHP domain-likecoord: 13..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig109113contigH-elongata_contig109113:1062..2071 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig109113.737.1mRNA_H-elongata_contig109113.737.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig109113 1062..2071 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig109113.737.1 ID=prot_H-elongata_contig109113.737.1|Name=mRNA_H-elongata_contig109113.737.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=85bp
MNRRQTAGSKSLQTYDIVAAVPCCQRSFELLCCQSDVDVISMPLGRRLPI
SIKKKNVDAALARGAVFEITYSQAIQSKTRGESR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002738RNase_P_p30
IPR016195Pol/histidinol_Pase-like