prot_H-elongata_contig10910.735.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10910.735.1
Unique Nameprot_H-elongata_contig10910.735.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length313
Homology
BLAST of mRNA_H-elongata_contig10910.735.1 vs. uniprot
Match: D7FJJ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJJ5_ECTSI)

HSP 1 Score: 305 bits (780), Expect = 1.850e-92
Identity = 173/311 (55.63%), Postives = 208/311 (66.88%), Query Frame = 0
Query:    1 ASQASATDLRLWSSYVQLLTILGDRDEAIKIAEKALSLVQALPESKKRMSAEMFWVAFRLHAGLPLTPRDLHVGEDSPPHAHPGAGAALGSLFERGENGGGKRDQALLMLCSFAEGRFVRPKKKANNIKKKLKRDGKASTSGGSDGSDGSAAISPPRLMAARRLMADRVARLAEEELPREDGISSLPHGLLDMTPSFMYHSIAWVWLEYLTRGPDEAEKAMAACLTMVKIKINNEAQTGDSEDDGGRSPGGDESR--LRGAASGYTPYTWDVVPGDTALGVCLERMHRSFSEVAVMAQRYDSATTGPRRVR 309
            ASQASATDLRLWSSYVQLL +LG   EAIK+AEKALS+VQALPE KK  SAE+FW+ FRLHAGLPL+PRD H GED            +G+LFE G  G   R+ ALLMLCSFAEG F RPK K+    K+ KRDGK S++        S  I+PPRL+AAR+LMADRVAR A +E+ R+     +  G LDMTP FMYH+IAWVW+E+L+ G D AE AM+ CL + +        TG  E  G  +     S   + G ++G  PY W+VVP  TALGVCLERMHR FSE+  +AQRY+    GPRRVR
Sbjct:  517 ASQASATDLRLWSSYVQLLALLGSTQEAIKVAEKALSMVQALPEDKKGFSAELFWLTFRLHAGLPLSPRDPHPGEDD---------ETVGNLFETGNKGRHGREMALLMLCSFAEGGFKRPKSKS----KRSKRDGKGSSAE-------SILITPPRLLAARKLMADRVAREAAQEVQRD-----VADGALDMTPPFMYHAIAWVWMEFLSVGLDAAEDAMSKCLGLAQPSTT---PTGSGEASGVAAESSSSSNFGIGGTSTGNKPYIWNVVPEHTALGVCLERMHRGFSELMTLAQRYNPVDAGPRRVR 799          
BLAST of mRNA_H-elongata_contig10910.735.1 vs. uniprot
Match: A0A6H5JC63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC63_9PHAE)

HSP 1 Score: 292 bits (747), Expect = 4.150e-86
Identity = 165/312 (52.88%), Postives = 203/312 (65.06%), Query Frame = 0
Query:    1 ASQASATDLRLWSSYVQLLTILGDRDEAIKIAEKALSLVQALPESKKRMSAEMFWVAFRLHAGLPLTPRDLHVGEDSPPHAHPGAGAALGSLFERGENGGGKRDQALLMLCSFAEGRFVRPKKKANNIKKKLKRDGKASTSGGSDGSDGSAAISPPRLMAARRLMADRVARLAEEELPREDGISSLPHGLLDMTPSFMYHSIAWVWLEYLTRGPDEAEKAMAACLTMVK---IKINNEAQTGDSEDDGGRSPGGDESRLRGAASGYTPYTWDVVPGDTALGVCLERMHRSFSEVAVMAQRYDSATTGPRRVR 309
            ASQASATDLRLWSSYVQLL +LG   EAIK+AEKALS+VQALPE KK  SAE+FW+ FRLHAGLPL+PRD H GED            +G+LFE G  G   R+ ALLMLCSFAEG F RPK K+    K+ KRDGK S++           I+PPRL+AAR+LMADRVAR A +E+ R+  ++    G LDMTP FMYH+IAWVW+E+++ G   A+ AM+ CL + +                          +  + G ++G  PYTW+VVP  TALGVCLERMHR FSE+  +AQRY+    GPRRVR
Sbjct: 1057 ASQASATDLRLWSSYVQLLALLGSTQEAIKVAEKALSMVQALPEDKKGFSAELFWLTFRLHAGLPLSPRDPHPGEDD---------ETVGNLFETGNKGRNGREMALLMLCSFAEGGFKRPKSKS----KRSKRDGKGSSAE-------PILITPPRLLAARKLMADRVAREAAQEVQRDADVAD---GALDMTPPFMYHAIAWVWMEFISVGLGAAQDAMSKCLELAQPSXXXXXXXXXXXXXXXXXXXXXXXXKFGIGGTSTGNKPYTWNVVPEHTALGVCLERMHRGFSELMTLAQRYNPVDAGPRRVR 1345          
BLAST of mRNA_H-elongata_contig10910.735.1 vs. uniprot
Match: A0A835ZIY3_9STRA (NRDE-2, necessary for RNA interference-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIY3_9STRA)

