prot_H-elongata_contig108250.671.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig108250.671.1
Unique Name	prot_H-elongata_contig108250.671.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	147

Homology

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BLAST of mRNA_H-elongata_contig108250.671.1 vs. uniprot
Match: D7FWE2_ECTSI (WD40 repeat protein flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWE2_ECTSI)

HSP 1 Score: 204 bits (518), Expect = 5.220e-58
Identity = 126/137 (91.97%), Postives = 130/137 (94.89%), Query Frame = 0

Query:    1 MNQTLEGHEGSVVCVTWNAAYSKLTTCDENGLIIVWMLHKGLWFEEMINNRNKSAVRDMKWTSDGQKICIIYADGAVIVGSVDGNRLWGKELEFGLQNVVXXXXXXXXXXXXXXXXXXXXXXXXXXLRVMTLPKGAE 137
            MNQTLEGHEGSVVCVTWNA YSKLTTCDE GLIIVWMLHKGLWFEEMINNR+KSAVRDMKWTS+GQKICIIYADGAVIVGSVDGNRLWGKEL+ GLQN  XXXXXXXXXXXXXXXXXXXXXXXXXX R MTLP+GAE
Sbjct:   81 MNQTLEGHEGSVVCVTWNATYSKLTTCDEQGLIIVWMLHKGLWFEEMINNRHKSAVRDMKWTSNGQKICIIYADGAVIVGSVDGNRLWGKELDMGLQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAMTLPEGAE 217

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BLAST of mRNA_H-elongata_contig108250.671.1 vs. uniprot
Match: A0A7S3Y5Z0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5Z0_HETAK)

HSP 1 Score: 181 bits (459), Expect = 6.950e-56
Identity = 84/99 (84.85%), Postives = 87/99 (87.88%), Query Frame = 0

Query:    1 MNQTLEGHEGSVVCVTWNAAYSKLTTCDENGLIIVWMLHKGLWFEEMINNRNKSAVRDMKWTSDGQKICIIYADGAVIVGSVDGNRLWGKELEFGLQNV 99
            MNQTLEGH GSV CVTWNA Y KLTT D+NGLIIVWMLHKG+WFEEMINNRNKS V DMKWTSDGQKICIIY DGAVIVGSVDGNRLWGKEL+  L  V
Sbjct:    9 MNQTLEGHNGSVCCVTWNANYRKLTTSDQNGLIIVWMLHKGMWFEEMINNRNKSVVNDMKWTSDGQKICIIYEDGAVIVGSVDGNRLWGKELDINLSFV 107

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BLAST of mRNA_H-elongata_contig108250.671.1 vs. uniprot
Match: A0A7S2BR82_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BR82_9STRA)

HSP 1 Score: 179 bits (454), Expect = 3.630e-55
Identity = 81/96 (84.38%), Postives = 87/96 (90.62%), Query Frame = 0

Query:    1 MNQTLEGHEGSVVCVTWNAAYSKLTTCDENGLIIVWMLHKGLWFEEMINNRNKSAVRDMKWTSDGQKICIIYADGAVIVGSVDGNRLWGKELEFGL 96
            MNQTL+GH G VVCVTWNA Y KLTT DE+GLIIVWMLHKG+WFEEMINNRNKS V+DMKWT+DG KICI+YADGAVIVGSVDGNRLWGKELE  L
Sbjct:   61 MNQTLDGHHGKVVCVTWNALYRKLTTSDESGLIIVWMLHKGMWFEEMINNRNKSVVKDMKWTADGSKICIVYADGAVIVGSVDGNRLWGKELEMQL 156

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BLAST of mRNA_H-elongata_contig108250.671.1 vs. uniprot
Match: A0A7S0WI31_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WI31_9CHLO)

HSP 1 Score: 171 bits (433), Expect = 1.740e-51
Identity = 79/96 (82.29%), Postives = 83/96 (86.46%), Query Frame = 0

Query:    1 MNQTLEGHEGSVVCVTWNAAYSKLTTCDENGLIIVWMLHKGLWFEEMINNRNKSAVRDMKWTSDGQKICIIYADGAVIVGSVDGNRLWGKELEFGL 96
            MNQTLEGH GSV+ V WN  Y KLTT D+ GLIIVWMLHKG+WFEEMINNRNKS VRDMKWTSDGQKICI+Y DGAVIVGSVDGNRLWGKEL   L
Sbjct:   65 MNQTLEGHNGSVMVVNWNENYRKLTTSDQYGLIIVWMLHKGMWFEEMINNRNKSVVRDMKWTSDGQKICIVYEDGAVIVGSVDGNRLWGKELALSL 160

