prot_H-elongata_contig108373.682.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig108373.682.1
Unique Nameprot_H-elongata_contig108373.682.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length93
Homology
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BLAST of mRNA_H-elongata_contig108373.682.1 vs. uniprot
Match: D7G7L6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7L6_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 3.510e-11
Identity = 39/90 (43.33%), Postives = 57/90 (63.33%), Query Frame = 0 
Query:    4 ADNRPLNAGGGTESSWVPPSEFPPGHDDFPTAKSMTTED-EKETVSKKHVDPVGESAGSGGTGR--TEYMQALGPLKIRDEADPFSVDKG 90
            +++RPL  GG  + +WVPPSEFPPG +D P ++    +   K+  ++  VD  G+   S G     +EYM ALG +K+R+EADPFS+D G
Sbjct: 1020 SEDRPLTGGG--KGAWVPPSEFPPGQEDGPVSRGDGGDALVKKASAESVVDAPGQGNDSAGDEAVSSEYMTALGFVKVREEADPFSMDLG 1107
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BLAST of mRNA_H-elongata_contig108373.682.1 vs. uniprot
Match: A0A6H5L4T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4T0_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 6.570e-11
Identity = 41/94 (43.62%), Postives = 55/94 (58.51%), Query Frame = 0 
Query:    4 ADNRPLNAGGGTESSWVPPSEFPPGHDDFPTAKSMTTEDEKETVSKKH-----VDPVGESAGSGGTGR--TEYMQALGPLKIRDEADPFSVDKG 90
            +++RPL  GG  + +WVPPSEFPPG +D P        D  + + KK      VD  G+   S G     +EYM ALG +K+R+EADPFS+D G
Sbjct:  659 SEDRPLTGGG--KGAWVPPSEFPPGEEDGPVGSG----DGGDVLVKKASAGSVVDAAGQEKDSAGDEAVSSEYMTALGFVKVREEADPFSMDLG 746
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig108373.682.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7L6_ECTSI3.510e-1143.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4T0_9PHAE6.570e-1143.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig108373contigH-elongata_contig108373:586..1155 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig108373.682.1mRNA_H-elongata_contig108373.682.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig108373 586..1155 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig108373.682.1 ID=prot_H-elongata_contig108373.682.1|Name=mRNA_H-elongata_contig108373.682.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=93bp
AENADNRPLNAGGGTESSWVPPSEFPPGHDDFPTAKSMTTEDEKETVSKK
HVDPVGESAGSGGTGRTEYMQALGPLKIRDEADPFSVDKGVTE
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