prot_H-elongata_contig108308.677.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig108308.677.1
Unique Nameprot_H-elongata_contig108308.677.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length612
Homology
BLAST of mRNA_H-elongata_contig108308.677.1 vs. uniprot
Match: A0A6H5KYV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYV9_9PHAE)

HSP 1 Score: 421 bits (1083), Expect = 1.800e-129
Identity = 329/565 (58.23%), Postives = 386/565 (68.32%), Query Frame = 0
Query:    2 RVTSERLSVAENHAEFMAEEAEAARRERRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEAANARAGGDYDVDERAKRRMRELESRLAASESAKDALSEELERLAGRGSLLGVERFAQASRLDALERESAKTREDLEARERDVVLLQEQKRALEAEALRARRALSRGALETASMARGELELQARAEEATDEARGLRAEVTRLTDELLVEEAKTVEARDEADRLAARLSHRGAGLEGLEAEVASLRAALTVARSEAAEREGLCARMEXEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLKASEEQARSALRDAELRVGQAAVEGDGARRDAEAAREEAGKLRRSLAELDADRDRLQDALDGQSETLAALQDGSELWRQRLTE----AEERLREEGSRGSDLEQALESAERRAG--EAERITAEKLRKAEALASALEVKTRQLXXXTEDLEAMAKENQAVTAELNRLGQARDEGRRELGDALHRRATSERAARAAQFEKEDVLNNYRGLHSEKTRLQGAVDELQLARGRLTKGLAERDAEVS 560
            R T+ERLS+ +   EF+AEEAE+A+          XXXXXXXXXXXXXXXX                GE ANAR   +  V++  + RM  L SRL ASE+A+DALSEELERLAG+GSLLGVE FAQ+SR+ ALERESA  + DL+AR++DV  L EQKR LE E  RA+RALSRGA+ETA++A+GEL LQAR EEATDE RGLRAEV RLTD LL EE K V ARDEADRLA RLSHR AG EGLE+E+AS RAAL VAR+E+ EREG+ ARME  XXXXXX                            XXXXXXXXXX          +ALRDAELRVGQA   GD A+R+AE+AR E  +L+ +L ELDADRDRLQD LD QSE +A L+     WR + +     A ER      RG  + ++  S  RR G  EA    AE L+K EAL+SALE KT QL   TEDLE MAKENQAVT+EL RL   RD+GRR+LGDA+H ++T+E+AARAAQFEKEDVL NYRGLH+EK RL+  +DELQL R RLTK LA RD+EVS
Sbjct:  396 RATTERLSIVQEQTEFLAEEAESAKAGEGVAAKRAXXXXXXXXXXXXXXXXLERALRAESRRALGAEGEVANAREA-ELAVED-LRERMERLRSRLEASEAARDALSEELERLAGQGSLLGVEHFAQSSRVGALERESAALKADLKARDKDVASLLEQKRTLEEEVSRAQRALSRGAVETATIAQGELALQARVEEATDEVRGLRAEVGRLTDALLAEERKAVAARDEADRLATRLSHRSAGFEGLESELASSRAALAVARAESTEREGMLARMEAXXXXXXXSMAALEQQVVVSREAISDKDDEVRRLKAXXXXXXXXXXXXXXXXXXXXAALRDAELRVGQALSAGDSAKREAESARAEVAQLKSALTELDADRDRLQDTLDKQSEKMAELRTDGARWRSQASRRGGGAPER------RGLKVLRSRTST-RRLGKEEASESAAESLQKTEALSSALEAKTGQLAAATEDLEMMAKENQAVTSELTRLVAERDDGRRKLGDAVHNQSTAEQAARAAQFEKEDVLKNYRGLHAEKRRLEAGIDELQLTRQRLTKSLAARDSEVS 951          
BLAST of mRNA_H-elongata_contig108308.677.1 vs. uniprot
Match: D8LTQ9_ECTSI (Basal body protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTQ9_ECTSI)

