prot_H-elongata_contig10848.689.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10848.689.1
Unique Nameprot_H-elongata_contig10848.689.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length196
Homology
BLAST of mRNA_H-elongata_contig10848.689.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM)

HSP 1 Score: 107 bits (267), Expect = 1.720e-23
Identity = 59/169 (34.91%), Postives = 85/169 (50.30%), Query Frame = 0
Query:    7 AILGWEVRQLNVDMVYLEANVEEEIYIELPEGYRDSKKQVDLLKEAMYGLVNAGLFWSKRFRTELKAKGFERFQADPCVLRRVLREKVVXXXXXXXXXLLVASATKRDEEQVLKDLHSCFPIKDLGEVSFYLGYYISRDRDAGKLRLNHHQYLQTLAEHFEITKTSAIP 175
            AI  WE+RQ+++   YL   +EEEI++E PEG+ D   +V  LK  +YGL  AG  W+K+   +L   GF R  ADPCV       K+          +L   +  R +  V   L   F +KDLGE    LG  I R+R    + ++   Y+ T+ E F  +K + IP
Sbjct:  956 AIKDWEMRQIDIKGAYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVYYNNQDGKITILTVWVDDIILCGDSESRIDTTV-SALKKIFEVKDLGEPKLLLGIQIIRNRKLKTITISQRNYINTILERFNYSKINPIP 1123          
BLAST of mRNA_H-elongata_contig10848.689.1 vs. uniprot
Match: A0A6H5JXU1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXU1_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 2.230e-21
Identity = 56/167 (33.53%), Postives = 91/167 (54.49%), Query Frame = 0
Query:   11 WEVRQLNVDMVYLEANVEEEIYIELPEGYRDSKKQVDLLKEAMYGLVNAGLFWSKRFRTELKAKGFERFQADPCVLRRVLREKVVXXXXXXXXXLLVASATKRDEEQVLKDLHSCFPIKDLGEVSFYLGYYISRDRDAGKLRLNHHQYLQTLAEHFEITKTSAIPPA 177
            W+V+Q      Y+ A + EEIY+  PEG      +V  ++ A+YGL  +G  W       L   G+E+ + DPCV R+V+  +VV         +LVA A + D E++   L+  FP+KDLGE ++Y G  I  D + G  +L+   Y++++ + F++T  + IP A
Sbjct:   44 WDVKQ-----AYIHAKLREEIYLSFPEGCSSMSGKVVKIERALYGLKQSGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVA-ADEGDREELFASLNKKFPVKDLGECTWYDGCAIVMDVENGITKLSQTAYIESMLKRFDVTTIAFIPAA 204          
BLAST of mRNA_H-elongata_contig10848.689.1 vs. uniprot
Match: A0A6A3BK41_HIBSY (Cytochrome P450 71A9-like n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3BK41_HIBSY)

HSP 1 Score: 101 bits (251), Expect = 2.330e-21
Identity = 68/194 (35.05%), Postives = 108/194 (55.67%), Query Frame = 0
Query:    3 LGIIAILGWEVRQLNVDMVYLEANVEEEIYIELPEGYRDS--KKQVDLLKEAMYGLVNAGLFWSKRFRTELKAKGFERFQADPCVLRRVLREKVVXXXXXXXXXLLVASATKRDEEQVLKDLHSCFPIKDLGEVSFYLGYYISRDRDAGKLRLNHHQYLQTLAEHF---EITKTSAIPPAARGKPLSKADGPQT 191
            L ++A L  E+ QL+V   +L  ++EEEIY+  PEGY+D+  +K V  L +++YGL  +   W KRF + ++ K + R + D CV  + L++            +L+ S ++++ +++   L+  F +KDLGE    LG  ISRDR  GKL L   QY++ + + F   E TK  +IP A   K LS    P+T
Sbjct:  756 LALVAQLNLELAQLDVKTTFLHDDLEEEIYMTQPEGYKDNGCEKWVWKLNKSLYGLKQSPRQWYKRFDSFMRRKKYTRSKYDHCVYLQKLKDGSFIYLVLYVDDMLITSKSQKEIDKLKTQLNQKFEMKDLGEAKKILGMEISRDRQRGKLCLTQKQYMRKVLQCFGMNENTKHVSIPQAFHLK-LSSQLSPKT 948          
