prot_H-elongata_contig107685.632.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig107685.632.1
Unique Nameprot_H-elongata_contig107685.632.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length239
Homology
BLAST of mRNA_H-elongata_contig107685.632.1 vs. uniprot
Match: D8LID0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LID0_ECTSI)

HSP 1 Score: 282 bits (721), Expect = 2.620e-84
Identity = 168/270 (62.22%), Postives = 186/270 (68.89%), Query Frame = 0
Query:    1 MMFTAVTDDGVSLGSERGSELMMEGADPSCPLCNVAYEEGSDLCLLPCLHVFHENCIHKWCNRHIVCPLCKRHLEAPEPLHTLPGY----GGGMAQSEP----VGNGHDATGRQTWGHMLGTAAPGPASGHGSARGLGGTRSDDGLWNDRVLNAAQRQMRGG-HNRVTSFSSETRRHNSARGRTG---------GPPQSSSAGTSV-VGRSQSINTSSARVHQGFQRTRSSSF-----------STTVPERGRT-LGRVAHGTAPHRGGA 239
            MMFTAVTDDGVSLGSERGSELMM+GADPSCPLCN AY EG++LCLLPCLHVFH+ CI+KWCNRHIVCPLCKRHLEA EPLHTL       GG   QSEP     GNGH    R  W  +LG  APGPAS HGS RGLGGTRS+DG+WNDRVLNAAQ+Q  GG HNRVTSFSSETRR N+ARGR G         GPP SSSAG  +   R QS++ S+     G+Q+                 + T  +RGR   GRVAHGTA HR  A
Sbjct:  338 MMFTAVTDDGVSLGSERGSELMMDGADPSCPLCNKAYVEGAELCLLPCLHVFHKTCINKWCNRHIVCPLCKRHLEAAEPLHTLTASYNHPGGNAVQSEPGHRGYGNGHQ---RHQWRGVLGNTAPGPASAHGSERGLGGTRSEDGMWNDRVLNAAQQQQMGGKHNRVTSFSSETRRSNNARGRPGERVGSGRGGGPPHSSSAGAGMGPQRPQSVSGSA-----GWQQXXXXXXXXXXXXXXXXTTATEQQRGRGGSGRVAHGTARHRSSA 599          
BLAST of mRNA_H-elongata_contig107685.632.1 vs. uniprot
Match: A0A6H5JTX8_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX8_9PHAE)

HSP 1 Score: 271 bits (692), Expect = 3.480e-80
Identity = 164/272 (60.29%), Postives = 176/272 (64.71%), Query Frame = 0
Query:    1 MMFTAVTDDGVSLGSERGSELMMEGADPSCPLCNVAYEEGSDLCLLPCLHVFHENCIHKWCNRHIVCPLCKRHLEAPEPLHTLPGY----GGGMAQSEP----VGNGHDATGRQTWGHMLGTAAPGPASGHGSARGLGGTRSDDGLWNDRVLNAAQRQMRGG-HNRVTSFSSETRRHNSARGRTG---------GPPQSSSAGTSVVG-RSQSINTSSARVHQGFQRTRSSSFST-------------TVPERGRT-LGRVAHGTAPHRGGA 239
            MMFTAVTDDGVSLGSERGSELMM+GADPSCPLCN  Y EG++LCLLPCLHVFH+ CI+KWCNRHIVCPLCKRHLEA EPLHTL       G    QSEP     GNG     R  W  MLG AAPGPAS HGS RGLGGTRS+DG+WNDRVLNAAQRQ  GG HNRVTSFSSETRR N+ARGR G         GPP SSS        R  S++ S+ R                            T  +RGR   GRVAHGTA HR  A
Sbjct:  336 MMFTAVTDDGVSLGSERGSELMMDGADPSCPLCNKVYVEGAELCLLPCLHVFHKTCINKWCNRHIVCPLCKRHLEAAEPLHTLTASYNHPGDNTVQSEPGHRGYGNGQQ---RHQWRGMLGNAAPGPASAHGSERGLGGTRSEDGMWNDRVLNAAQRQQMGGKHNRVTSFSSETRRSNNARGRPGERAGSGRGGGPPHSSSXXXXXXXXRPHSVSGSTGRQQXXXXXXXXXXXXXXXXXXXXXXXXXXTEQQRGRGGSGRVAHGTARHRSSA 604          
BLAST of mRNA_H-elongata_contig107685.632.1 vs. uniprot
Match: A0A7S0UHT1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UHT1_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 1.680e-9
Identity = 31/72 (43.06%), Postives = 43/72 (59.72%), Query Frame = 0
Query:    3 FTAVTDDGVSLGSERGSELMMEGADPSCPLCNVAYEEGSDLCLLPCLHVFHENCIHKWCNRHIVCPLCKRHL 74
            F + T  G   GS+ G  L  E  +P+C +C   YE+G +L +LPC HVFHE+CI  W + ++ CPLC   L
Sbjct:  252 FKSPTSHGNLFGSDGGKTLDEE--EPTCSVCLCEYEKGDNLIMLPCKHVFHEDCIKSWTDNNLRCPLCNADL 321          
BLAST of mRNA_H-elongata_contig107685.632.1 vs. uniprot
Match: A0A1S6GLJ1_9POAL (E3 ubiquitin protein ligase RIE1-like protein (Fragment) n=1 Tax=Eleocharis dulcis TaxID=110284 RepID=A0A1S6GLJ1_9POAL)