HSP 1 Score: 402 bits (1034), Expect = 2.990e-124
Identity = 324/557 (58.17%), Postives = 371/557 (66.61%), Query Frame = 0
Query:    1 ARVTSERLSVAENHAEFMAEEAEAARRERRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEAANARAGGDYDVDERAKRRMRELESRLAASESAKDALSEELERLAGRGSLLGVERFAQASRLDALERESAKTREDLEARERDVVLLQEQKRALEAEALRARRALSRGALETASMARGELELQARAEEATDEARGLRAEVTRLTDELLVEEAKTVEARDEADRLAARLSHRGAGLEGLEAEVASLRAALTVARSEAAEREGLCARMEXEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLKASEEQARSALRDAELRVGQAAVEGDGARRDAEAAREEAGKLRRSLAELDADRDRLQDALDGQSETLAALQDGSELWRQRLTEAEERLREEGSRGSDLEQALESAERRAGEAERITAEKLRKAEALASALEVKTRQLXXXTEDLEAMAKENQAVTAELNRLGQARDEGRRELGDALHRRATSERAARAAQFEKEDVLNNYRGLHSEKTRLQGAVDELQLARGRLTKGLAERDA 557
            +R T+ERLSV +   EF+AEEAE+A+       XXXXXXXXXXXXXXX                    GEAANAR   +  V++  + RM  L SRL ASE+A+DALSEELERLAG+GSLLGVE FAQ+SR+ ALERESA    DL+ARERDV  L EQKRALE E  RA+RALSRGA+ETA+MA+GEL LQAR EEATDE RGLRAEV RLTD LL EE KTV ARDEADRLA RLSHR AG EGLE+E+AS RAAL VAR+EA EREG+     X XXXXXXXXXXXXXX                      XXXXXXXX  K S ++  +ALRDAE+RVGQA   GD A+R+AEAAR E  +L+ +L ELDADRDRLQD LD QSE +A                                                 E L+K EAL+SALE KT QL   TEDLE MAKENQAVT+EL RL   RDEGRR+LGDALH ++T+E+AARAA+FEKEDVL NYRGLH+EK RL+  +DELQL R RLTK LA RD+
Sbjct:  501 SRATTERLSVVQEQTEFLAEEAESAKAGEGVAAXXXXXXXXXXXXXXXDAAALERALRAESRRALGAEGEAANAREA-ELAVED-LRERMERLRSRLEASEAARDALSEELERLAGQGSLLGVEHFAQSSRVGALERESAALTADLKARERDVAGLLEQKRALEEEVSRAQRALSRGAVETATMAQGELALQARVEEATDEVRGLRAEVGRLTDALLAEERKTVAARDEADRLATRLSHRSAGFEGLESELASSRAALAVARAEATEREGMXXXXXXXXXXXXXXXXXXXXXVVVSRETISDKDDEVRRLKALAXXXXXXXXXXKTSSDEVHAALRDAEIRVGQALSAGDSAKREAEAARAEVAQLKSALTELDADRDRLQDTLDKQSEKMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSAVESLQKTEALSSALEAKTGQLAAATEDLEMMAKENQAVTSELTRLVADRDEGRRKLGDALHNQSTAEQAARAAEFEKEDVLKNYRGLHAEKRRLEAGIDELQLTRQRLTKSLAGRDS 1055          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig108308.677.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KYV9_9PHAE1.800e-12958.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTQ9_ECTSI2.990e-12458.17Basal body protein n=1 Tax=Ectocarpus siliculosus ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 573..593
NoneNo IPR availableCOILSCoilCoilcoord: 447..488
NoneNo IPR availableCOILSCoilCoilcoord: 307..341
NoneNo IPR availableCOILSCoilCoilcoord: 8..70
NoneNo IPR availableCOILSCoilCoilcoord: 356..439
NoneNo IPR availableCOILSCoilCoilcoord: 188..215
NoneNo IPR availableCOILSCoilCoilcoord: 244..264
NoneNo IPR availableCOILSCoilCoilcoord: 272..299
NoneNo IPR availableCOILSCoilCoilcoord: 83..117
NoneNo IPR availableCOILSCoilCoilcoord: 132..173
NoneNo IPR availablePANTHERPTHR34491FAMILY NOT NAMEDcoord: 276..611

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig108308contigH-elongata_contig108308:3..2166 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig108308.677.1mRNA_H-elongata_contig108308.677.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig108308 3..2166 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig108308.677.1 ID=prot_H-elongata_contig108308.677.1|Name=mRNA_H-elongata_contig108308.677.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=612bp
ARVTSERLSVAENHAEFMAEEAEAARRERRVASQRAVTAEARAEEMEREA
IDLERALRAETRRAQGAEGEAANARAGGDYDVDERAKRRMRELESRLAAS
ESAKDALSEELERLAGRGSLLGVERFAQASRLDALERESAKTREDLEARE
RDVVLLQEQKRALEAEALRARRALSRGALETASMARGELELQARAEEATD
EARGLRAEVTRLTDELLVEEAKTVEARDEADRLAARLSHRGAGLEGLEAE
VASLRAALTVARSEAAEREGLCARMEAEAERARQSVAALERRASTSRDAV
SDKDGEISRLKALARQLEGSRETLKASEEQARSALRDAELRVGQAAVEGD
GARRDAEAAREEAGKLRRSLAELDADRDRLQDALDGQSETLAALQDGSEL
WRQRLTEAEERLREEGSRGSDLEQALESAERRAGEAERITAEKLRKAEAL
ASALEVKTRQLAEATEDLEAMAKENQAVTAELNRLGQARDEGRRELGDAL
HRRATSERAARAAQFEKEDVLNNYRGLHSEKTRLQGAVDELQLARGRLTK
GLAERDAEVSRLRASVTALEVELQRKTADLGAVQRQAENLSAQLLRGGRQ
VEALAAENRRLV
back to top