prot_H-elongata_contig108167.664.1 (polypeptide) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 129 bits (323), Expect = 2.310e-31 Identity = 84/249 (33.73%), Postives = 129/249 (51.81%), Query Frame = 0
Query: 1 MFLKVVDGEAEMVGVVHVDDILTRNREKATMDRFAAELGQKFKLKDMVDARYYMGCHITRNRKARELKINPHLYVEPMTTS-------SVPT-----LSNADEPRNLDKEEIRKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQYLLYKKDWAIKYG-GQSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGAISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLRQV 236
+F + +G + VVHVDDI + E+ D+F +L +K++ D R+Y GC R+ A LKI+ Y E + +P LS D+ EE+ +P+ E + LMW AT TR IA+ +RAV ++C +P H + + I+ Y++ D I + G L ME + + S R SVSG ++M G ISW+SR + T+++EYV+L++ +KEVLFLRQV
Sbjct: 107 VFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQD-----EEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQV 349
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Match: A0A6H5KR24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR24_9PHAE) HSP 1 Score: 126 bits (317), Expect = 2.680e-31 Identity = 83/249 (33.33%), Postives = 129/249 (51.81%), Query Frame = 0
Query: 1 MFLKVVDGEAEMVGVVHVDDILTRNREKATMDRFAAELGQKFKLKDMVDARYYMGCHITRNRKARELKINPHLYVEPMTTS-------SVPT-----LSNADEPRNLDKEEIRKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQYLLYKKDWAIKYG-GQSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGAISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLRQV 236
+F + +G + VVHVDDI + E+ D+F +L ++K++ D +Y GC R+ A LKI+ Y E + +P LS D+ EE+ +P+ E + LMW AT TR IA+ +RAV ++C +P H + + I+ Y++ D I + G L ME + + S R SVSG ++M G ISW+SR + T+++EYV+L++ +KEVLFLRQV
Sbjct: 6 VFRLIEEGRVVVTLVVHVDDIFSIGEEER-YDQFGRDLNTMVRVKNLGDLIWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGMKLSEFDQD-----EEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDSGITFRRGSIAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQV 248
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE) HSP 1 Score: 129 bits (323), Expect = 1.130e-30 Identity = 84/249 (33.73%), Postives = 129/249 (51.81%), Query Frame = 0
Query: 1 MFLKVVDGEAEMVGVVHVDDILTRNREKATMDRFAAELGQKFKLKDMVDARYYMGCHITRNRKARELKINPHLYVEPMTTS-------SVPT-----LSNADEPRNLDKEEIRKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQYLLYKKDWAIKYG-GQSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGAISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLRQV 236
+F + +G + VVHVDDI + E+ D+F +L +K++ D R+Y GC R+ A LKI+ Y E + +P LS D+ EE+ +P+ E + LMW AT TR IA+ +RAV ++C +P H + + I+ Y++ D I + G L ME + + S R SVSG ++M G ISW+SR + T+++EYV+L++ +KEVLFLRQV
Sbjct: 281 VFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQD-----EEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQV 523
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE) HSP 1 Score: 129 bits (323), Expect = 1.940e-30 Identity = 84/249 (33.73%), Postives = 129/249 (51.81%), Query Frame = 0
Query: 1 MFLKVVDGEAEMVGVVHVDDILTRNREKATMDRFAAELGQKFKLKDMVDARYYMGCHITRNRKARELKINPHLYVEPMTTS-------SVPT-----LSNADEPRNLDKEEIRKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQYLLYKKDWAIKYG-GQSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGAISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLRQV 236
+F + +G + VVHVDDI + E+ D+F +L +K++ D R+Y GC R+ A LKI+ Y E + +P LS D+ EE+ +P+ E + LMW AT TR IA+ +RAV ++C +P H + + I+ Y++ D I + G L ME + + S R SVSG ++M G ISW+SR + T+++EYV+L++ +KEVLFLRQV
Sbjct: 802 VFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQD-----EEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQV 1044
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Match: A0A6H5L0Z9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Z9_9PHAE) HSP 1 Score: 117 bits (293), Expect = 4.220e-27 Identity = 77/231 (33.33%), Postives = 119/231 (51.52%), Query Frame = 0
Query: 19 DDILTRNREKATMDRFAAELGQKFKLKDMVDARYYMGCHITRNRKARELKINPHLYVEPMTTS-------SVPT-----LSNADEPRNLDKEEIRKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQYLLYKKDWAIKYG-GQSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGAISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLRQV 236
DDI + E+ D+F +L +K++ D R+Y GC R+ A LKI+ Y E + +P LS D+ EE+ +P+ E + LMW AT TR IA+ +RAV ++C +P H + + I+ Y++ + I + G L ME + + S R SVSG ++M G ISW+SR + T+++EYV+L++ +KEVLFLRQV
Sbjct: 66 DDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQD-----EEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHCRAGLGILGYVVRTSELGITFRRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQV 290
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Match: A0A0A9Z683_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=3 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Z683_LYGHE) HSP 1 Score: 117 bits (293), Expect = 2.000e-26 Identity = 73/235 (31.06%), Postives = 130/235 (55.32%), Query Frame = 0
Query: 16 VHVDDILTRNREKATMDRFAAELGQKFKLKDMVDARYYMGCHITRNRKARELKINPHLYVE------------PMTTSSVPT--LSNADEPRNLD-KEEIRKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQYLLYKKDWAIKYGG-QSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGAISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLR 234
V VDD+L + +K ++L + FK+ D+ +A++ +G I+R+R+ +++ ++ Y++ P T P LS +P + D ++++ PY EAV L++ + + R IA + V +F NPGPAH V +I++Y+ DW ++Y G +S+E+ Y F S +D R SV+G V ++ G++SW ++ TA T+++EY+ LS A +E L+LR
Sbjct: 1032 VWVDDLLIFSDDKKLTQEVKSQLMKCFKMTDIGEAKFVLGFQISRDRERKKIWMDQRAYIDNVLIRFGMENCNPAATPLDPNIKLSKDQQPSSPDERKKMEAIPYQEAVGSLLFASQVCRPDIAFAVSLVSRFNSNPGPAHWAAVKRILRYMKGTSDWKLEYDGTKSSEI--TGYCDSDFASDVDERKSVTGYVFLMCDGSVSWGTKKQPTTALSTTEAEYMALSAATQEALWLR 1264
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Match: A0A6H5KD60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD60_9PHAE) HSP 1 Score: 112 bits (281), Expect = 2.590e-26 Identity = 72/206 (34.95%), Postives = 108/206 (52.43%), Query Frame = 0
Query: 44 LKDMVDARYYMGCHITRNRKARELKINPHLYVEPMTTSS---------VPT---LSNADEPRNLDKEEIRKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQYLLYKKDWAIKYG-GQSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGAISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLRQV 236
+K++ D R+Y GC R+ AR LKI+ Y + + P LS D+ EE+ +P+ E + LMW AT TR IA+ RAV ++C +P H + + I+ Y++ D I +G G L ME + + S R SVSG +M +G ISW+SR + T+++EYV+L++ +KEVLFLRQV
Sbjct: 4 VKNLGDLRWYSGCVYERDWDARILKISQQTYAQELGMDFGVEYGKEILFPVGLKLSEFDQD-----EEVVSWPFRELIGSLMWLATQTRPNIANAARAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFGRGSVAGLSMEVFADADYASKAADRRSVSGGFVMCGRGCISWFSRTQQCVTLSTTEAEYVSLADVMKEVLFLRQV 204
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Match: A0A151SYU6_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151SYU6_CAJCA) HSP 1 Score: 114 bits (286), Expect = 3.120e-26 Identity = 73/250 (29.20%), Postives = 131/250 (52.40%), Query Frame = 0
Query: 1 MFLKVVDGEAEMVGVVHVDDILTRNREKATMDRFAAELGQKFKLKDMVDARYYMGCHITRNRKARELKINPHLYVEPM-------TTSSVPT-------LSNADEPRN-LDKEEIRKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQYLLYKKDWAIKYGGQSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGAISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLRQ 235
+F+K + ++ +++VDD+L ++ + +DR +LG+ F +KDM A+ +G I R+R+ +L ++ Y++ + +V T LS P N +K ++ + PY AV LM+ TR YIA + V +F NPG H +V I++YL D + +GG L Y+ +D+R S SG ++ A GA++W SR+ T+++E++ ++EA KE+L+L++
Sbjct: 72 VFVKKFSNDDFIILLLYVDDMLIVRKDVSRIDRLKKKLGESFAMKDMGAAKQILGIRIIRDREKWKLWLSQEQYIKRVLQRFQIENAKAVSTPFATHFKLSVKQSPSNKAEKLDMERVPYASAVGSLMYAMVCTRPYIAHAVGTVSRFLSNPGREHWNSVKWILRYLHGTVDMKLCFGGDKPTL--VGYSDSDMAGDVDSRKSTSGYLIKFAGGAVAWQSRLQRCVTLSTTEAEFIAITEACKELLWLKK 319
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY) HSP 1 Score: 116 bits (290), Expect = 5.110e-26 Identity = 76/245 (31.02%), Postives = 130/245 (53.06%), Query Frame = 0
Query: 7 DGEAEMVGVVHVDDILTRNREKATMDRFAAELGQKFKLKDMVDARYYMGCHITRNRKARELKINPHLYVEPMTTS---------SVPT-----LSNADEPRNLDK-EEIRKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQYLLYKKDWAIKYGGQSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGAISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLRQV 236
+GE+ ++ VDD LT +D FA ++ Q+F++ D+ D + +G + R+R+AR + I+ Y++ + + S+P L N P + E++R PY EAV LM+ A TR I + A+ +F +NPG AH + ++++YL ++ + YG +N + Y+ + S + R S+SG V L GAISW S+ V A ++++EY+ L+ A KE ++LR V
Sbjct: 1216 EGESAIIVAASVDD-LTITGTSDLVDAFAVDIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRFNLDEAAPLSIPLQPGSPLGNHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDITFAVTALSQFMQNPGRAHWDALKRVLRYLKGSRELWLVYG--TNNEGLRGYSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIALTHATKEAIWLRYV 1457
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Match: A0A1Y1IVX6_KLENI (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IVX6_KLENI) HSP 1 Score: 115 bits (289), Expect = 6.560e-26 Identity = 72/245 (29.39%), Postives = 124/245 (50.61%), Query Frame = 0
Query: 1 MFLKVVDGEAEMVGVVHVDDILTRNREKATMDRFAAELGQKFKLKDMVDARYYMGCHITRNRKARELKINPHLY---------VEPMTTSSVPTLSNADEPRNLDKEEIRKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQYLLYKKDWAIKYGGQSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGAISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLRQV 236
+F V+DGE V VV VDDIL + + + + A L +KF ++D+ A Y++G +TR+R+AR +K+ +E S P S R D + K+PY E V L++ + TR IA + A+ ++ P H + + + +YL + + +GG + L Y + +D+R S +G V ++ GA SW SR+ A+ T ++EY++ + A KE L+L+++
Sbjct: 741 LFTGVIDGERVWV-VVWVDDILIAAKGEQRLAKVKAHLSEKFDVRDLGPAEYFLGMELTRDRRARTIKLTQKKLTKELLGRYGLEAAKARSTPLSSGEKLQREGDPLDTGKYPYSELVGSLLYLSVCTRPDIAQAVGALARYMAGPTEEHWRAALGVARYLSGTAELGVTFGGSAEPL--VGYADADYAGDVDSRRSTTGYVFLVYGGAASWSSRLQPTVAASTVEAEYMSAASAAKEALWLKKL 982 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig108167.664.1 ID=prot_H-elongata_contig108167.664.1|Name=mRNA_H-elongata_contig108167.664.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=236bpback to top |