prot_H-elongata_contig108389.684.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig108389.684.1
Unique Name	prot_H-elongata_contig108389.684.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	87

Homology

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BLAST of mRNA_H-elongata_contig108389.684.1 vs. uniprot
Match: D7G2U5_ECTSI (Autophagy-related protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2U5_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 8.980e-56
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0

Query:    1 VICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 86
            VICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG
Sbjct:   30 VICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 115

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BLAST of mRNA_H-elongata_contig108389.684.1 vs. uniprot
Match: K3W768_GLOUD (Autophagy-related protein n=5 Tax=Oomycota TaxID=4762 RepID=K3W768_GLOUD)

HSP 1 Score: 154 bits (389), Expect = 5.050e-47
Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 0

Query:    1 VICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 86
            VICEKADRSDIPDIDKKKYLVPADL+ GQF+YVIRKRIKL PEKAIFIF+N+ +P T+ALMS +YE QKD DGFLYITYSGENTFG
Sbjct:   21 VICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDVDGFLYITYSGENTFG 106

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BLAST of mRNA_H-elongata_contig108389.684.1 vs. uniprot
Match: ATG8_PHYIN (Autophagy-related protein 8 n=19 Tax=Peronosporaceae TaxID=4777 RepID=ATG8_PHYIN)

HSP 1 Score: 154 bits (389), Expect = 6.470e-47
Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 0

Query:    1 VICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 86
            VICEKADRSDIPDIDKKKYLVPADL+ GQF+YVIRKRIKL PEKAIFIF+N+ +P T+ALMS +YE QKD DGFLYITYSGENTFG
Sbjct:   30 VICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDVDGFLYITYSGENTFG 115

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BLAST of mRNA_H-elongata_contig108389.684.1 vs. uniprot
Match: A0A485LSI6_9STRA (Autophagy-related protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LSI6_9STRA)

HSP 1 Score: 153 bits (387), Expect = 1.480e-46
Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = 0

Query:    1 VICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 86
            VICEKADRS+IPDIDKKKYLVPADL+ GQF+YVIRKRIKL PEKAIFIF+N+ +P T+ALMS +YE QKD DGFLYITYSGENTFG
Sbjct:   29 VICEKADRSEIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDSDGFLYITYSGENTFG 114

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BLAST of mRNA_H-elongata_contig108389.684.1 vs. uniprot
Match: A0A0P1A6U3_PLAHL (Autophagy-related protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6U3_PLAHL)

HSP 1 Score: 154 bits (389), Expect = 1.920e-46
Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 0

Query:    1 VICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 86
            VICEKADRSDIPDIDKKKYLVPADL+ GQF+YVIRKRIKL PEKAIFIF+N+ +P T+ALMS +YE QKD DGFLYITYSGENTFG
Sbjct:   57 VICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDVDGFLYITYSGENTFG 142

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BLAST of mRNA_H-elongata_contig108389.684.1 vs. uniprot
Match: A0A024FXQ2_9STRA (Autophagy-related protein n=4 Tax=Albugo candida TaxID=65357 RepID=A0A024FXQ2_9STRA)

HSP 1 Score: 154 bits (390), Expect = 2.210e-46
Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 0

Query:    1 VICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 86
            VICEKADRSDIPDIDKKKYLVPADL+ GQF+YVIRKRIKL PEKAIFIF+N+ +P T+ALMS +YE QKD DGFLYITYSGENTFG
Sbjct:   78 VICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDADGFLYITYSGENTFG 163

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BLAST of mRNA_H-elongata_contig108389.684.1 vs. uniprot
Match: A0A397C7Z1_9STRA (Autophagy-related protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C7Z1_9STRA)

HSP 1 Score: 153 bits (387), Expect = 3.020e-46
Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = 0

Query:    1 VICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 86
            VICEKADRS+IPDIDKKKYLVPADL+ GQF+YVIRKRIKL PEKAIFIF+N+ +P T+ALMS +YE QKD DGFLYITYSGENTFG
Sbjct:   49 VICEKADRSEIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDSDGFLYITYSGENTFG 134

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BLAST of mRNA_H-elongata_contig108389.684.1 vs. uniprot
Match: M4BR17_HYAAE (Autophagy-related protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BR17_HYAAE)

HSP 1 Score: 154 bits (389), Expect = 3.770e-46
Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 0