HSP 1 Score: 60.1 bits (144), Expect = 8.530e-9
Identity = 23/45 (51.11%), Postives = 29/45 (64.44%), Query Frame = 0
Query:   30 CPLCNVAYEEGSDLCLLPCLHVFHENCIHKWCNRHIVCPLCKRHL 74
            C +C   YE+G++LC LPC H FH  CI KW   H  CPLCK ++
Sbjct:    3 CCICLATYEDGTELCALPCNHHFHSTCIIKWLRIHATCPLCKYNI 47          
BLAST of mRNA_H-elongata_contig107685.632.1 vs. uniprot
Match: A0A0K9P9K8_ZOSMR (Putative Ring finger protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9P9K8_ZOSMR)

HSP 1 Score: 64.3 bits (155), Expect = 2.240e-8
Identity = 29/74 (39.19%), Postives = 42/74 (56.76%), Query Frame = 0
Query:    3 FTAVTDDGV--SLGSERGSELMMEGADPSCPLCNVAYEEGSDLCLLPCLHVFHENCIHKWCNRHIVCPLCKRHL 74
            F +  D G+    G+E   E  +   D  C +C  AY++G++LC LPC H FH NC+ KW   +  CPLCK ++
Sbjct:  284 FKSDLDGGIMTECGTETPYENALSAEDAECCICLSAYDDGAELCELPCSHHFHSNCVVKWLYINATCPLCKYNI 357          
BLAST of mRNA_H-elongata_contig107685.632.1 vs. uniprot
Match: A0A383VIV6_TETOB (RING-type domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VIV6_TETOB)

HSP 1 Score: 62.4 bits (150), Expect = 5.410e-8
Identity = 26/60 (43.33%), Postives = 35/60 (58.33%), Query Frame = 0
Query:   12 SLGSERGSELMMEGADPSCPLCNVAYEEGSDLCLLPCLHVFHENCIHKWCNRHIVCPLCK 71
            S  S  G E M E   P C +C  A++E   + LLPCLH++HE CI  W  R  +CP+C+
Sbjct:   46 SQNSNDGKETMTEDELPQCVICCCAFQEQEQVKLLPCLHMYHEECIDAWLRRDHICPICQ 105          
BLAST of mRNA_H-elongata_contig107685.632.1 vs. uniprot
Match: A0A7I8IBN1_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8IBN1_SPIIN)

HSP 1 Score: 62.0 bits (149), Expect = 9.970e-8
Identity = 29/68 (42.65%), Postives = 38/68 (55.88%), Query Frame = 0
Query:    4 TAVTDDGVSLGSERGSELMMEGADPSCPLCNVAYEEGSDLCLLPCLHVFHENCIHKWCNRHIVCPLCK 71
            T VTD   ++G     +L     D  C +C   YE+G++LC LPC H FH  CI KW   + +CPLCK
Sbjct:  219 TNVTDTRNTMG-----DLSHSPEDSDCCICLCRYEDGAELCSLPCNHYFHSGCITKWLRINAICPLCK 281          
BLAST of mRNA_H-elongata_contig107685.632.1 vs. uniprot
Match: A0A7I8JYG6_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8JYG6_SPIIN)