BLAST of mRNA_H-elongata_contig10848.689.1 vs. uniprot
Match: A0A6A3BMZ9_HIBSY (Putative LRR receptor-like serine/threonine-protein kinase n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3BMZ9_HIBSY)

HSP 1 Score: 101 bits (251), Expect = 2.460e-21
Identity = 64/185 (34.59%), Postives = 105/185 (56.76%), Query Frame = 0
Query:    3 LGIIAILGWEVRQLNVDMVYLEANVEEEIYIELPEGYRDS--KKQVDLLKEAMYGLVNAGLFWSKRFRTELKAKGFERFQADPCVLRRVLREKVVXXXXXXXXXLLVASATKRDEEQVLKDLHSCFPIKDLGEVSFYLGYYISRDRDAGKLRLNHHQYLQTLAEHF---EITKTSAIPPAARGKP 182
            L ++A L  E+ QL+V M +L  ++EEEIY+  PEGY+D   +K V  L +++YGL  +   W KRF + ++ + + R + + CV  + L++            +L+AS ++++ +++   L+  F +KDL E    LG  ISRDR  GKL L   QYL+ + + F   E TK  +IP A++  P
Sbjct:  620 LALVAQLNLELAQLDVKMAFLHGDLEEEIYMTQPEGYKDGGCEKCVCKLNKSLYGLKQSSRQWYKRFDSFMRRQKYTRSKYEHCVYLQKLKDGSFIYILLYVDDMLIASKSQKEIDKLKAQLNQEFEMKDLDEAKKILGMEISRDRQRGKLCLTQKQYLRNVLQCFGMNENTKHVSIPLASQLSP 804          
BLAST of mRNA_H-elongata_contig10848.689.1 vs. uniprot
Match: A0A6H5JMA7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA7_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 2.520e-21
Identity = 55/168 (32.74%), Postives = 92/168 (54.76%), Query Frame = 0
Query:   11 WEVRQLNVDMVYLEANVEEEIYIELPEGYRDSKKQVDLLKEAMYGLVNAGLFWSKRFRTELKAKGFERFQADPCVLRRVLREKVVXXXXXXXXXLLVASATKRDEEQVLKDLHSCFPIKDLGEVSFYLGYYISRDRDAGKLRLNHHQYLQTLAEHFEITKTSAIPPAA 178
            W+V+Q      Y+ A ++E +Y+  PEG      +V  ++ A+YGL  +G  W       L   G+E+ + DPCV R+V+  +VV         +LVA A + + E+    L+  FP+KDLGE ++Y GY I+ D +    RL+   Y++++ + F++T T+  P AA
Sbjct:   90 WDVKQ-----AYIHAKLKEGLYLRFPEGCGSMSGKVVKVERALYGLKQSGHEWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVA-ADEGEREEFFASLNKKFPVKDLGECTWYDGYAIAMDIENDITRLSQTAYIESILKRFDVTTTAFTPAAA 251          
BLAST of mRNA_H-elongata_contig10848.689.1 vs. uniprot
Match: A0A6A2YR99_HIBSY (DEAD-box ATP-dependent RNA helicase 24 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2YR99_HIBSY)

HSP 1 Score: 100 bits (249), Expect = 4.480e-21
Identity = 67/194 (34.54%), Postives = 108/194 (55.67%), Query Frame = 0
Query:    3 LGIIAILGWEVRQLNVDMVYLEANVEEEIYIELPEGYRDS--KKQVDLLKEAMYGLVNAGLFWSKRFRTELKAKGFERFQADPCVLRRVLREKVVXXXXXXXXXLLVASATKRDEEQVLKDLHSCFPIKDLGEVSFYLGYYISRDRDAGKLRLNHHQYLQTLAEHF---EITKTSAIPPAARGKPLSKADGPQT 191
            L ++  L  E+ QL++   +L  ++EEEIY+  PEGY+D   +K V  L +++YGL  +   W KRF + ++ + + R + D CV  + L++            +L+AS ++++ +++   L+  F +KDLGE    LG  ISRDR  GKL L   QYL+ + + F   E TK  +IP A+  K LS    P+T
