prot_H-elongata_contig108246.670.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig108246.670.1
Unique Name	prot_H-elongata_contig108246.670.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	44

Homology

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BLAST of mRNA_H-elongata_contig108246.670.1 vs. uniprot
Match: D8LNS4_ECTSI (BAX inhibitor motif-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNS4_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 8.260e-19
Identity = 39/44 (88.64%), Postives = 42/44 (95.45%), Query Frame = 0

Query:    1 GSLTAYAFRTNPKHELTQFGAGLYSAGNALAMFCLMKLLFFRRH 44
            GSLTAYAFRTNPKHELTQFGAGLYSAGNAL++FCLMK+ FFR H
Sbjct:  264 GSLTAYAFRTNPKHELTQFGAGLYSAGNALSLFCLMKIFFFRGH 307

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig108246.670.1 vs. uniprot

BLAST of mRNA_H-elongata_contig108246.670.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LNS4_ECTSI	8.260e-19	88.64	BAX inhibitor motif-containing protein n=2 Tax=Ect...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 21..40
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 41..44
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..20
None	No IPR available	TMHMM	TMhelix		coord: 19..41

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig108246	contig	H-elongata_contig108246:2..133 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig108246.670.1	mRNA_H-elongata_contig108246.670.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig108246 2..133 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig108246.670.1 ID=prot_H-elongata_contig108246.670.1|Name=mRNA_H-elongata_contig108246.670.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=44bp
GSLTAYAFRTNPKHELTQFGAGLYSAGNALAMFCLMKLLFFRRH