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BLAST of mRNA_H-elongata_contig108250.671.1 vs. uniprot
Match: A0A835YIA3_9STRA (WD40 repeat protein flagellar associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIA3_9STRA)

HSP 1 Score: 184 bits (467), Expect = 3.860e-51
Identity = 84/99 (84.85%), Postives = 91/99 (91.92%), Query Frame = 0

Query:    1 MNQTLEGHEGSVVCVTWNAAYSKLTTCDENGLIIVWMLHKGLWFEEMINNRNKSAVRDMKWTSDGQKICIIYADGAVIVGSVDGNRLWGKELEFGLQNV 99
            MNQTLEGH GSV+CVTWN+ YSKLTT DENGLIIVWMLHKG+W+EEMINNR KS VRDMKWTSDGQKICI+Y DGAVIVGSVDGNRLWGKEL+  LQ+V
Sbjct:   61 MNQTLEGHNGSVMCVTWNSNYSKLTTSDENGLIIVWMLHKGMWYEEMINNRGKSVVRDMKWTSDGQKICIVYEDGAVIVGSVDGNRLWGKELDIYLQHV 159

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BLAST of mRNA_H-elongata_contig108250.671.1 vs. uniprot
Match: A0A2J7ZHB6_9CHLO (WD repeat domain-containing protein (Fragment) n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZHB6_9CHLO)

HSP 1 Score: 170 bits (431), Expect = 4.460e-51
Identity = 77/92 (83.70%), Postives = 84/92 (91.30%), Query Frame = 0

Query:    1 MNQTLEGHEGSVVCVTWNAAYSKLTTCDENGLIIVWMLHKGLWFEEMINNRNKSAVRDMKWTSDGQKICIIYADGAVIVGSVDGNRLWGKEL 92
            +NQTLEGH G+VVCV WN A+ KLTT DE GLIIVWMLHKG+WFEEMINNRNKS V+DMKWTS+G+KICIIY DGAVIVGSVDGNRLWGKEL
Sbjct:   66 LNQTLEGHNGAVVCVCWNNAFQKLTTSDEFGLIIVWMLHKGMWFEEMINNRNKSVVKDMKWTSNGEKICIIYEDGAVIVGSVDGNRLWGKEL 157

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BLAST of mRNA_H-elongata_contig108250.671.1 vs. uniprot
Match: A0A7S0HEY4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HEY4_9EUKA)

HSP 1 Score: 171 bits (432), Expect = 7.280e-51
Identity = 79/99 (79.80%), Postives = 85/99 (85.86%), Query Frame = 0

Query:    1 MNQTLEGHEGSVVCVTWNAAYSKLTTCDENGLIIVWMLHKGLWFEEMINNRNKSAVRDMKWTSDGQKICIIYADGAVIVGSVDGNRLWGKELEFGLQNV 99
            MNQTLEGH GSV+CV WN  Y KLTT D+ GLIIVWMLHKG+WFEEMINNRNKS VR MKWT DGQ+ICIIY DGAVIVGSVDGNRLWGKEL+  L +V
Sbjct:   74 MNQTLEGHNGSVMCVCWNENYRKLTTSDQYGLIIVWMLHKGMWFEEMINNRNKSTVRGMKWTPDGQRICIIYEDGAVIVGSVDGNRLWGKELKMQLAHV 172

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BLAST of mRNA_H-elongata_contig108250.671.1 vs. uniprot
Match: A0A7S0LYC8_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LYC8_9CRYP)

HSP 1 Score: 172 bits (435), Expect = 1.230e-50
Identity = 78/99 (78.79%), Postives = 85/99 (85.86%), Query Frame = 0

Query:    1 MNQTLEGHEGSVVCVTWNAAYSKLTTCDENGLIIVWMLHKGLWFEEMINNRNKSAVRDMKWTSDGQKICIIYADGAVIVGSVDGNRLWGKELEFGLQNV 99
            MNQTLEGH   V+C  WN A+ KLTT DE+GLIIVWMLHKGLWFEEMINNRNKS VRDMKW +DGQKICI+Y DGAVIVGSVDGNRLWGK+L+  LQ V
Sbjct:   63 MNQTLEGHSEPVICAAWNEAFKKLTTSDESGLIIVWMLHKGLWFEEMINNRNKSVVRDMKWNADGQKICIVYEDGAVIVGSVDGNRLWGKDLKMQLQYV 161

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BLAST of mRNA_H-elongata_contig108250.671.1 vs. uniprot
Match: F0XVP7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVP7_AURAN)

HSP 1 Score: 181 bits (459), Expect = 4.600e-50
Identity = 83/99 (83.84%), Postives = 89/99 (89.90%), Query Frame = 0

