prot_H-elongata_contig107718.634.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig107718.634.1
Unique Nameprot_H-elongata_contig107718.634.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length228
Homology
[Close]
BLAST of mRNA_H-elongata_contig107718.634.1 vs. uniprot
Match: D7G9I0_ECTSI (C2H2 zinc finger, ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I0_ECTSI)

HSP 1 Score: 242 bits (618), Expect = 5.060e-73
Identity = 131/232 (56.47%), Postives = 151/232 (65.09%), Query Frame = 0 
Query:   10 RYLLIECGLDPGRACPSRGRGEGRTALHWAARGGHEEICHLLLETPRPVEP--------GGSGSRGCNGDRACSYLCADVAATEGTTPFHWAAWGAHLSTCQLLLDRGADHRTVNAYGCNAAHWCGLSGDVEVCRWLARSVQEGGAGGLDWAKTNSQGHTICHKAALXXXXXXXXXXRRQTEV-----GVVPVRAWGLDDGGYTPAKVARLAGHIDLAEWLEGIAIGTATAD 228
            RYLL ECG+D G ACP+RGRGEGRT                 LETPRPV+         GG G+    G    +++  DV A EGTTP HWA WGAHL+TC+LL +RGADHR+VNAYGCN AHWCGLSGDV+VCRWL+R V+EGGAGGLDWAKTN            XXXXXXXXXX           GVVP RAW  D+GGYTP  VARLAGH+DLA+W+ G  +  +T D
Sbjct:  402 RYLLHECGVDAGGACPTRGRGEGRTXXXXXXXXXXXXXXXXXLETPRPVDAAAAVSVVGGGDGTLVSPGGER-TFVSPDVTAAEGTTPLHWACWGAHLATCRLLFERGADHRSVNAYGCNVAHWCGLSGDVDVCRWLSRRVEEGGAGGLDWAKTNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVVPRRAWERDEGGYTPEDVARLAGHVDLADWIAGAGVTPSTDD 632
[Close]
BLAST of mRNA_H-elongata_contig107718.634.1 vs. uniprot
Match: A0A6H5K2T6_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2T6_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 5.820e-53
Identity = 111/223 (49.78%), Postives = 127/223 (56.95%), Query Frame = 0 
Query:   32 GRTALHWAARGGHEEICH----------------LLLETPRPVEPGGSGSRGCNGDRAC-------SYLCADVAATEGTTPFHWAAWGAHLSTCQLLLDRGADHRTVNAYGCNAAHWCGLSGDVEVCRWLARSVQEGGAGGLDWAKTNSQGHTICHKAALXXXXXXXXXXRRQTEVGVV-----PVRAWGLDDGGYTPAKVARLAGHIDLAEWLEGIAIGTAT 226
            G + L WAA  G  E+C                 LLLETPRPV+   + S    GD               DV A EGTTP HWA WGAHL+TC+LL +RGADHR+VNAYGCN AHWCGLSGDV+VCRWL+R V+EGG GGLDWAKTN Q          XXXXXXXXX   QT          P RAW  D+GGYTP  VARLA        + G  + ++T
Sbjct:  371 GSSPLDWAAGEGRLEVCRTSLXXXXXXXXXXXXXLLLETPRPVDAAAAVSVVGGGDGTLVSPGXXXXXXXPDVTAAEGTTPLHWACWGAHLATCRLLFERGADHRSVNAYGCNVAHWCGLSGDVDVCRWLSRRVEEGGPGGLDWAKTNLQXXXXXXXXXXXXXXXXXXXLAEQTTSXXXXXXXGPRRAWEKDEGGYTPEDVARLAXXXXXXXXIAGAGVMSST 593
[Close]
BLAST of mRNA_H-elongata_contig107718.634.1 vs. uniprot
Match: A0A7R9TTM5_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TTM5_MICPS)

HSP 1 Score: 102 bits (253), Expect = 1.650e-22
Identity = 76/225 (33.78%), Postives = 99/225 (44.00%), Query Frame = 0 
Query:   12 LLIECGLDPGRACPSRG-RGEGRTALHWAARGGHEEICHLLL----ETPRPVEPGGSGSRGCNGDRA-------------CSYLCADVAATEGTTPFHWAAW-GAHLSTCQLLLDRGADHRTVNAYGCNAAHWCGLSGDVEVCRWLARSVQEGGAGGLDWAKTNSQGHTICHKAALXXXXXXXXXXRRQTEVGVVPVRAWGLDDGGYTPAKVARLAGHIDLAEWL 217