HSP 1 Score: 61.6 bits (148), Expect = 1.840e-7
Identity = 25/53 (47.17%), Postives = 32/53 (60.38%), Query Frame = 0
Query:   19 SELMMEGADPSCPLCNVAYEEGSDLCLLPCLHVFHENCIHKWCNRHIVCPLCK 71
            S+L     D  C +C   YE+G++LC LPC H FH  CI KW   + +CPLCK
Sbjct:  302 SDLSHSPEDSDCCICLCRYEDGAELCSLPCNHYFHSGCITKWLRINAICPLCK 354          
BLAST of mRNA_H-elongata_contig107685.632.1 vs. uniprot
Match: A0A8J5XKQ2_DIALT (RING-type domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XKQ2_DIALT)

HSP 1 Score: 62.0 bits (149), Expect = 1.920e-7
Identity = 27/70 (38.57%), Postives = 40/70 (57.14%), Query Frame = 0
Query:    8 DDGVSLGSERGSELMMEGADPSCPLCNVAYEEGSDLCLLPCLHVFHENCIHKWCNRHIVCPLCKRHLEAP 77
            D   +  SER  E  ++ A  SC +C + +EE  ++C+LPC HVFH  CIH+W  +   CP C+  +  P
Sbjct:  593 DAPAARASERDDERSLD-ASVSCVVCLMEFEEEVEVCVLPCRHVFHTECIHRWLRQEGSCPQCRHRIAPP 661          
BLAST of mRNA_H-elongata_contig107685.632.1 vs. uniprot
Match: A0A7J7CFU2_TRIWF (E3 ubiquitin-protein ligase n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CFU2_TRIWF)

HSP 1 Score: 60.8 bits (146), Expect = 3.510e-7
Identity = 26/58 (44.83%), Postives = 37/58 (63.79%), Query Frame = 0
Query:   14 GSERGSELMMEGADPSCPLCNVAYEEGSDLCLLPCLHVFHENCIHKWCNRHIVCPLCK 71
            G++  S+ ++   D  C +C  AY++G+DL  LPCLH FH  CI KW + +  CPLCK
Sbjct:  312 GTDMPSKRILSEEDTECCICLSAYDDGTDLRELPCLHHFHCTCIDKWLHINATCPLCK 369          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig107685.632.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LID0_ECTSI2.620e-8462.22RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JTX8_9PHAE3.480e-8060.29RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S0UHT1_9STRA1.680e-943.06Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit... [more]
A0A1S6GLJ1_9POAL8.530e-951.11E3 ubiquitin protein ligase RIE1-like protein (Fra... [more]
A0A0K9P9K8_ZOSMR2.240e-839.19Putative Ring finger protein n=1 Tax=Zostera marin... [more]
A0A383VIV6_TETOB5.410e-843.33RING-type domain-containing protein n=1 Tax=Tetrad... [more]
A0A7I8IBN1_SPIIN9.970e-842.65Hypothetical protein n=1 Tax=Spirodela intermedia ... [more]
A0A7I8JYG6_SPIIN1.840e-747.17Hypothetical protein n=1 Tax=Spirodela intermedia ... [more]
A0A8J5XKQ2_DIALT1.920e-738.57RING-type domain-containing protein n=2 Tax=Diacro... [more]
A0A7J7CFU2_TRIWF3.510e-744.83E3 ubiquitin-protein ligase n=1 Tax=Tripterygium w... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 30..70
e-value: 0.0014
score: 27.9
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 29..71
e-value: 4.5E-9
score: 36.5
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 30..71
score: 12.106
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 13..78
e-value: 3.5E-14
score: 53.7
NoneNo IPR availablePANTHERPTHR45977:SF4TARGET OF ERK KINASE MPK-1coord: 21..75
NoneNo IPR availablePANTHERPTHR45977FAMILY NOT NAMEDcoord: 21..75
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 27..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig107685contigH-elongata_contig107685:20..1413 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig107685.632.1mRNA_H-elongata_contig107685.632.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig107685 20..1413 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig107685.632.1 ID=prot_H-elongata_contig107685.632.1|Name=mRNA_H-elongata_contig107685.632.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=239bp
MMFTAVTDDGVSLGSERGSELMMEGADPSCPLCNVAYEEGSDLCLLPCLH
VFHENCIHKWCNRHIVCPLCKRHLEAPEPLHTLPGYGGGMAQSEPVGNGH
DATGRQTWGHMLGTAAPGPASGHGSARGLGGTRSDDGLWNDRVLNAAQRQ
MRGGHNRVTSFSSETRRHNSARGRTGGPPQSSSAGTSVVGRSQSINTSSA
RVHQGFQRTRSSSFSTTVPERGRTLGRVAHGTAPHRGGA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD