prot_H-elongata_contig108858.717.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig108858.717.1
Unique Nameprot_H-elongata_contig108858.717.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length45
Homology
BLAST of mRNA_H-elongata_contig108858.717.1 vs. uniprot
Match: D7FK88_ECTSI (SANT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK88_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 1.220e-14
Identity = 34/46 (73.91%), Postives = 42/46 (91.30%), Query Frame = 0
Query:    1 LSLH-QVFDKVAQEVEGKTVGEVVEFYYMWKKTHHYKLWKSMWRAE 45
            +S+H +VF KVA+E+EGKTV +VVEFYYMWKKT+HYK WKSM+RAE
Sbjct:  468 ISVHGKVFHKVAEEIEGKTVADVVEFYYMWKKTNHYKQWKSMFRAE 513          
BLAST of mRNA_H-elongata_contig108858.717.1 vs. uniprot
Match: A0A6H5KPS5_9PHAE (SANT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPS5_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 7.940e-14
Identity = 32/46 (69.57%), Postives = 42/46 (91.30%), Query Frame = 0
Query:    1 LSLH-QVFDKVAQEVEGKTVGEVVEFYYMWKKTHHYKLWKSMWRAE 45
            +S+H +VF KVA+E++GKTV +VVEFYYMWKKT+HYK WK+M+RAE
Sbjct:  667 ISVHGKVFHKVAEEIDGKTVADVVEFYYMWKKTNHYKQWKAMFRAE 712          
BLAST of mRNA_H-elongata_contig108858.717.1 vs. uniprot
Match: B8CAX2_THAPS (MYB DNA binding protein/ transcription factor-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAX2_THAPS)

HSP 1 Score: 53.5 bits (127), Expect = 2.000e-8
Identity = 23/46 (50.00%), Postives = 35/46 (76.09%), Query Frame = 0
Query:    1 LSLH-QVFDKVAQEVEGKTVGEVVEFYYMWKKTHHYKLWKSMWRAE 45
            ++LH ++F +V + V+ K+  E+VEFYY+WKKT HY+ WKS + AE
Sbjct:   13 MALHGKIFHQVQKWVKTKSTKEIVEFYYIWKKTSHYRRWKSQYEAE 58          
BLAST of mRNA_H-elongata_contig108858.717.1 vs. uniprot
Match: A0A7S2R001_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R001_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 5.750e-7
Identity = 20/38 (52.63%), Postives = 28/38 (73.68%), Query Frame = 0
Query:    3 LHQVFDKVAQEVEGKTVGEVVEFYYMWKKTHHYKLWKS 40
            L + F +V + +  K+  E+VEFYY+WKKTHHYK+WK 
Sbjct:   83 LGKQFHRVQKLIRTKSTKEIVEFYYIWKKTHHYKMWKK 120          
BLAST of mRNA_H-elongata_contig108858.717.1 vs. uniprot
Match: A0A1Z5JP76_FISSO (SANT domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JP76_FISSO)