            L+ E G DP       G    G  ALHWAA  GH +I   L+    E PR  +      RG                    + + AD   T+GTTPF  A W G  ++   L+ D GAD   +N +GCNAA W  ++GDVE    LA         G+D    N  GH+  HKAA                +G+  +RA   D  G TPA++ARL G+ +LA WL
Sbjct:   49 LVNEDGWDPKSDVEGVGVDARGSCALHWAAGEGHVDIVRYLVDVVGEDPRRAQTK-RDRRGAXXXXXXXXXXXXXXXXTNAARVDADAPTTDGTTPFMLATWKGGSIAMRWLVDDAGADPTALNVFGCNAAQWAAMNGDVEALELLAEL-------GVDVGVLNRNGHSALHKAATKGRRGACEWLIDVAGLGLKHMRA---DADGNTPAEMARLEGYAELASWL 262
[Close]
BLAST of mRNA_H-elongata_contig107718.634.1 vs. uniprot
Match: C1N3W7_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N3W7_MICPC)

HSP 1 Score: 100 bits (249), Expect = 7.530e-21
Identity = 75/225 (33.33%), Postives = 98/225 (43.56%), Query Frame = 0 
Query:   12 LLIECGLDPGRACPSRG-RGEGRTALHWAARGGHEEICHLLL----ETPRPVEPGGSGSRGCNGDRA-------------CSYLCADVAATEGTTPFHWAAW-GAHLSTCQLLLDRGADHRTVNAYGCNAAHWCGLSGDVEVCRWLARSVQEGGAGGLDWAKTNSQGHTICHKAALXXXXXXXXXXRRQTEVGVVPVRAWGLDDGGYTPAKVARLAGHIDLAEWL 217
            L+ E G DP       G    G  ALHWAA  GH +I   L+    E PR  +      RG                    + + AD   T+GTTPF  A W G  ++   L+ D G D   +N +GCNAA W  ++GDVE    LA         G+D    N  GH+  HKAA                +G+  +RA   D  G TPA++ARL G+ +LA WL
Sbjct:  289 LVNEDGWDPKSDVEGVGVDARGSCALHWAAGEGHVDIVRYLVDVVGEDPRRAQTK-RDRRGAXXXXXXXXXXXXXXXXTNAARVDADAPTTDGTTPFMLATWKGGSIAMRWLVDDAGVDPTALNVFGCNAAQWAAMNGDVEALELLAEL-------GVDVGVLNRNGHSALHKAATKGRRGACEWLIDVAGLGLKHMRA---DADGNTPAEMARLEGYAELASWL 502
[Close]
BLAST of mRNA_H-elongata_contig107718.634.1 vs. uniprot
Match: A0A7S1X5V7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X5V7_9CHLO)

HSP 1 Score: 78.6 bits (192), Expect = 4.110e-15
Identity = 43/111 (38.74%), Postives = 54/111 (48.65%), Query Frame = 0 
Query:  107 DRGADHRTVNAYGCNAAHWCGLSGDVEVCRWLARSVQEGGAGGLDWAKTNSQGHTICHKAALXXXXXXXXXXRRQTEVGVVPVRAWGLDDGGYTPAKVARLAGHIDLAEWL 217
            D G D + +N +GC A HW  L GD+ + RWL R        GLD    N QGH+  HKAA                V V  V    LD GGY+PA +A++  H +LA WL
Sbjct:    1 DAGCDWQAINDWGCTAVHWAALQGDLPMLRWLRRL-------GLDPGHANRQGHSALHKAAYKGHSAVVHWL-----VDVAGVDPRPLDRGGYSPAVIAKMQHHTELAGWL 99
[Close]
BLAST of mRNA_H-elongata_contig107718.634.1 vs. uniprot
Match: A0A7S2VIJ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2VIJ4_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.560e-11
Identity = 45/147 (30.61%), Postives = 70/147 (47.62%), Query Frame = 0 
Query:   29 RGEGRTALHWAARGGHEEICHLLLETPRPVEPGGSGSRGCNGDRACSYLCADVAATEGTTPFHWAAWGAHLSTCQLLLD-RGADHRTVNAYGCNAAHWCGLS-------GDVEVCRWLARSVQEGGAGGLDWAKTNSQGHTICHKAA 167
            R +G+TALH+AAR G  E+  L+L                           +V++ +GTTP H A +G ++ST + L+   G+D   +N + C AAH+  +S         + +C++L R        G+D+     QGHT  HKAA