Sbjct:  743 LALVVQLNLELAQLDIKTTFLHGDLEEEIYMTQPEGYKDGGCEKWVCKLNKSLYGLKQSPRQWYKRFDSFMRRQKYTRSKYDYCVYLQKLKDGSFIYLLLYVDDMLIASKSQKEIDKLKAQLNQEFEMKDLGEARKILGMEISRDRQRGKLYLTQKQYLRKVLQCFGMNENTKHVSIPLASHLK-LSSQLSPKT 935          
BLAST of mRNA_H-elongata_contig10848.689.1 vs. uniprot
Match: A0A401GVA6_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GVA6_9APHY)

HSP 1 Score: 95.5 bits (236), Expect = 5.770e-21
Identity = 52/173 (30.06%), Postives = 93/173 (53.76%), Query Frame = 0
Query:    2 VLGIIAILGWEVRQLNVDMVYLEANVEEEIYIELPEGYRDSKKQVDLLKEAMYGLVNAGLFWSKRFRTELKAKGFERFQADPCVLRRVLREKVVXXXXXXXXXLLVASATKRDEEQVLKDLHSCFPIKDLGEVSFYLGYYISRDRDAGKLRLNHHQYLQTLAEHFEITKTSAI 174
            +LG+ AIL WE+ Q++V   YL   ++EE+Y++ PEGY D    V  LK+ +YGL  +G  W+     +L   GF+R  +DPC   ++  +K+          LL+ +      +Q+  +L + F + DLGE    +G  I RDR    ++++  +Y++++     +T T+ +
Sbjct:   19 ILGLAAILDWEIGQMDVKGAYLNGTLKEEVYMQQPEGYSDGTYCVCKLKKTLYGLKQSGREWNIMLNRKLLDAGFKRLFSDPCAYIQIKGDKI-EIVTIWVDDLLIFTDDCALMDQLKSELRNMFEVTDLGEPWKIVGIEIERDRSKRTIKISQTKYIESILHKNGLTNTNTV 190          
BLAST of mRNA_H-elongata_contig10848.689.1 vs. uniprot
Match: A0A6H5KDR1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDR1_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 8.040e-21
Identity = 52/164 (31.71%), Postives = 95/164 (57.93%), Query Frame = 0
Query:   12 EVRQLNVDMVYLEANVEEEIYIELPEGYRDSKKQVDLLKEAMYGLVNAGLFWSKRFRTELKAKGFERFQADPCVLRRVLREKVVXXXXXXXXXLLVASATKRDEEQVLKDLHSCFPIKDLGEVSFYLGYYISRDRDAGKLRLNHHQYLQTLAEHFEITKTSAIP 175
            E+  L+++  ++++ ++ E++++LP G      +V  L +++YGL  A   +  R  ++LK  GFE+  +DPCVLR ++ ++V+         +L A + K   E V+  L    P K+LGEV F+LG  + RDR+AG + ++   Y +++ E F +  TS+IP
Sbjct:  282 ELLHLDIEQAFVQSKLDHEVFMKLPPGCGTMSGKVVRLNKSLYGLKQASRTFYMRLVSDLKRIGFEQSLSDPCVLRFMMGDEVMGMVAIHVDDILYAGS-KSFAETVVAALGDSLPTKNLGEVKFFLGCALRRDREAGTIEISQESYRRSVLERFNVVSTSSIP 444          
BLAST of mRNA_H-elongata_contig10848.689.1 vs. uniprot
Match: A0A6H5K738_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K738_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 8.100e-21
Identity = 52/168 (30.95%), Postives = 91/168 (54.17%), Query Frame = 0
Query:   10 GWEVRQLNVDMVYLEANVEEEIYIELPEGYRDSKKQVDLLKEAMYGLVNAGLFWSKRFRTELKAKGFERFQADPCVLRRVLREKVVXXXXXXXXXLLVASATKRDEEQVLKDLHSCFPIKDLGEVSFYLGYYISRDRDAGKLRLNHHQYLQTLAEHFEITKTSAIPPA 177
            G ++   +V+  Y+ A ++EEIY+  PEG      +V  ++ A+YG   +G  W       L   G+E+ + DPCV R+V+  +VV         + VA A + + E +   L+  FP+KDLGE ++Y G  I+ D + G  +L+   Y++++ + F++T T+  P A
Sbjct:   38 GKKLAHWDVNQAYIHAKLKEEIYLRFPEGCGSMSGKVVKVERALYGPKQSGREWGFEAADALVENGYEQCRVDPCVFRKVVDREVVGLIVIYVDDIFVA-ADEGEREVLFASLNKKFPVKDLGECTWYDGCAIAMDVENGITKLSQTAYIESMLKRFDVTTTTFTPAA 204          