Query:    1 MNQTLEGHEGSVVCVTWNAAYSKLTTCDENGLIIVWMLHKGLWFEEMINNRNKSAVRDMKWTSDGQKICIIYADGAVIVGSVDGNRLWGKELEFGLQNV 99
            MNQTLEGH GSV+CVTWNA Y KLTT D+NGLIIVWMLHKG+WFEEMINNRNKS VR MKWT+DGQKICI+Y DGAVIVGSVDGNRLWGK+L  GL NV
Sbjct:   87 MNQTLEGHHGSVMCVTWNANYRKLTTSDQNGLIIVWMLHKGVWFEEMINNRNKSVVRAMKWTADGQKICIVYEDGAVIVGSVDGNRLWGKDLTCGLTNV 185

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BLAST of mRNA_H-elongata_contig108250.671.1 vs. uniprot
Match: A0A8J2SMR2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SMR2_9STRA)

HSP 1 Score: 179 bits (454), Expect = 2.160e-49
Identity = 81/99 (81.82%), Postives = 89/99 (89.90%), Query Frame = 0

Query:    1 MNQTLEGHEGSVVCVTWNAAYSKLTTCDENGLIIVWMLHKGLWFEEMINNRNKSAVRDMKWTSDGQKICIIYADGAVIVGSVDGNRLWGKELEFGLQNV 99
            MNQTLEGH+G+VVC TWNA Y KLTT D+NGLIIVWMLHKG+WFEEMINNRN+S V+ MKWT DGQKICI+Y DGAVIVGSVDGNRLWGKE+E GL NV
Sbjct:   60 MNQTLEGHQGAVVCSTWNANYRKLTTSDQNGLIIVWMLHKGVWFEEMINNRNRSVVKAMKWTPDGQKICIVYEDGAVIVGSVDGNRLWGKEMETGLTNV 158

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig108250.671.1 vs. uniprot

BLAST of mRNA_H-elongata_contig108250.671.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FWE2_ECTSI	5.220e-58	91.97	WD40 repeat protein flagellar associated protein n...	[more]
A0A7S3Y5Z0_HETAK	6.950e-56	84.85	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A7S2BR82_9STRA	3.630e-55	84.38	Hypothetical protein (Fragment) n=1 Tax=Florenciel...	[more]
A0A7S0WI31_9CHLO	1.740e-51	82.29	Hypothetical protein (Fragment) n=1 Tax=Pyramimona...	[more]
A0A835YIA3_9STRA	3.860e-51	84.85	WD40 repeat protein flagellar associated protein n...	[more]
A0A2J7ZHB6_9CHLO	4.460e-51	83.70	WD repeat domain-containing protein (Fragment) n=1...	[more]
A0A7S0HEY4_9EUKA	7.280e-51	79.80	Hypothetical protein (Fragment) n=1 Tax=Phaeocysti...	[more]
A0A7S0LYC8_9CRYP	1.230e-50	78.79	Hypothetical protein (Fragment) n=1 Tax=Cryptomona...	[more]
F0XVP7_AURAN	4.600e-50	83.84	Uncharacterized protein n=1 Tax=Aureococcus anopha...	[more]
A0A8J2SMR2_9STRA	2.160e-49	81.82	Hypothetical protein n=1 Tax=Pelagomonas calceolat...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 1..145 e-value: 3.6E-17 score: 64.3
IPR011659	WD40-like Beta Propeller	PFAM	PF07676	PD40	coord: 100..115 e-value: 0.0012 score: 18.8
None	No IPR available	PANTHER	PTHR16517	TUBBY-RELATED	coord: 12..127
IPR017233	WD repeat protein 35	PANTHER	PTHR16517:SF1	WD REPEAT-CONTAINING PROTEIN 35	coord: 12..127
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 5..46 score: 8.808
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 5..36 score: 9.64
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 3..131

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig108250	contig	H-elongata_contig108250:158..1802 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig108250.671.1	mRNA_H-elongata_contig108250.671.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig108250 158..1826 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig108250.671.1 ID=prot_H-elongata_contig108250.671.1|Name=mRNA_H-elongata_contig108250.671.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=147bp
MNQTLEGHEGSVVCVTWNAAYSKLTTCDENGLIIVWMLHKGLWFEEMINN
RNKSAVRDMKWTSDGQKICIIYADGAVIVGSVDGNRLWGKELEFGLQNVV
WSPDGRRILFVTTGGQVLIYDAEGKRLRVMTLPKGAEAYSVDESDGT

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR011659	PD40
IPR017233	WDR35
IPR017986	WD40_repeat_dom
IPR001680	WD40_repeat
IPR036322	WD40_repeat_dom_sf