Sbjct:  322 RRDGKTALHYAARNGRNEMIDLILSKKDAPS-------------------VNVSSGDGTTPLHMACYGGYVSTVKRLVQTHGSDALAMNDWDCGAAHFAAMSLGKEGTDAVIALCKYLKRHC------GVDFTSRQKQGHTPLHKAA 443
[Close]
BLAST of mRNA_H-elongata_contig107718.634.1 vs. uniprot
Match: A0A812U3K0_9DINO (Rai14 protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812U3K0_9DINO)

HSP 1 Score: 72.8 bits (177), Expect = 2.610e-11
Identity = 51/175 (29.14%), Postives = 67/175 (38.29%), Query Frame = 0 
Query:   13 LIECGLDPGRACPSRGRGEGRTALHWAARGGHEEICHLLLETPRPVEPGGSGSRGCNGDR-----------------ACSYLCADVAATEGTTPFHWAAWGAHLSTCQLLLDRGADHRTVNAYGCNAAHWC----GLSGDVEVCRWLARSVQEGGAGGLDWAKTNSQGHTICHKA 166
            L+  G D  +A   RG G     LHWAA GGH ++C  LL   +      +                          A      D A   G TP   AAW  H++ C +L+ R AD    N++GCNA H      G S  +E+  +L  S  + G         N  GH   HKA
Sbjct:  188 LVVAGSDATKATDHRGNG----VLHWAAGGGHVDVCEYLLHELKMDARARTSKXXXXXXXXXXXXXXXXXXXXXXLDAAGDDFVDAATDGGDTPLMLAAWQGHITCCSILVSRRADVHHTNSWGCNAMHKASRMDGASSSLEMLEYLTHSRVDAGL-------VNCNGHNSLHKA 351
[Close]
BLAST of mRNA_H-elongata_contig107718.634.1 vs. uniprot
Match: A0A024T8V0_9STRA (Fe2OG dioxygenase domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T8V0_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 4.040e-11
Identity = 39/91 (42.86%), Postives = 50/91 (54.95%), Query Frame = 0 
Query:   79 ADVAATEGTTPFHWAAWGAHLSTCQLLLDRGADHRTVNAYGCNAAHWCGLS--GDVEVCRWLARSVQEGGAGGLDWAKTNSQGHTICHKAA 167
            A+  A +GTTPFH A W  H STC LL+  GAD   VN +GCNA  W   S  G++ +  +L   +Q      LD+ + NS G    HKAA
Sbjct:  366 ANTPAGDGTTPFHLAVWQNHQSTCALLVQLGADPHAVNRHGCNACMWASQSSAGNITMLEYLC-GLQ------LDFERINSNGQGCLHKAA 449
[Close]
BLAST of mRNA_H-elongata_contig107718.634.1 vs. uniprot
Match: W4FBF0_9STRA (P4Hc domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FBF0_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 7.390e-11
Identity = 37/90 (41.11%), Postives = 49/90 (54.44%), Query Frame = 0 
Query:   80 DVAATEGTTPFHWAAWGAHLSTCQLLLDRGADHRTVNAYGCNAAHWCGLS--GDVEVCRWLARSVQEGGAGGLDWAKTNSQGHTICHKAA 167
            D  A +GTTPFH A W  H  TC LLL  GAD   VN++GCNA  W   S  G+V +  +L++ +       +D  + N+ G    HKAA
Sbjct:  365 DTPAVDGTTPFHLAVWQNHQRTCALLLQLGADPHVVNSHGCNACMWAAQSSVGNVAMLDFLSKLL-------VDVERINANGQGCLHKAA 447
[Close]
BLAST of mRNA_H-elongata_contig107718.634.1 vs. uniprot
Match: A0A7S3AG66_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AG66_9EUKA)

HSP 1 Score: 67.4 bits (163), Expect = 1.250e-10
Identity = 45/119 (37.82%), Postives = 55/119 (46.22%), Query Frame = 0 
Query:  109 GADHRTVNAYGCNAAHWCGLSGD---VEVCRWLARSVQEGGAGGLDWAKTNSQGHTICHKAALXXXXXXXXXXRRQTEVGVVPVRAWGLDDGGYTPAKVARLAGHIDLAEWLEGIAIGT 224
            GAD   +N+YGCNA  W   +     +  CRWL R        GLD A  N  GH+  HKAA+              EVG+  V     D  G TPA +ARL GH +LA+ LE     T
Sbjct:    3 GADLHAINSYGCNAIQWAAQADPDHGIRTCRWLQRR-------GLDLALLNRNGHSALHKAAVKGRREVCEWLLSD-EVGL-GVPHLQPDGDGNTPALMARLEGHTELADLLESAVADT 112
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig107718.634.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D7G9I0_ECTSI5.060e-7356.47C2H2 zinc finger, ankyrin repeat protein n=1 Tax=E... [more]
A0A6H5K2T6_9PHAE5.820e-5349.78C2H2-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7R9TTM5_MICPS1.650e-2233.78Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
C1N3W7_MICPC7.530e-2133.33Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
A0A7S1X5V7_9CHLO4.110e-1538.74Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A7S2VIJ4_9STRA1.560e-1130.61Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A812U3K0_9DINO2.610e-1129.14Rai14 protein n=1 Tax=Symbiodinium sp. CCMP2456 Ta... [more]
A0A024T8V0_9STRA4.040e-1142.86Fe2OG dioxygenase domain-containing protein n=2 Ta... [more]
W4FBF0_9STRA7.390e-1141.11P4Hc domain-containing protein n=2 Tax=Aphanomyces... [more]
A0A7S3AG66_9EUKA1.250e-1037.82Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 101..115
score: 33.6
coord: 32..47
score: 48.09
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 85..117
e-value: 0.0032
score: 26.7
coord: 118..152
e-value: 3200.0
score: 1.2
coord: 31..60
e-value: 0.0023
score: 27.2
coord: 158..186
e-value: 1100.0
score: 4.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 85..117
score: 11.247
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 31..53
score: 10.072
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 9..221
e-value: 2.6E-30
score: 107.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 12..217
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 11..113
e-value: 1.9E-12
score: 47.6
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 31..178
score: 16.361
NoneNo IPR availablePANTHERPTHR24178FAMILY NOT NAMEDcoord: 13..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig107718contigH-elongata_contig107718:214..1670 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig107718.634.1mRNA_H-elongata_contig107718.634.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig107718 214..1670 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig107718.634.1 ID=prot_H-elongata_contig107718.634.1|Name=mRNA_H-elongata_contig107718.634.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=228bp
MVTKRIADHRYLLIECGLDPGRACPSRGRGEGRTALHWAARGGHEEICHL
LLETPRPVEPGGSGSRGCNGDRACSYLCADVAATEGTTPFHWAAWGAHLS
TCQLLLDRGADHRTVNAYGCNAAHWCGLSGDVEVCRWLARSVQEGGAGGL
DWAKTNSQGHTICHKAALKGHKGLLEWLRRQTEVGVVPVRAWGLDDGGYT
PAKVARLAGHIDLAEWLEGIAIGTATAD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom