prot_H-elongata_contig108594.700.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig108594.700.1
Unique Nameprot_H-elongata_contig108594.700.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length137
Homology
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BLAST of mRNA_H-elongata_contig108594.700.1 vs. uniprot
Match: D8LK26_ECTSI (Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK26_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 2.250e-40
Identity = 125/135 (92.59%), Postives = 132/135 (97.78%), Query Frame = 0 
Query:    1 SRSGR-KPRPGGVHAHVAAYEGDLTKLRRYVQAGGDLEKRDSYRATPLLLASEKGHEACVAFLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGRVPKRLSSRKEISNLLAAKETESKV 134
            SR+GR KPRPGGVHAHVAAYEGDL KLRRY +AGGDLEKRDSYRATPLLLA+EKGHEACVA+LLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGR+PKRL+SRKEISNLLAAKETESK+
Sbjct:   54 SRTGRSKPRPGGVHAHVAAYEGDLGKLRRYSEAGGDLEKRDSYRATPLLLAAEKGHEACVAYLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGRIPKRLASRKEISNLLAAKETESKL 188
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BLAST of mRNA_H-elongata_contig108594.700.1 vs. uniprot
Match: D8LK98_ECTSI (Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK98_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 4.420e-6
Identity = 23/48 (47.92%), Postives = 31/48 (64.58%), Query Frame = 0 
Query:   12 VHAHVAAYEGDLTKLRRYVQAGGDLEKRDSYRATPLLLASEKGHEACV 59
            +H H AAY G    L+ Y+  GGDLE RD ++AT L+L +E+GH   V
Sbjct:  817 IHVHTAAYNGKQDVLKAYISQGGDLEIRDQFQATALMLCAERGHTQMV 864
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig108594.700.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LK26_ECTSI2.250e-4092.59Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK26... [more]
D8LK98_ECTSI4.420e-647.92Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 42..71
e-value: 6.4E-4
score: 29.0
coord: 75..104
e-value: 3.7E-4
score: 29.8
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 75..107
score: 13.117
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 42..74
score: 11.728
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 15..104
e-value: 1.6E-12
score: 47.8
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 9..112
score: 30.184
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 2..130
e-value: 4.0E-31
score: 109.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 15..124
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 8..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig108594contigH-elongata_contig108594:488..2117 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig108594.700.1mRNA_H-elongata_contig108594.700.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig108594 488..2117 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig108594.700.1 ID=prot_H-elongata_contig108594.700.1|Name=mRNA_H-elongata_contig108594.700.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=137bp
SRSGRKPRPGGVHAHVAAYEGDLTKLRRYVQAGGDLEKRDSYRATPLLLA
SEKGHEACVAFLLDAGADITARDEHDYTALHLAAFYGRVVVVSLLLSRGA
DTSAVDDRGRVPKRLSSRKEISNLLAAKETESKVRSD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf