prot_H-elongata_contig10807.659.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10807.659.1
Unique Nameprot_H-elongata_contig10807.659.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length81
Homology
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BLAST of mRNA_H-elongata_contig10807.659.1 vs. uniprot
Match: A0A6H5JAC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAC5_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 1.350e-15
Identity = 45/91 (49.45%), Postives = 50/91 (54.95%), Query Frame = 0 
Query:    1 MSADLSVVVSKPTKKGSPVS-----------SVDATEGDGDILPGEADAASTDPKTWLVLYCGANLIVEKAVASTCDKLKVAWRKEYFSSW 80
            MSADLSVV  K +  G P S           S D   G           A+ DP+TWLVLYCGAN  VEKAV + CD L V WRKEYFS+W
Sbjct:  241 MSADLSVVPGKASPPGVPRSGRVTAAASDMGSPDGVSGGXXXXXXXXXXAAWDPRTWLVLYCGANAKVEKAVETACDDLGVTWRKEYFSAW 331
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10807.659.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JAC5_9PHAE1.350e-1549.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10807contigH-elongata_contig10807:3191..4702 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10807.659.1mRNA_H-elongata_contig10807.659.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10807 2847..4798 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10807.659.1 ID=prot_H-elongata_contig10807.659.1|Name=mRNA_H-elongata_contig10807.659.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=81bp
MSADLSVVVSKPTKKGSPVSSVDATEGDGDILPGEADAASTDPKTWLVLY
CGANLIVEKAVASTCDKLKVAWRKEYFSSW*
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