HSP 1 Score: 52.4 bits (124), Expect = 6.060e-7
Identity = 21/34 (61.76%), Postives = 24/34 (70.59%), Query Frame = 0
Query:    7 FDKVAQEVEGKTVGEVVEFYYMWKKTHHYKLWKS 40
            F+KV  E+  KT  EV+EFYYMWKKT HY  WK 
Sbjct:  133 FEKVQSEIGSKTTKEVIEFYYMWKKTSHYSSWKK 166          
BLAST of mRNA_H-elongata_contig108858.717.1 vs. uniprot
Match: A0A6U0ZH30_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0ZH30_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 1.590e-6
Identity = 23/39 (58.97%), Postives = 27/39 (69.23%), Query Frame = 0
Query:    7 FDKVAQEVEGKTVGEVVEFYYMWKKTHHYKLWKSMWRAE 45
            F KV + VE KT  EVVEFYY+WKKT HY  WK ++  E
Sbjct:  145 FHKVQRAVESKTTKEVVEFYYVWKKTAHYDHWKRIYEPE 183          
BLAST of mRNA_H-elongata_contig108858.717.1 vs. uniprot
Match: A0A7S4RT22_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RT22_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 4.060e-6
Identity = 22/46 (47.83%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    1 LSLH-QVFDKVAQEVEGKTVGEVVEFYYMWKKTHHYKLWKSMWRAE 45
            LSL+ +VF KV + V  KT  E++EFYY+WKK+ HY+ WK  +  +
Sbjct:  189 LSLYGKVFHKVQKIVRSKTTKEIIEFYYIWKKSSHYRRWKGQYEVD 234          
BLAST of mRNA_H-elongata_contig108858.717.1 vs. uniprot
Match: A0A7S1UJW4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJW4_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 5.640e-6
Identity = 19/39 (48.72%), Postives = 28/39 (71.79%), Query Frame = 0
Query:    7 FDKVAQEVEGKTVGEVVEFYYMWKKTHHYKLWKSMWRAE 45
            F  V ++V+ K+  +++EFYY+WKKT HYKLWK  +  E
Sbjct:  155 FHAVQKDVQTKSTKDIIEFYYLWKKTSHYKLWKRSYENE 193          
BLAST of mRNA_H-elongata_contig108858.717.1 vs. uniprot
Match: A0A7S0KBC3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KBC3_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 2.090e-5
Identity = 21/41 (51.22%), Postives = 27/41 (65.85%), Query Frame = 0
Query:    5 QVFDKVAQEVEGKTVGEVVEFYYMWKKTHHYKLWKSMWRAE 45
            +VF  V + V+ K+  E+VEFYY+WKKT HYK WK     E
Sbjct:  320 KVFHSVQKVVKTKSTKEIVEFYYVWKKTSHYKRWKQQHEPE 360          
BLAST of mRNA_H-elongata_contig108858.717.1 vs. uniprot
Match: A0A0K3APW2_BABMR (SANT domain-containing protein n=1 Tax=Babesia microti (strain RI) TaxID=1133968 RepID=A0A0K3APW2_BABMR)

HSP 1 Score: 47.8 bits (112), Expect = 5.370e-5
Identity = 20/39 (51.28%), Postives = 28/39 (71.79%), Query Frame = 0
Query:    3 LHQVFDKVAQEVEGKTVGEVVEFYYMWKKTHHYKLWKSM 41
            L + F K+ Q +  K+VGE+V+FYY+WKKT  Y LWK +
Sbjct:  325 LGKEFYKLHQLIPTKSVGEIVDFYYIWKKTRRYHLWKQV 363          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig108858.717.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D7FK88_ECTSI1.220e-1473.91SANT domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KPS5_9PHAE7.940e-1469.57SANT domain-containing protein n=1 Tax=Ectocarpus ... [more]
B8CAX2_THAPS2.000e-850.00MYB DNA binding protein/ transcription factor-like... [more]
A0A7S2R001_9STRA5.750e-752.63Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A1Z5JP76_FISSO6.060e-761.76SANT domain-containing protein n=2 Tax=Fistulifera... [more]
A0A6U0ZH30_9STRA1.590e-658.97Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4RT22_9STRA4.060e-647.83Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S1UJW4_9STRA5.640e-648.72Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S0KBC3_9STRA2.090e-551.22Hypothetical protein n=1 Tax=Leptocylindrus aporus... [more]
A0A0K3APW2_BABMR5.370e-551.28SANT domain-containing protein n=1 Tax=Babesia mic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.60coord: 2..45
e-value: 2.6E-11
score: 45.2
IPR017884SANT domainPROSITEPS51293SANTcoord: 1..34
score: 12.183
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 7..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig108858contigH-elongata_contig108858:1080..1214 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig108858.717.1mRNA_H-elongata_contig108858.717.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig108858 1080..1214 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig108858.717.1 ID=prot_H-elongata_contig108858.717.1|Name=mRNA_H-elongata_contig108858.717.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=45bp
LSLHQVFDKVAQEVEGKTVGEVVEFYYMWKKTHHYKLWKSMWRAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017884SANT_dom
IPR009057Homeobox-like_sf