prot_H-elongata_contig108420.687.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig108420.687.1
Unique Nameprot_H-elongata_contig108420.687.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length71
Homology
BLAST of mRNA_H-elongata_contig108420.687.1 vs. uniprot
Match: A0A6H5LB76_9PHAE (PKD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LB76_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 9.000e-8
Identity = 24/30 (80.00%), Postives = 26/30 (86.67%), Query Frame = 0
Query:    1 VYTIPCDYARGTFSYHPHDHGSTALQTGGG 30
            VYTIPCD+A GTF YHPH HGST+LQ GGG
Sbjct:  750 VYTIPCDHAGGTFWYHPHHHGSTSLQMGGG 779          
BLAST of mRNA_H-elongata_contig108420.687.1 vs. uniprot
Match: A0A836CK08_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK08_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 1.100e-6
Identity = 23/30 (76.67%), Postives = 24/30 (80.00%), Query Frame = 0
Query:    1 VYTIPCDYARGTFSYHPHDHGSTALQTGGG 30
             YTIPCD+A GT  YHPH HGS ALQTGGG
Sbjct:  645 TYTIPCDHASGTNWYHPHHHGSVALQTGGG 674          
BLAST of mRNA_H-elongata_contig108420.687.1 vs. uniprot
Match: A0A835YUJ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUJ5_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 2.040e-6
Identity = 22/30 (73.33%), Postives = 24/30 (80.00%), Query Frame = 0
Query:    1 VYTIPCDYARGTFSYHPHDHGSTALQTGGG 30
             YTIPC++A GTF YHPH HGSTALQ  GG
Sbjct:  413 TYTIPCEHASGTFWYHPHGHGSTALQADGG 442          
BLAST of mRNA_H-elongata_contig108420.687.1 vs. uniprot
Match: A0A835ZAX7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAX7_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 2.510e-5
Identity = 20/30 (66.67%), Postives = 25/30 (83.33%), Query Frame = 0
Query:    1 VYTIPCDYARGTFSYHPHDHGSTALQTGGG 30
             YT+PCD++ GT  YHPH+HGS+ALQT GG
Sbjct:  368 TYTLPCDHSSGTNWYHPHNHGSSALQTTGG 397          
BLAST of mRNA_H-elongata_contig108420.687.1 vs. uniprot
Match: A0A7S2J6U1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2J6U1_9EUKA)

HSP 1 Score: 49.3 bits (116), Expect = 4.650e-5
Identity = 20/30 (66.67%), Postives = 23/30 (76.67%), Query Frame = 0
Query:    1 VYTIPCDYARGTFSYHPHDHGSTALQTGGG 30
             Y IP D+  GTF YHPH HGSTA+Q+GGG
Sbjct:  157 TYVIPADHMGGTFWYHPHHHGSTAIQSGGG 186          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig108420.687.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5LB76_9PHAE9.000e-880.00PKD domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CK08_9STRA1.100e-676.67Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YUJ5_9STRA2.040e-673.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZAX7_9STRA2.510e-566.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2J6U1_9EUKA4.650e-566.67Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig108420contigH-elongata_contig108420:1285..1846 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig108420.687.1mRNA_H-elongata_contig108420.687.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig108420 1285..1879 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig108420.687.1 ID=prot_H-elongata_contig108420.687.1|Name=mRNA_H-elongata_contig108420.687.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bp
VYTIPCDYARGTFSYHPHDHGSTALQTGGGDVSGADQGRSTCDRRRAFQH
HLHLEVTSTCGDKVDGLDRP*
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