Query:    1 VICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 86
            VICEKADRSDIPDIDKKKYLVPADL+ GQF+YVIRKRIKL PEKAIFIF+N+ +P T+ALMS +YE QKD DGFLYITYSGENTFG
Sbjct:   87 VICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDVDGFLYITYSGENTFG 172

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BLAST of mRNA_H-elongata_contig108389.684.1 vs. uniprot
Match: A0A024TY39_9STRA (Autophagy-related protein n=17 Tax=Oomycota TaxID=4762 RepID=A0A024TY39_9STRA)

HSP 1 Score: 152 bits (384), Expect = 4.790e-46
Identity = 70/86 (81.40%), Postives = 79/86 (91.86%), Query Frame = 0

Query:    1 VICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 86
            VICEKADRS+IPDIDKKKYLVPADL+ GQF+YVIRKRIKL PEKAIFIF+N+ +P T++LMS +YE QKD DGFLYITYSGENTFG
Sbjct:   30 VICEKADRSEIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTASLMSNIYEEQKDSDGFLYITYSGENTFG 115

[Close]

BLAST of mRNA_H-elongata_contig108389.684.1 vs. uniprot
Match: A0A7S3ZPI7_9STRA (Autophagy-related protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPI7_9STRA)

HSP 1 Score: 152 bits (383), Expect = 4.990e-46
Identity = 72/86 (83.72%), Postives = 80/86 (93.02%), Query Frame = 0

Query:    1 VICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 86
            VICE+ADRSD+PDIDKKKYLVPADL+ GQFIYVIRKRIKL PEKAIFIFV++ IP T++LMS VYE QKDEDGFLY+TYSGENTFG
Sbjct:   29 VICERADRSDVPDIDKKKYLVPADLTVGQFIYVIRKRIKLPPEKAIFIFVDNVIPPTASLMSAVYEVQKDEDGFLYVTYSGENTFG 114

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig108389.684.1 vs. uniprot

BLAST of mRNA_H-elongata_contig108389.684.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G2U5_ECTSI	8.980e-56	100.00	Autophagy-related protein n=2 Tax=Ectocarpus TaxID...	[more]
K3W768_GLOUD	5.050e-47	83.72	Autophagy-related protein n=5 Tax=Oomycota TaxID=4...	[more]
ATG8_PHYIN	6.470e-47	83.72	Autophagy-related protein 8 n=19 Tax=Peronosporace...	[more]
A0A485LSI6_9STRA	1.480e-46	82.56	Autophagy-related protein n=1 Tax=Aphanomyces stel...	[more]
A0A0P1A6U3_PLAHL	1.920e-46	83.72	Autophagy-related protein n=1 Tax=Plasmopara halst...	[more]
A0A024FXQ2_9STRA	2.210e-46	83.72	Autophagy-related protein n=4 Tax=Albugo candida T...	[more]
A0A397C7Z1_9STRA	3.020e-46	82.56	Autophagy-related protein n=5 Tax=Aphanomyces asta...	[more]
M4BR17_HYAAE	3.770e-46	83.72	Autophagy-related protein n=1 Tax=Hyaloperonospora...	[more]
A0A024TY39_9STRA	4.790e-46	81.40	Autophagy-related protein n=17 Tax=Oomycota TaxID=...	[more]
A0A7S3ZPI7_9STRA	4.990e-46	83.72	Autophagy-related protein n=1 Tax=Pelagomonas calc...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004241	Autophagy protein Atg8 ubiquitin-like	PFAM	PF02991	Atg8	coord: 1..86 e-value: 2.7E-41 score: 140.0
IPR004241	Autophagy protein Atg8 ubiquitin-like	PANTHER	PTHR10969	MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED	coord: 1..86
None	No IPR available	GENE3D	3.10.20.90		coord: 1..86 e-value: 1.3E-43 score: 149.8
None	No IPR available	PANTHER	PTHR10969:SF65	AUTOPHAGY-RELATED PROTEIN 8C	coord: 1..86
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 1..86

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig108389	contig	H-elongata_contig108389:51..2139 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig108389.684.1	mRNA_H-elongata_contig108389.684.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig108389 51..2139 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig108389.684.1 ID=prot_H-elongata_contig108389.684.1|Name=mRNA_H-elongata_contig108389.684.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp
VICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFV
NDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004241	Atg8-like
IPR029071	Ubiquitin-like_domsf