BLAST of mRNA_H-elongata_contig10848.689.1 vs. uniprot
Match: A0A6A2WCJ0_HIBSY (Cytochrome P450 71A9-like n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WCJ0_HIBSY)

HSP 1 Score: 99.8 bits (247), Expect = 8.120e-21
Identity = 58/172 (33.72%), Postives = 99/172 (57.56%), Query Frame = 0
Query:    3 LGIIAILGWEVRQLNVDMVYLEANVEEEIYIELPEGYRDS--KKQVDLLKEAMYGLVNAGLFWSKRFRTELKAKGFERFQADPCVLRRVLREKVVXXXXXXXXXLLVASATKRDEEQVLKDLHSCFPIKDLGEVSFYLGYYISRDRDAGKLRLNHHQYLQTLAEHFEITKTS 172
            L ++A L  E+ QL+V M +L  ++EEEIY+  PEGY+D   +K V  L +++YGL  +   W  RF + ++ + + R + D CV  + L++            +L+AS ++++ +++   L+  F +KDLGE +  LG  ISRDR  GKL L   QYL+ + + F + + +
Sbjct:  650 LALVAQLNLELAQLDVKMTFLHGDLEEEIYMTQPEGYKDGGCEKWVCKLNKSLYGLKQSPRQWYNRFDSFMRRQKYTRSKYDHCVYLQKLKDGSFIYLLLYVDDMLIASKSQKEIDKLNAQLNQEFEMKDLGEANKILGMKISRDRQRGKLCLTQKQYLRKILQCFGMNENT 821          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10848.689.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0C3AKI0_9AGAM1.720e-2334.91Uncharacterized protein (Fragment) n=1 Tax=Serendi... [more]
A0A6H5JXU1_9PHAE2.230e-2133.53Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A3BK41_HIBSY2.330e-2135.05Cytochrome P450 71A9-like n=1 Tax=Hibiscus syriacu... [more]
A0A6A3BMZ9_HIBSY2.460e-2134.59Putative LRR receptor-like serine/threonine-protei... [more]
A0A6H5JMA7_9PHAE2.520e-2132.74Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A2YR99_HIBSY4.480e-2134.54DEAD-box ATP-dependent RNA helicase 24 n=1 Tax=Hib... [more]
A0A401GVA6_9APHY5.770e-2130.06Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KDR1_9PHAE8.040e-2131.71Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K738_9PHAE8.100e-2130.95Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A2WCJ0_HIBSY8.120e-2133.72Cytochrome P450 71A9-like n=1 Tax=Hibiscus syriacu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 3..172
e-value: 4.1E-32
score: 111.7
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 54..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10848contigH-elongata_contig10848:6136..6723 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10848.689.1mRNA_H-elongata_contig10848.689.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10848 5467..6729 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10848.689.1 ID=prot_H-elongata_contig10848.689.1|Name=mRNA_H-elongata_contig10848.689.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=196bp
MVLGIIAILGWEVRQLNVDMVYLEANVEEEIYIELPEGYRDSKKQVDLLK
EAMYGLVNAGLFWSKRFRTELKAKGFERFQADPCVLRRVLREKVVVIIVV
YVDDLLVASATKRDEEQVLKDLHSCFPIKDLGEVSFYLGYYISRDRDAGK
LRLNHHQYLQTLAEHFEITKTSAIPPAARGKPLSKADGPQTSADA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2