HSP 1 Score: 111 bits (277), Expect = 2.120e-23
Identity = 98/314 (31.21%), Postives = 134/314 (42.68%), Query Frame = 0
Query:    1 ASQASATDLRLWSSYVQLLTILGDRDEAIKIAEKALSLVQALPESKKRMSAEMFWVAFRLHAGLPLTPRDLHVGEDSP---PHAHPGAGAALGSLFE--RGENGGGKRDQALLMLCSFAEGRFVRPKKKANNIKKKLKRDGKASTSGGSDGSDGSAAISPPRLMAARRLMADRVARLAEEELPREDGISSLPHGLLDMTPSFMYHSIAWVWLEYLTRGPDEAEKAMAACLTMVKIKINNEAQTGDSEDDGGRSPGGDESRLRGAASGYTPYTWDVVPGDTALGVCLERMHRSFSEVAVMAQRYDSATTGPRRVR 309
            AS+ASATDLRLW +YV+L   LG    A++ A +AL+ V+ALP +++R +  +FW AFRL AGLPL+              P A  G+ A+ G + E       G  RD AL +L S AEG + +P   A     +                         RL+ ARRL A+ + R  E E  R           LD TP F Y++ A  WL+  T G   A  AM + L  + +         D+     R+P      ++G      PY W +     A  V  ER H +  E    A     A   PR  R
Sbjct: 1221 ASEASATDLRLWCAYVELEDALGAPATALRAARRALASVEALPPAQRRHAPALFWAAFRLTAGLPLSAAXXXXXXXXXXXTPQAPAGSNASGGCVAELCSPTGSGAARDAALHLLLSMAEGSYEKPPAVAAAAALQXXXXXXXXXXXXX--------XXXXRLVRARRLFAEHLTR--EAEALRSAXXXXXXXXGLDATPPFFYYAAALTWLQLATDGALAAAAAMQSALLQLLVGQTPANAPQDAPAAAARTPTSRSPHVQGLG----PYEWQLASDAGARAVAAERCHLALCEALAAAAAAGDAAA-PRAER 1519          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10910.735.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FJJ5_ECTSI1.850e-9255.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JC63_9PHAE4.150e-8652.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZIY3_9STRA2.120e-2331.21NRDE-2, necessary for RNA interference-domain-cont... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10910contigH-elongata_contig10910:455..2662 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10910.735.1mRNA_H-elongata_contig10910.735.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10910 455..2662 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10910.735.1 ID=prot_H-elongata_contig10910.735.1|Name=mRNA_H-elongata_contig10910.735.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=313bp
ASQASATDLRLWSSYVQLLTILGDRDEAIKIAEKALSLVQALPESKKRMS
AEMFWVAFRLHAGLPLTPRDLHVGEDSPPHAHPGAGAALGSLFERGENGG
GKRDQALLMLCSFAEGRFVRPKKKANNIKKKLKRDGKASTSGGSDGSDGS
AAISPPRLMAARRLMADRVARLAEEELPREDGISSLPHGLLDMTPSFMYH
SIAWVWLEYLTRGPDEAEKAMAACLTMVKIKINNEAQTGDSEDDGGRSPG
GDESRLRGAASGYTPYTWDVVPGDTALGVCLERMHRSFSEVAVMAQRYDS
ATTGPRRVRPWV*
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